#------------------------------------------------------------------------------
#$Date: 2019-11-07 21:58:40 +0200 (Thu, 07 Nov 2019) $
#$Revision: 223668 $
#$URL: file:///home/coder/svn-repositories/cod/cif/7/23/27/7232734.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_7232734
loop_
_publ_author_name
'Giordano, Nico'
'Beavers, Christine M.'
'Kamenev, Konstantin V.'
'Marshall, William G.'
'Moggach, Stephen A.'
'Patterson, Simon D.'
'Teat, Simon J.'
'Warren, John E.'
'Wood, Peter A.'
'Parsons, Simon'
_publ_section_title
;
 High-pressure polymorphism in l-threonine between ambient pressure and 22
 GPa
;
_journal_issue                   30
_journal_name_full               CrystEngComm
_journal_page_first              4444
_journal_paper_doi               10.1039/C9CE00388F
_journal_volume                  21
_journal_year                    2019
_chemical_formula_sum            'C4 H9 N O3'
_chemical_formula_weight         119.12
_space_group_crystal_system      orthorhombic
_space_group_IT_number           19
_space_group_name_Hall           'P 2ac 2ab'
_space_group_name_H-M_alt        'P 21 21 21'
_symmetry_space_group_name_Hall  'P 2ac 2ab'
_symmetry_space_group_name_H-M   'P 21 21 21'
_atom_sites_solution_hydrogens   geom
_audit_creation_method           SHELXL-2014/7
_audit_update_record
;
2019-03-15 deposited with the CCDC.    2019-05-09 downloaded from the CCDC.
;
_cell_angle_alpha                90
_cell_angle_beta                 90
_cell_angle_gamma                90
_cell_formula_units_Z            4
_cell_length_a                   5.0055(2)
_cell_length_b                   13.4104(9)
_cell_length_c                   7.1162(4)
_cell_measurement_reflns_used    1360
_cell_measurement_temperature    296(2)
_cell_measurement_theta_max      17.389
_cell_measurement_theta_min      2.807
_cell_volume                     477.68(5)
_computing_cell_refinement       'SAINT v7.68A (Bruker, 2009)'
_computing_data_reduction        'SAINT v7.68A (Bruker, 2009)'
_computing_structure_refinement  'SHELXL-2014/7 (Sheldrick, 2014)'
_computing_structure_solution    'SHELXT-2014/7 (Sheldrick, 2014)'
_diffrn_ambient_pressure         3.23
_diffrn_ambient_temperature      296(2)
_diffrn_measured_fraction_theta_full 0.721
_diffrn_measured_fraction_theta_max 0.730
_diffrn_measurement_device_type  'Bruker-Nonius APEX II'
_diffrn_measurement_method       'φ and ω scans'
_diffrn_radiation_type           synchrotron
_diffrn_radiation_wavelength     0.478
_diffrn_reflns_av_R_equivalents  0.0412
_diffrn_reflns_av_unetI/netI     0.0400
_diffrn_reflns_Laue_measured_fraction_full 0.721
_diffrn_reflns_Laue_measured_fraction_max 0.730
_diffrn_reflns_limit_h_max       6
_diffrn_reflns_limit_h_min       -6
_diffrn_reflns_limit_k_max       14
_diffrn_reflns_limit_k_min       -13
_diffrn_reflns_limit_l_max       8
_diffrn_reflns_limit_l_min       -8
_diffrn_reflns_number            2848
_diffrn_reflns_point_group_measured_fraction_full 0.756
_diffrn_reflns_point_group_measured_fraction_max 0.758
_diffrn_reflns_theta_full        16.666
_diffrn_reflns_theta_max         17.389
_diffrn_reflns_theta_min         2.807
_exptl_absorpt_coefficient_mu    0.065
_exptl_absorpt_correction_T_max  0.7441
_exptl_absorpt_correction_T_min  0.6292
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details
'SADABS-2008/1 (Bruker,2008) was used for absorption correction. wR2(int) was 0.0775 before and 0.0550 after correction. The Ratio of minimum to maximum transmission is 0.8456. The λ/2 correction factor is 0.0000.'
_exptl_crystal_colour            colourless
_exptl_crystal_density_diffrn    1.656
_exptl_crystal_description       blade
_exptl_crystal_F_000             256
_exptl_crystal_size_max          0.100
_exptl_crystal_size_mid          0.100
_exptl_crystal_size_min          0.100
_refine_diff_density_max         0.418
_refine_diff_density_min         -0.309
_refine_diff_density_rms         0.071
_refine_ls_abs_structure_details
;
 Flack x determined using 262 quotients [(I+)-(I-)]/[(I+)+(I-)]
 (Parsons, Flack and Wagner, Acta Cryst. B69 (2013) 249-259).
;
_refine_ls_abs_structure_Flack   -0.4(10)
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.052
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     33
_refine_ls_number_reflns         738
_refine_ls_number_restraints     17
_refine_ls_restrained_S_all      1.041
_refine_ls_R_factor_all          0.0671
_refine_ls_R_factor_gt           0.0615
_refine_ls_shift/su_max          0.000
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0594P)²+1.0174P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1476
_refine_ls_wR_factor_ref         0.1517
_reflns_Friedel_coverage         0.689
_reflns_Friedel_fraction_full    0.813
_reflns_Friedel_fraction_max     0.805
_reflns_number_gt                684
_reflns_number_total             738
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            c9ce00388f5.cif
_cod_data_source_block           3_23GPa
_cod_depositor_comments
'Adding full bibliography for 7232730--7232750.cif.'
_cod_database_code               7232734
_shelx_shelxl_version_number     2014/7
_shelx_space_group_comment
;
The symmetry employed for this shelxl refinement is uniquely defined
by the following loop, which should always be used as a source of
symmetry information in preference to the above space-group names.
They are only intended as comments.
;
_shelx_estimated_absorpt_t_min   0.993
_shelx_estimated_absorpt_t_max   0.993
_shelx_res_file
;

    sample3_a.res created by SHELXL-2014/7


TITL sample3_a.res in P2(1)2(1)2(1)
REM Old TITL sample3 in P2(1)2(1)2(1)

REM SHELXT solution in P2(1)2(1)2(1)
REM R1 0.103,  Rweak 0.027,  Alpha 0.003,  Orientation as input
REM Flack x = -0.335 ( 0.896 ) from Parsons' quotients
REM Formula found by SHELXT:  C4 N O3

CELL  0.4780   5.0055  13.4104   7.1162   90.000   90.000   90.000
ZERR    4.000   0.0002   0.0009   0.0004    0.000    0.000    0.000
LATT -1
SYMM 1/2-X, -Y, 1/2+Z
SYMM -X, 1/2+Y, 1/2-Z
SYMM 1/2+X, 1/2-Y, -Z
SFAC C H N O
DISP $C  0.00066  0.00068  6.00319!source kissel
DISP $H -0.00003  0.00000  0.65141!source kissel
DISP $N  0.00177  0.00140  8.86248!source kissel
DISP $O  0.00365  0.00257 13.13813!source kissel
UNIT 16 36 4 12
TEMP 23.000
L.S. 10
BOND $H
LIST 6
FMAP 2
PLAN 20
OMIT -1 2 1
OMIT 2 2 7
OMIT 3 1 0
OMIT 3 0 2
OMIT 3 6 0
OMIT 2 2 0
DFIX 1.241 C1 O1
DFIX 1.249 C1 O2
DFIX 1.536 C1 C2
DFIX 1.489 C2 N1
DFIX 1.53 C2 C3
DFIX 1.424 C3 O3
DFIX 1.513 C3 C4
DFIX 2.229 0.04 O1 O2
DFIX 2.368 0.04 O1 C2
DFIX 2.37 0.04 O2 C2
DFIX 2.477 0.04 C1 N1
DFIX 2.553 0.04 C1 C3
DFIX 2.453 0.04 N1 C3
DFIX 2.332 0.04 C2 O3
DFIX 2.543 0.04 C2 C4
DFIX 2.332 0.04 O3 C2
DFIX 2.421 0.04 O3 C4
SIZE 0.1 0.1 0.1
RIGU
FMAP 2
ACTA
WGHT    0.059400    1.017400
FVAR       3.63949
C1    1    0.312999    0.502885    0.655487    11.00000    0.01313
O1    4    0.494093    0.564867    0.688625    11.00000    0.02329
O2    4    0.068388    0.517628    0.672407    11.00000    0.02339
C2    1    0.402566    0.400651    0.588739    11.00000    0.01320
AFIX  13
H4    2    0.271774    0.375586    0.497798    11.00000   -1.20000
AFIX   0
N1    3    0.666033    0.408854    0.494038    11.00000    0.01644
AFIX  33
H3    2    0.654844    0.452531    0.400203    11.00000   -1.50000
H1    2    0.788004    0.429408    0.576384    11.00000   -1.50000
H2    2    0.713145    0.349538    0.448774    11.00000   -1.50000
AFIX   0
C3    1    0.426565    0.325323    0.749209    11.00000    0.01611
AFIX  13
H5    2    0.541806    0.352416    0.848141    11.00000   -1.20000
AFIX   0
O3    4    0.551351    0.241743    0.665018    11.00000    0.02145
AFIX  83
H6    2    0.557144    0.195712    0.740760    11.00000   -1.50000
AFIX   0
C4    1    0.158631    0.297702    0.830871    11.00000    0.02409
AFIX  33
H8    2    0.078494    0.355538    0.886929    11.00000   -1.50000
H9    2    0.044734    0.272922    0.732891    11.00000   -1.50000
H7    2    0.182079    0.247061    0.924783    11.00000   -1.50000
AFIX   0
HKLF 4

REM  sample3_a.res in P2(1)2(1)2(1)
REM R1 =  0.0615 for     684 Fo > 4sig(Fo)  and  0.0671 for all     738 data
REM     33 parameters refined using     17 restraints

END

WGHT      0.0600      1.0135

REM Highest difference peak  0.418,  deepest hole -0.309,  1-sigma level  0.071
Q1    1   0.0712  0.4979  0.7461  11.00000  0.05    0.42
Q2    1   0.4929  0.5388  0.7637  11.00000  0.05    0.40
Q3    1   0.0754  0.5380  0.6144  11.00000  0.05    0.40
Q4    1   0.5301  0.5749  0.6105  11.00000  0.05    0.30
Q5    1   0.6256  0.2583  0.7034  11.00000  0.05    0.30
Q6    1   0.4933  0.2194  0.6202  11.00000  0.05    0.27
Q7    1   0.7498  0.4971  0.5650  11.00000  0.05    0.25
Q8    1   0.0748  0.2950  0.7864  11.00000  0.05    0.24
Q9    1   0.1997  0.3239  0.8870  11.00000  0.05    0.24
Q10   1  -0.0753  0.5544  0.4950  11.00000  0.05    0.22
Q11   1   0.5015  0.6160  0.8239  11.00000  0.05    0.20
Q12   1   0.6212  0.4198  0.4175  11.00000  0.05    0.20
Q13   1   0.8800  0.3981  0.6817  11.00000  0.05    0.20
Q14   1   0.4167  0.3691  0.6492  11.00000  0.05    0.20
Q15   1   0.9554  0.3844  0.5389  11.00000  0.05    0.19
Q16   1   0.3996  0.4654  0.5303  11.00000  0.05    0.19
Q17   1  -0.0316  0.3771  1.0391  11.00000  0.05    0.19
Q18   1   0.7400  0.4330  0.7998  11.00000  0.05    0.18
Q19   1   0.4625  0.1949  0.9273  11.00000  0.05    0.18
Q20   1   0.2968  0.3463  0.4863  11.00000  0.05    0.18
;
_shelx_res_checksum              4435
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x+1/2, -y, z+1/2'
'-x, y+1/2, -z+1/2'
'x+1/2, -y+1/2, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
_atom_site_refinement_flags_adp
C1 C 0.3130(8) 0.5029(4) 0.6555(6) 0.0131(9) Uiso 1 1 d D .
O1 O 0.4941(6) 0.5649(3) 0.6886(5) 0.0233(9) Uiso 1 1 d D .
O2 O 0.0684(7) 0.5176(3) 0.6724(5) 0.0234(9) Uiso 1 1 d D .
C2 C 0.4026(8) 0.4007(4) 0.5887(6) 0.0132(10) Uiso 1 1 d D .
H4 H 0.2718 0.3756 0.4978 0.016 Uiso 1 1 calc R U
N1 N 0.6660(7) 0.4089(3) 0.4940(5) 0.0164(9) Uiso 1 1 d D .
H3 H 0.6548 0.4525 0.4002 0.025 Uiso 1 1 calc R U
H1 H 0.7880 0.4294 0.5764 0.025 Uiso 1 1 calc R U
H2 H 0.7131 0.3495 0.4488 0.025 Uiso 1 1 calc R U
C3 C 0.4266(9) 0.3253(4) 0.7492(6) 0.0161(10) Uiso 1 1 d D .
H5 H 0.5418 0.3524 0.8481 0.019 Uiso 1 1 calc R U
O3 O 0.5514(6) 0.2417(3) 0.6650(5) 0.0215(9) Uiso 1 1 d D .
H6 H 0.5571 0.1957 0.7408 0.032 Uiso 1 1 calc R U
C4 C 0.1586(10) 0.2977(4) 0.8309(8) 0.0241(11) Uiso 1 1 d D .
H8 H 0.0785 0.3555 0.8869 0.036 Uiso 1 1 calc R U
H9 H 0.0447 0.2729 0.7329 0.036 Uiso 1 1 calc R U
H7 H 0.1821 0.2471 0.9248 0.036 Uiso 1 1 calc R U
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0007 0.0007 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0018 0.0014 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0036 0.0026 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
O2 C1 O1 126.0(5)
O2 C1 C2 117.6(4)
O1 C1 C2 116.4(4)
N1 C2 C3 108.5(3)
N1 C2 C1 109.7(4)
C3 C2 C1 112.7(4)
N1 C2 H4 108.6
C3 C2 H4 108.6
C1 C2 H4 108.6
C2 N1 H3 109.5
C2 N1 H1 109.5
H3 N1 H1 109.5
C2 N1 H2 109.5
H3 N1 H2 109.5
H1 N1 H2 109.5
O3 C3 C4 111.2(4)
O3 C3 C2 104.0(4)
C4 C3 C2 112.3(4)
O3 C3 H5 109.7
C4 C3 H5 109.7
C2 C3 H5 109.7
C3 O3 H6 109.5
C3 C4 H8 109.5
C3 C4 H9 109.5
H8 C4 H9 109.5
C3 C4 H7 109.5
H8 C4 H7 109.5
H9 C4 H7 109.5
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
C1 O2 1.246(5)
C1 O1 1.252(6)
C1 C2 1.519(6)
C2 N1 1.485(6)
C2 C3 1.529(6)
C2 H4 0.9800
N1 H3 0.8900
N1 H1 0.8900
N1 H2 0.8900
C3 O3 1.416(6)
C3 C4 1.508(6)
C3 H5 0.9800
O3 H6 0.8200
C4 H8 0.9600
C4 H9 0.9600
C4 H7 0.9600
