#------------------------------------------------------------------------------
#$Date: 2025-08-18 17:20:24 +0300 (Mon, 18 Aug 2025) $
#$Revision: 301776 $
#$URL: file:///home/coder/svn-repositories/cod/cif/1/51/49/1514955.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_1514955
loop_
_publ_author_name
'Dasgupta, Suvankar'
'Wu, Jishan'
_publ_section_title
;
 Formation of [2]rotaxanes by encircling [20], [21] and [22]crown ethers
 onto the dibenzylammonium dumbbell
;
_journal_issue                   2
_journal_name_full               'Chemical Science'
_journal_page_first              425
_journal_paper_doi               10.1039/c1sc00613d
_journal_volume                  3
_journal_year                    2012
_chemical_formula_sum            'C29 H46 F6 N O6 P'
_chemical_formula_weight         649.64
_space_group_IT_number           14
_symmetry_cell_setting           monoclinic
_symmetry_space_group_name_Hall  '-P 2ybc'
_symmetry_space_group_name_H-M   'P 1 21/c 1'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_atom_sites_solution_secondary   difmap
_audit_creation_method           SHELXL-97
_cell_angle_alpha                90.00
_cell_angle_beta                 104.633(2)
_cell_angle_gamma                90.00
_cell_formula_units_Z            4
_cell_length_a                   15.9763(8)
_cell_length_b                   13.6353(7)
_cell_length_c                   15.3457(7)
_cell_measurement_reflns_used    3575
_cell_measurement_temperature    223(2)
_cell_measurement_theta_max      22.39
_cell_measurement_theta_min      2.60
_cell_volume                     3234.5(3)
_computing_cell_refinement       'Bruker SMART'
_computing_data_collection       'Bruker SMART'
_computing_data_reduction        'Bruker SAINT'
_computing_molecular_graphics    'Bruker SHELXTL'
_computing_publication_material  'Bruker SHELXTL'
_computing_structure_refinement  'SHELXL-97 (Sheldrick, 1997)'
_computing_structure_solution    'SHELXS-97 (Sheldrick, 1990)'
_diffrn_ambient_temperature      223(2)
_diffrn_measured_fraction_theta_full 0.997
_diffrn_measured_fraction_theta_max 0.997
_diffrn_measurement_device_type  'CCD area detector'
_diffrn_measurement_method       'phi and omega scans'
_diffrn_radiation_monochromator  graphite
_diffrn_radiation_source         'fine-focus sealed tube'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0401
_diffrn_reflns_av_sigmaI/netI    0.0501
_diffrn_reflns_limit_h_max       20
_diffrn_reflns_limit_h_min       -20
_diffrn_reflns_limit_k_max       17
_diffrn_reflns_limit_k_min       -17
_diffrn_reflns_limit_l_max       19
_diffrn_reflns_limit_l_min       -16
_diffrn_reflns_number            22527
_diffrn_reflns_theta_full        27.48
_diffrn_reflns_theta_max         27.48
_diffrn_reflns_theta_min         1.32
_exptl_absorpt_coefficient_mu    0.160
_exptl_absorpt_correction_T_max  0.9779
_exptl_absorpt_correction_T_min  0.9100
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   'Sadabs, (Sheldrick 2001)'
_exptl_crystal_colour            COLOURLESS
_exptl_crystal_density_diffrn    1.334
_exptl_crystal_density_meas      ?
_exptl_crystal_density_method    'not measured'
_exptl_crystal_description       BLOCK
_exptl_crystal_F_000             1376
_exptl_crystal_size_max          0.60
_exptl_crystal_size_mid          0.20
_exptl_crystal_size_min          0.14
_refine_diff_density_max         0.469
_refine_diff_density_min         -0.305
_refine_diff_density_rms         0.056
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.070
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     388
_refine_ls_number_reflns         7394
_refine_ls_number_restraints     0
_refine_ls_restrained_S_all      1.070
_refine_ls_R_factor_all          0.0947
_refine_ls_R_factor_gt           0.0685
_refine_ls_shift/su_max          0.000
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'calc w=1/[σ²(Fo²)+(0.0782P)²+1.4673P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1630
_refine_ls_wR_factor_ref         0.1806
_reflns_number_gt                5387
_reflns_number_total             7394
_reflns_threshold_expression     >2sigma(I)
_cod_data_source_file            c1sc00613d.txt
_cod_data_source_block           b114a
_cod_depositor_comments
;
The following automatic conversions were performed:

'_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic'
according to
/usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from
2011-04-26.

'_exptl_absorpt_correction_type' value 'Multi-scan'
changed to 'multi-scan' according to
/usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26.

Automatic conversion script
Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius 

The following automatic conversions were performed:

'_exptl_crystal_density_meas' value 'Not Measured' was changed to '?'
- the value is perceived as not measured.

Automatic conversion script
Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas 
;
_cod_original_sg_symbol_H-M      P2(1)/c
_cod_database_code               1514955
loop_
_symmetry_equiv_pos_as_xyz
'x, y, z'
'-x, y+1/2, -z+1/2'
'-x, -y, -z'
'x, -y-1/2, z-1/2'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_symmetry_multiplicity
_atom_site_calc_flag
_atom_site_refinement_flags
N1 N 0.75052(11) 0.14425(14) 0.61333(12) 0.0280(4) Uani 1 1 d .
H1A H 0.7933 0.0984 0.6251 0.034 Uiso 1 1 calc R
H1B H 0.7638 0.1900 0.6578 0.034 Uiso 1 1 calc R
O1 O 0.55041(10) 0.31326(13) 0.50971(11) 0.0385(4) Uani 1 1 d .
O2 O 0.68299(12) 0.33413(14) 0.68444(13) 0.0505(5) Uani 1 1 d .
O3 O 0.83903(11) 0.23570(13) 0.77233(12) 0.0410(4) Uani 1 1 d .
O4 O 0.90740(11) 0.05728(12) 0.70731(11) 0.0390(4) Uani 1 1 d .
O5 O 0.81801(10) -0.05375(13) 0.55958(11) 0.0375(4) Uani 1 1 d .
O6 O 0.65863(11) -0.01581(13) 0.41120(11) 0.0390(4) Uani 1 1 d .
C1 C 0.83258(15) 0.24835(18) 0.53254(15) 0.0315(5) Uani 1 1 d .
C2 C 0.83310(18) 0.3495(2) 0.53301(18) 0.0423(6) Uani 1 1 d .
H2 H 0.7808 0.3837 0.5263 0.051 Uiso 1 1 calc R
C3 C 0.9096(2) 0.4017(2) 0.5433(2) 0.0568(8) Uani 1 1 d .
H3 H 0.9089 0.4707 0.5434 0.068 Uiso 1 1 calc R
C4 C 0.9857(2) 0.3526(3) 0.5532(2) 0.0623(9) Uani 1 1 d .
H4 H 1.0375 0.3878 0.5598 0.075 Uiso 1 1 calc R
C5 C 0.98720(19) 0.2522(3) 0.5536(2) 0.0620(9) Uani 1 1 d .
H5 H 1.0401 0.2187 0.5620 0.074 Uiso 1 1 calc R
C6 C 0.91048(18) 0.2000(2) 0.54148(19) 0.0475(7) Uani 1 1 d .
H6 H 0.9115 0.1311 0.5393 0.057 Uiso 1 1 calc R
C7 C 0.74987(15) 0.19275(19) 0.52591(15) 0.0351(5) Uani 1 1 d .
H7A H 0.7007 0.2380 0.5095 0.042 Uiso 1 1 calc R
H7B H 0.7428 0.1430 0.4785 0.042 Uiso 1 1 calc R
C8 C 0.66764(14) 0.09594(18) 0.61672(15) 0.0299(5) Uani 1 1 d .
H8A H 0.6530 0.0458 0.5696 0.036 Uiso 1 1 calc R
H8B H 0.6211 0.1448 0.6049 0.036 Uiso 1 1 calc R
C9 C 0.67405(13) 0.04925(17) 0.70684(15) 0.0289(5) Uani 1 1 d .
C10 C 0.70558(15) -0.04515(18) 0.72506(17) 0.0351(5) Uani 1 1 d .
H10 H 0.7233 -0.0809 0.6805 0.042 Uiso 1 1 calc R
C11 C 0.71120(17) -0.0873(2) 0.80845(19) 0.0462(7) Uani 1 1 d .
H11 H 0.7335 -0.1511 0.8205 0.055 Uiso 1 1 calc R
C12 C 0.68430(18) -0.0362(2) 0.87379(18) 0.0485(7) Uani 1 1 d .
H12 H 0.6882 -0.0651 0.9303 0.058 Uiso 1 1 calc R
C13 C 0.65156(18) 0.0575(2) 0.85637(17) 0.0458(7) Uani 1 1 d .
H13 H 0.6325 0.0922 0.9007 0.055 Uiso 1 1 calc R
C14 C 0.64685(16) 0.10023(19) 0.77358(16) 0.0372(6) Uani 1 1 d .
H14 H 0.6251 0.1643 0.7621 0.045 Uiso 1 1 calc R
C15 C 0.54468(17) 0.3705(2) 0.58463(18) 0.0425(6) Uani 1 1 d .
H15A H 0.5205 0.3306 0.6255 0.051 Uiso 1 1 calc R
H15B H 0.5054 0.4257 0.5641 0.051 Uiso 1 1 calc R
C16 C 0.63094(17) 0.40868(19) 0.63414(18) 0.0404(6) Uani 1 1 d .
H16A H 0.6604 0.4365 0.5910 0.048 Uiso 1 1 calc R
H16B H 0.6231 0.4613 0.6749 0.048 Uiso 1 1 calc R
C17 C 0.74098(19) 0.3667(3) 0.7665(2) 0.0629(9) Uani 1 1 d .
H17A H 0.7219 0.3395 0.8174 0.075 Uiso 1 1 calc R
H17B H 0.7376 0.4383 0.7698 0.075 Uiso 1 1 calc R
C18 C 0.83115(19) 0.3386(2) 0.7755(2) 0.0512(7) Uani 1 1 d .
H18A H 0.8519 0.3683 0.7267 0.061 Uiso 1 1 calc R
H18B H 0.8671 0.3632 0.8329 0.061 Uiso 1 1 calc R
C19 C 0.92645(16) 0.2024(2) 0.79709(19) 0.0450(6) Uani 1 1 d .
H19A H 0.9553 0.2272 0.8571 0.054 Uiso 1 1 calc R
H19B H 0.9575 0.2275 0.7542 0.054 Uiso 1 1 calc R
C20 C 0.92853(18) 0.0928(2) 0.79744(18) 0.0470(7) Uani 1 1 d .
H20A H 0.9863 0.0699 0.8292 0.056 Uiso 1 1 calc R
H20B H 0.8869 0.0674 0.8291 0.056 Uiso 1 1 calc R
C21 C 0.92226(17) -0.04522(19) 0.70193(19) 0.0439(6) Uani 1 1 d .
H21A H 0.8838 -0.0817 0.7309 0.053 Uiso 1 1 calc R
H21B H 0.9822 -0.0607 0.7335 0.053 Uiso 1 1 calc R
C22 C 0.90572(16) -0.0747(2) 0.60571(19) 0.0425(6) Uani 1 1 d .
H22A H 0.9449 -0.0390 0.5771 0.051 Uiso 1 1 calc R
H22B H 0.9169 -0.1451 0.6018 0.051 Uiso 1 1 calc R
C23 C 0.79432(18) -0.0985(2) 0.47286(18) 0.0461(7) Uani 1 1 d .
H23A H 0.8205 -0.1638 0.4764 0.055 Uiso 1 1 calc R
H23B H 0.8171 -0.0593 0.4305 0.055 Uiso 1 1 calc R
C24 C 0.69861(18) -0.1077(2) 0.43827(18) 0.0433(6) Uani 1 1 d .
H24A H 0.6856 -0.1527 0.3868 0.052 Uiso 1 1 calc R
H24B H 0.6745 -0.1357 0.4855 0.052 Uiso 1 1 calc R
C25 C 0.57301(17) -0.0279(2) 0.35545(18) 0.0430(6) Uani 1 1 d .
H25A H 0.5376 -0.0633 0.3888 0.052 Uiso 1 1 calc R
H25B H 0.5748 -0.0667 0.3022 0.052 Uiso 1 1 calc R
C26 C 0.53297(16) 0.0709(2) 0.32647(17) 0.0410(6) Uani 1 1 d .
H26A H 0.5728 0.1087 0.3004 0.049 Uiso 1 1 calc R
H26B H 0.4796 0.0609 0.2791 0.049 Uiso 1 1 calc R
C27 C 0.51200(16) 0.1301(2) 0.40124(16) 0.0393(6) Uani 1 1 d .
H27A H 0.5645 0.1361 0.4504 0.047 Uiso 1 1 calc R
H27B H 0.4692 0.0941 0.4245 0.047 Uiso 1 1 calc R
C28 C 0.47718(17) 0.2321(2) 0.37381(18) 0.0462(7) Uani 1 1 d .
H28A H 0.5163 0.2654 0.3435 0.055 Uiso 1 1 calc R
H28B H 0.4207 0.2261 0.3304 0.055 Uiso 1 1 calc R
C29 C 0.46727(16) 0.2941(2) 0.45132(19) 0.0468(7) Uani 1 1 d .
H29A H 0.4389 0.3561 0.4288 0.056 Uiso 1 1 calc R
H29B H 0.4311 0.2598 0.4845 0.056 Uiso 1 1 calc R
P1 P 0.19855(5) 0.34553(5) 0.32534(5) 0.0466(2) Uani 1 1 d .
F1 F 0.14070(17) 0.42789(19) 0.2700(2) 0.1202(10) Uani 1 1 d .
F2 F 0.12858(14) 0.32606(17) 0.3808(2) 0.0985(8) Uani 1 1 d .
F3 F 0.25554(13) 0.26037(18) 0.37871(18) 0.0964(8) Uani 1 1 d .
F4 F 0.26992(15) 0.36613(17) 0.27265(15) 0.0875(7) Uani 1 1 d .
F5 F 0.2431(2) 0.4220(2) 0.39727(17) 0.1184(10) Uani 1 1 d .
F6 F 0.1530(2) 0.2681(2) 0.2541(2) 0.1392(12) Uani 1 1 d .
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C8 N1 C7 114.97(17)
C15 O1 C29 111.80(19)
C16 O2 C17 114.7(2)
C18 O3 C19 113.4(2)
C20 O4 C21 112.83(19)
C23 O5 C22 111.86(18)
C24 O6 C25 111.44(19)
C2 C1 C6 118.2(2)
C2 C1 C7 120.5(2)
C6 C1 C7 121.3(2)
C1 C2 C3 121.1(3)
C4 C3 C2 119.7(3)
C3 C4 C5 120.4(3)
C4 C5 C6 119.9(3)
C1 C6 C5 120.7(3)
N1 C7 C1 110.84(18)
N1 C8 C9 111.38(17)
C10 C9 C14 118.7(2)
C10 C9 C8 121.1(2)
C14 C9 C8 120.2(2)
C9 C10 C11 120.5(2)
C12 C11 C10 120.3(3)
C11 C12 C13 120.0(2)
C12 C13 C14 119.8(2)
C13 C14 C9 120.7(2)
O1 C15 C16 111.5(2)
O2 C16 C15 111.6(2)
O2 C17 C18 113.9(2)
O3 C18 C17 110.6(3)
O3 C19 C20 109.8(2)
O4 C20 C19 109.7(2)
O4 C21 C22 109.4(2)
O5 C22 C21 110.1(2)
O5 C23 C24 112.0(2)
O6 C24 C23 112.1(2)
O6 C25 C26 110.1(2)
C27 C26 C25 114.4(2)
C26 C27 C28 114.6(2)
C29 C28 C27 113.7(2)
O1 C29 C28 109.5(2)
F5 P1 F6 179.08(18)
F5 P1 F1 90.33(19)
F6 P1 F1 89.92(18)
F5 P1 F3 91.41(17)
F6 P1 F3 88.34(17)
F1 P1 F3 178.26(18)
F5 P1 F4 89.09(13)
F6 P1 F4 91.79(18)
F1 P1 F4 89.90(14)
F3 P1 F4 90.01(12)
F5 P1 F2 89.39(15)
F6 P1 F2 89.73(18)
F1 P1 F2 90.67(14)
F3 P1 F2 89.47(12)
F4 P1 F2 178.38(15)
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
N1 C8 1.491(3)
N1 C7 1.493(3)
O1 C15 1.412(3)
O1 C29 1.426(3)
O2 C16 1.413(3)
O2 C17 1.433(3)
O3 C18 1.410(3)
O3 C19 1.426(3)
O4 C20 1.423(3)
O4 C21 1.424(3)
O5 C23 1.426(3)
O5 C22 1.430(3)
O6 C24 1.419(3)
O6 C25 1.428(3)
C1 C2 1.380(4)
C1 C6 1.384(3)
C1 C7 1.504(3)
C2 C3 1.388(4)
C3 C4 1.363(5)
C4 C5 1.369(5)
C5 C6 1.389(4)
C8 C9 1.502(3)
C9 C10 1.385(3)
C9 C14 1.395(3)
C10 C11 1.385(4)
C11 C12 1.376(4)
C12 C13 1.381(4)
C13 C14 1.382(4)
C15 C16 1.489(4)
C17 C18 1.463(4)
C19 C20 1.495(4)
C21 C22 1.488(4)
C23 C24 1.492(4)
C25 C26 1.509(4)
C26 C27 1.508(4)
C27 C28 1.518(4)
C28 C29 1.500(4)
P1 F5 1.554(2)
P1 F6 1.561(3)
P1 F1 1.562(2)
P1 F3 1.572(2)
P1 F4 1.581(2)
P1 F2 1.589(2)
loop_
_cod_related_entry_id
_cod_related_entry_database
_cod_related_entry_code
1 PubChem 139042714
