#------------------------------------------------------------------------------
#$Date: 2017-09-02 05:54:10 +0300 (Sat, 02 Sep 2017) $
#$Revision: 200111 $
#$URL: file:///home/coder/svn-repositories/cod/cif/7/04/40/7044087.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_7044087
loop_
_publ_author_name
'Colina-Vegas, Legna'
'Luna, Liany'
'Plutin, Ana'
'Castellano, Eduardo'
'Cominetti, Marcia Regina'
'Batista, Alzir A.'
_publ_section_title
;
 Ru(II)-arene acylthioureas complexes: DNA/HSA-binding, anti-migration and
 cell death in a triple negative breast tumor cell line
;
_journal_name_full               'Dalton Trans.'
_journal_paper_doi               10.1039/C7DT01801K
_journal_year                    2017
_chemical_formula_moiety         'C21 H24 Cl2 N2 O3 Ru S'
_chemical_formula_sum            'C21 H24 Cl2 N2 O3 Ru S'
_chemical_formula_weight         556.45
_space_group_crystal_system      triclinic
_space_group_IT_number           2
_space_group_name_Hall           '-P 1'
_space_group_name_H-M_alt        'P -1'
_symmetry_space_group_name_Hall  '-P 1'
_symmetry_space_group_name_H-M   'P -1'
_atom_sites_solution_hydrogens   mixed
_audit_creation_method           SHELXL-2014/6
_audit_update_record
;
2017-08-30 deposited with the CCDC.
2017-09-01 downloaded from the CCDC.
;
_cell_angle_alpha                87.365(2)
_cell_angle_beta                 83.413(2)
_cell_angle_gamma                76.5380(10)
_cell_formula_units_Z            2
_cell_length_a                   9.6460(3)
_cell_length_b                   11.0190(3)
_cell_length_c                   11.3160(2)
_cell_measurement_reflns_used    15454
_cell_measurement_temperature    293(2)
_cell_measurement_theta_max      27
_cell_measurement_theta_min      2.6
_cell_volume                     1161.77(5)
_computing_cell_refinement       'APEX2 v2014.5-0 (Bruker AXS)'
_computing_data_collection       'APEX2 v2014.5-0 (Bruker AXS)'
_computing_data_reduction        'SAINT V8.34A (Bruker AXS Inc., 2013)'
_computing_publication_material  'WinGX publication routines (Farrugia, 2012)'
_computing_structure_refinement  'SHELXL-2014/6 (Sheldrick, 2014)'
_computing_structure_solution    'SHELXT-2014 (Sheldrick, 2014)'
_diffrn_ambient_temperature      293(2)
_diffrn_detector                 'CCD plate'
_diffrn_detector_area_resol_mean 9
_diffrn_measured_fraction_theta_full 0.995
_diffrn_measured_fraction_theta_max 0.995
_diffrn_measurement_device_type  'Enraf-Nonius CAD4 Diffractometer'
_diffrn_measurement_method       ω/2θ
_diffrn_orient_matrix_type       'by Bruker AXS Collect from scalepack cell'
_diffrn_radiation_monochromator  graphite
_diffrn_radiation_probe          x-ray
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0447
_diffrn_reflns_av_unetI/netI     0.0357
_diffrn_reflns_Laue_measured_fraction_full 0.995
_diffrn_reflns_Laue_measured_fraction_max 0.995
_diffrn_reflns_limit_h_max       12
_diffrn_reflns_limit_h_min       -11
_diffrn_reflns_limit_k_max       14
_diffrn_reflns_limit_k_min       -14
_diffrn_reflns_limit_l_max       14
_diffrn_reflns_limit_l_min       -14
_diffrn_reflns_number            15454
_diffrn_reflns_point_group_measured_fraction_full 0.995
_diffrn_reflns_point_group_measured_fraction_max 0.995
_diffrn_reflns_theta_full        25.242
_diffrn_reflns_theta_max         27.079
_diffrn_reflns_theta_min         2.600
_diffrn_source                   'Enraf Nonius FR590'
_exptl_absorpt_coefficient_mu    1.019
_exptl_absorpt_correction_T_max  0.8535
_exptl_absorpt_correction_T_min  0.6938
_exptl_absorpt_correction_type   gaussian
_exptl_absorpt_process_details
;
Gaussian (Coppens et al., 1965)
a grid of  8 x  8 x  8 =   512 sampling points was used
;
_exptl_crystal_colour            red
_exptl_crystal_density_diffrn    1.591
_exptl_crystal_description       prism
_exptl_crystal_F_000             564
_exptl_crystal_size_max          0.366
_exptl_crystal_size_mid          0.311
_exptl_crystal_size_min          0.160
_refine_diff_density_max         0.506
_refine_diff_density_min         -0.894
_refine_diff_density_rms         0.090
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.151
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     274
_refine_ls_number_reflns         5096
_refine_ls_number_restraints     0
_refine_ls_restrained_S_all      1.151
_refine_ls_R_factor_all          0.0367
_refine_ls_R_factor_gt           0.0322
_refine_ls_shift/su_max          0.001
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0340P)²+0.9592P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.0818
_refine_ls_wR_factor_ref         0.0858
_reflns_Friedel_coverage         0.000
_reflns_number_gt                4645
_reflns_number_total             5096
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            c7dt01801k2.cif
_cod_data_source_block           shelx_CCDC3
_cod_database_code               7044087
_shelx_space_group_comment
;
The symmetry employed for this shelxl refinement is uniquely defined
by the following loop, which should always be used as a source of
symmetry information in preference to the above space-group names.
They are only intended as comments.
;
_shelxl_version_number           2014/6
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x, -y, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
_atom_site_refinement_flags_adp
Ru Ru 0.33090(2) 0.25908(2) 0.47729(2) 0.02633(8) Uani 1 1 d . .
Cl1 Cl 0.57707(7) 0.23660(8) 0.38859(6) 0.04312(17) Uani 1 1 d . .
Cl2 Cl 0.30951(8) 0.10350(6) 0.33942(6) 0.03805(15) Uani 1 1 d . .
S S 0.24143(7) 0.42325(6) 0.33762(6) 0.03493(15) Uani 1 1 d . .
O1 O 0.4546(4) 0.3433(3) -0.0405(2) 0.0783(10) Uani 1 1 d . .
O2 O 0.2030(3) 0.6751(3) -0.0703(2) 0.0682(8) Uani 1 1 d . .
O3 O 0.6537(3) 0.1243(3) -0.0739(2) 0.0680(8) Uani 1 1 d . .
N1 N 0.4172(3) 0.3019(2) 0.1585(2) 0.0414(6) Uani 1 1 d . .
H1 H 0.4463 0.2490 0.2137 0.050 Uiso 1 1 d R U
N2 N 0.2713(3) 0.4884(2) 0.1107(2) 0.0481(6) Uani 1 1 d . .
H2 H 0.3112 0.4746 0.0391 0.058 Uiso 1 1 d R U
C1 C 0.4807(4) 0.2734(3) 0.0444(3) 0.0458(7) Uani 1 1 d . .
C1' C 0.0505(3) 0.1362(3) 0.5762(3) 0.0462(7) Uani 1 1 d . .
H1' H 0.0973 0.0664 0.5243 0.055 Uiso 1 1 calc R U
C2 C 0.5810(3) 0.1533(3) 0.0355(2) 0.0424(6) Uani 1 1 d . .
C2' C -0.0682(4) 0.2183(5) 0.5124(4) 0.0765(13) Uani 1 1 d . .
H2'1 H -0.1337 0.1699 0.4945 0.115 Uiso 1 1 calc R U
H2'2 H -0.0275 0.2509 0.4398 0.115 Uiso 1 1 calc R U
H2'3 H -0.1184 0.2861 0.5625 0.115 Uiso 1 1 calc R U
C3 C 0.6199(4) 0.0604(3) 0.1133(3) 0.0583(9) Uani 1 1 d . .
H3 H 0.5846 0.0575 0.1932 0.070 Uiso 1 1 calc R U
C3' C -0.0071(5) 0.0816(4) 0.6927(4) 0.0743(13) Uani 1 1 d . .
H3'1 H -0.0770 0.0365 0.6774 0.111 Uiso 1 1 calc R U
H3'2 H -0.0509 0.1478 0.7466 0.111 Uiso 1 1 calc R U
H3'3 H 0.0704 0.0259 0.7275 0.111 Uiso 1 1 calc R U
C4 C 0.7252(5) -0.0329(4) 0.0510(4) 0.0692(11) Uani 1 1 d . .
H4 H 0.7731 -0.1089 0.0817 0.083 Uiso 1 1 calc R U
C4' C 0.1641(3) 0.2029(3) 0.6014(2) 0.0326(5) Uani 1 1 d . .
C5 C 0.7420(5) 0.0102(4) -0.0602(4) 0.0692(11) Uani 1 1 d . .
H5 H 0.8058 -0.0323 -0.1206 0.083 Uiso 1 1 calc R U
C5' C 0.3028(3) 0.1307(3) 0.6243(2) 0.0363(6) Uani 1 1 d . .
H5' H 0.3200 0.0440 0.6255 0.044 Uiso 1 1 calc R U
C6' C 0.4127(3) 0.1876(3) 0.6450(2) 0.0382(6) Uani 1 1 d . .
H6' H 0.5015 0.1382 0.6598 0.046 Uiso 1 1 calc R U
C6 C 0.3141(3) 0.4045(2) 0.1934(2) 0.0344(5) Uani 1 1 d . .
C7' C 0.3910(3) 0.3202(3) 0.6438(2) 0.0400(6) Uani 1 1 d . .
C7 C 0.1616(5) 0.6025(3) 0.1317(3) 0.0665(11) Uani 1 1 d . .
H7A H 0.2020 0.6644 0.1653 0.080 Uiso 1 1 calc R U
H7B H 0.0844 0.5859 0.1883 0.080 Uiso 1 1 calc R U
C8' C 0.2561(3) 0.3916(3) 0.6212(2) 0.0400(6) Uani 1 1 d . .
H8' H 0.2396 0.4782 0.6196 0.048 Uiso 1 1 calc R U
C8 C 0.1046(4) 0.6514(3) 0.0181(3) 0.0489(7) Uani 1 1 d . .
C9' C 0.1432(3) 0.3337(3) 0.6003(2) 0.0353(6) Uani 1 1 d . .
H9' H 0.0545 0.3833 0.5858 0.042 Uiso 1 1 calc R U
C9 C -0.0242(4) 0.6742(3) -0.0211(4) 0.0581(9) Uani 1 1 d . .
H9 H -0.1091 0.6641 0.0217 0.070 Uiso 1 1 calc R U
C10' C 0.5110(4) 0.3810(4) 0.6611(3) 0.0636(10) Uani 1 1 d . .
H10A H 0.5986 0.3351 0.6196 0.095 Uiso 1 1 calc R U
H10B H 0.5215 0.3816 0.7444 0.095 Uiso 1 1 calc R U
H10C H 0.4897 0.4652 0.6303 0.095 Uiso 1 1 calc R U
C10 C -0.0065(4) 0.7171(3) -0.1411(4) 0.0605(9) Uani 1 1 d . .
H10 H -0.0778 0.7414 -0.1918 0.073 Uiso 1 1 calc R U
C11 C 0.1294(5) 0.7157(4) -0.1663(4) 0.0698(11) Uani 1 1 d . .
H11 H 0.1705 0.7391 -0.2396 0.084 Uiso 1 1 calc R U
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
Ru Ru -1.2594 0.8363 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C5' Ru C9' 67.93(10)
C5' Ru C8' 80.25(11)
C9' Ru C8' 38.32(11)
C5' Ru C6' 37.46(11)
C9' Ru C6' 80.27(11)
C8' Ru C6' 67.41(11)
C5' Ru C4' 38.39(10)
C9' Ru C4' 37.61(10)
C8' Ru C4' 68.79(11)
C6' Ru C4' 68.74(10)
C5' Ru C7' 68.29(11)
C9' Ru C7' 68.39(11)
C8' Ru C7' 37.15(12)
C6' Ru C7' 37.89(11)
C4' Ru C7' 81.76(10)
C5' Ru S 152.79(8)
C9' Ru S 88.16(7)
C8' Ru S 89.00(8)
C6' Ru S 153.80(8)
C4' Ru S 114.40(7)
C7' Ru S 115.93(8)
C5' Ru Cl2 89.55(8)
C9' Ru Cl2 117.07(8)
C8' Ru Cl2 155.39(9)
C6' Ru Cl2 116.07(8)
C4' Ru Cl2 89.32(7)
C7' Ru Cl2 153.88(8)
S Ru Cl2 90.13(2)
C5' Ru Cl1 114.65(8)
C9' Ru Cl1 155.46(8)
C8' Ru Cl1 117.14(9)
C6' Ru Cl1 88.66(8)
C4' Ru Cl1 152.91(7)
C7' Ru Cl1 89.45(8)
S Ru Cl1 92.51(2)
Cl2 Ru Cl1 87.47(3)
C6 S Ru 116.75(9)
C8 O2 C11 106.0(3)
C5 O3 C2 105.6(3)
C6 N1 C1 127.3(2)
C6 N1 H1 116.3
C1 N1 H1 116.4
C6 N2 C7 124.6(3)
C6 N2 H2 117.7
C7 N2 H2 117.7
O1 C1 N1 122.8(3)
O1 C1 C2 123.3(3)
N1 C1 C2 113.8(2)
C4' C1' C2' 113.1(3)
C4' C1' C3' 108.7(3)
C2' C1' C3' 112.1(3)
C4' C1' H1' 107.5
C2' C1' H1' 107.5
C3' C1' H1' 107.5
C3 C2 O3 110.4(3)
C3 C2 C1 133.5(3)
O3 C2 C1 116.1(3)
C1' C2' H2'1 109.5
C1' C2' H2'2 109.5
H2'1 C2' H2'2 109.5
C1' C2' H2'3 109.5
H2'1 C2' H2'3 109.5
H2'2 C2' H2'3 109.5
C2 C3 C4 106.8(3)
C2 C3 H3 126.6
C4 C3 H3 126.6
C1' C3' H3'1 109.5
C1' C3' H3'2 109.5
H3'1 C3' H3'2 109.5
C1' C3' H3'3 109.5
H3'1 C3' H3'3 109.5
H3'2 C3' H3'3 109.5
C5 C4 C3 106.1(3)
C5 C4 H4 127.0
C3 C4 H4 127.0
C9' C4' C5' 117.2(3)
C9' C4' C1' 123.6(3)
C5' C4' C1' 119.1(3)
C9' C4' Ru 70.45(15)
C5' C4' Ru 69.87(14)
C1' C4' Ru 129.02(19)
C4 C5 O3 111.2(3)
C4 C5 H5 124.4
O3 C5 H5 124.4
C6' C5' C4' 121.5(3)
C6' C5' Ru 71.81(15)
C4' C5' Ru 71.74(14)
C6' C5' H5' 119.3
C4' C5' H5' 119.3
Ru C5' H5' 129.8
C5' C6' C7' 121.1(3)
C5' C6' Ru 70.73(15)
C7' C6' Ru 72.16(15)
C5' C6' H6' 119.5
C7' C6' H6' 119.5
Ru C6' H6' 130.3
N2 C6 N1 117.2(2)
N2 C6 S 121.2(2)
N1 C6 S 121.61(19)
C8' C7' C6' 117.9(3)
C8' C7' C10' 121.1(3)
C6' C7' C10' 121.0(3)
C8' C7' Ru 70.28(16)
C6' C7' Ru 69.95(15)
C10' C7' Ru 129.0(2)
N2 C7 C8 109.8(3)
N2 C7 H7A 109.7
C8 C7 H7A 109.7
N2 C7 H7B 109.7
C8 C7 H7B 109.7
H7A C7 H7B 108.2
C7' C8' C9' 121.2(3)
C7' C8' Ru 72.57(16)
C9' C8' Ru 70.54(15)
C7' C8' H8' 119.4
C9' C8' H8' 119.4
Ru C8' H8' 130.1
C9 C8 O2 109.8(3)
C9 C8 C7 134.5(4)
O2 C8 C7 115.6(3)
C4' C9' C8' 121.2(3)
C4' C9' Ru 71.94(15)
C8' C9' Ru 71.14(15)
C4' C9' H9' 119.4
C8' C9' H9' 119.4
Ru C9' H9' 130.1
C8 C9 C10 106.6(3)
C8 C9 H9 126.7
C10 C9 H9 126.7
C7' C10' H10A 109.5
C7' C10' H10B 109.5
H10A C10' H10B 109.5
C7' C10' H10C 109.5
H10A C10' H10C 109.5
H10B C10' H10C 109.5
C11 C10 C9 106.7(3)
C11 C10 H10 126.7
C9 C10 H10 126.7
C10 C11 O2 110.8(3)
C10 C11 H11 124.6
O2 C11 H11 124.6
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
Ru C5' 2.168(2)
Ru C9' 2.174(3)
Ru C8' 2.182(3)
Ru C6' 2.182(3)
Ru C4' 2.193(2)
Ru C7' 2.211(3)
Ru S 2.4163(6)
Ru Cl2 2.4290(7)
Ru Cl1 2.4311(7)
S C6 1.702(3)
O1 C1 1.215(4)
O2 C8 1.357(4)
O2 C11 1.368(4)
O3 C5 1.357(5)
O3 C2 1.364(3)
N1 C6 1.361(4)
N1 C1 1.381(4)
N1 H1 0.8598
N2 C6 1.317(3)
N2 C7 1.452(4)
N2 H2 0.8604
C1 C2 1.446(4)
C1' C4' 1.512(4)
C1' C2' 1.516(5)
C1' C3' 1.525(5)
C1' H1' 0.9800
C2 C3 1.333(5)
C2' H2'1 0.9600
C2' H2'2 0.9600
C2' H2'3 0.9600
C3 C4 1.414(5)
C3 H3 0.9300
C3' H3'1 0.9600
C3' H3'2 0.9600
C3' H3'3 0.9600
C4 C5 1.330(6)
C4 H4 0.9300
C4' C9' 1.408(4)
C4' C5' 1.434(4)
C5 H5 0.9300
C5' C6' 1.397(4)
C5' H5' 0.9300
C6' C7' 1.427(4)
C6' H6' 0.9300
C7' C8' 1.400(4)
C7' C10' 1.500(4)
C7 C8 1.486(4)
C7 H7A 0.9700
C7 H7B 0.9700
C8' C9' 1.430(4)
C8' H8' 0.9300
C8 C9 1.331(5)
C9' H9' 0.9300
C9 C10 1.421(5)
C9 H9 0.9300
C10' H10A 0.9600
C10' H10B 0.9600
C10' H10C 0.9600
C10 C11 1.305(6)
C10 H10 0.9300
C11 H11 0.9300
loop_
_geom_torsion_atom_site_label_1
_geom_torsion_atom_site_label_2
_geom_torsion_atom_site_label_3
_geom_torsion_atom_site_label_4
_geom_torsion
C6 N1 C1 O1 3.7(6)
C6 N1 C1 C2 -176.5(3)
C5 O3 C2 C3 -1.3(4)
C5 O3 C2 C1 178.9(3)
O1 C1 C2 C3 -175.8(4)
N1 C1 C2 C3 4.4(6)
O1 C1 C2 O3 4.0(5)
N1 C1 C2 O3 -175.8(3)
O3 C2 C3 C4 1.0(5)
C1 C2 C3 C4 -179.2(4)
C2 C3 C4 C5 -0.3(5)
C2' C1' C4' C9' 18.4(4)
C3' C1' C4' C9' -106.8(4)
C2' C1' C4' C5' -159.7(3)
C3' C1' C4' C5' 75.1(4)
C2' C1' C4' Ru -72.9(4)
C3' C1' C4' Ru 161.9(3)
C3 C4 C5 O3 -0.6(6)
C2 O3 C5 C4 1.1(5)
C9' C4' C5' C6' 0.1(4)
C1' C4' C5' C6' 178.3(2)
Ru C4' C5' C6' 54.0(2)
C9' C4' C5' Ru -53.9(2)
C1' C4' C5' Ru 124.3(2)
C4' C5' C6' C7' -0.1(4)
Ru C5' C6' C7' 53.9(2)
C4' C5' C6' Ru -54.0(2)
C7 N2 C6 N1 179.3(3)
C7 N2 C6 S 0.1(5)
C1 N1 C6 N2 -1.8(5)
C1 N1 C6 S 177.4(3)
Ru S C6 N2 179.4(2)
Ru S C6 N1 0.2(3)
C5' C6' C7' C8' -0.1(4)
Ru C6' C7' C8' 53.1(2)
C5' C6' C7' C10' -177.4(3)
Ru C6' C7' C10' -124.2(3)
C5' C6' C7' Ru -53.2(2)
C6 N2 C7 C8 -160.1(3)
C6' C7' C8' C9' 0.3(4)
C10' C7' C8' C9' 177.6(3)
Ru C7' C8' C9' 53.3(2)
C6' C7' C8' Ru -53.0(2)
C10' C7' C8' Ru 124.4(3)
C11 O2 C8 C9 0.9(4)
C11 O2 C8 C7 178.5(4)
N2 C7 C8 C9 119.4(5)
N2 C7 C8 O2 -57.5(5)
C5' C4' C9' C8' 0.1(4)
C1' C4' C9' C8' -178.0(2)
Ru C4' C9' C8' -53.5(2)
C5' C4' C9' Ru 53.6(2)
C1' C4' C9' Ru -124.5(3)
C7' C8' C9' C4' -0.3(4)
Ru C8' C9' C4' 53.9(2)
C7' C8' C9' Ru -54.2(2)
O2 C8 C9 C10 -1.1(4)
C7 C8 C9 C10 -178.1(4)
C8 C9 C10 C11 0.8(5)
C9 C10 C11 O2 -0.3(5)
C8 O2 C11 C10 -0.3(5)
