#------------------------------------------------------------------------------ #$Date: 2010-09-25 14:02:18 +0300 (Sat, 25 Sep 2010) $ #$Revision: 1523 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/1100772.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1100772 loop_ _publ_author_name 'Deng-Ke Cao' 'Yi-Zhi Li' 'You Song' 'Li-Min Zheng' _publ_section_title ; Three-, Two-, and One-Dimensional Metal Phosphonates Based on [Hydroxy(4-pyridyl)methyl]phosphonate: M{(4-C5H4N)CH(OH)PO3}(H2O) (M = Ni, Cd) and Gd{(4-C5H4N)CH(OH)P(OH)O2}3.6H2O ; _journal_name_full 'Inorganic Chemistry' _journal_page_first 3599 _journal_page_last 3604 _journal_volume 44 _journal_year 2005 _chemical_formula_moiety 'C18 H21 Gd N3 O12 P3, 6(H2 O)' _chemical_formula_sum 'C18 H33 Gd N3 O18 P3' _chemical_formula_weight 829.63 _chemical_name_systematic ; ? ; _space_group_IT_number 148 _symmetry_cell_setting Rhombohedral _symmetry_space_group_name_Hall '-R 3' _symmetry_space_group_name_H-M 'R -3 :H' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_formula_units_Z 6 _cell_length_a 22.2714(16) _cell_length_b 22.2714(16) _cell_length_c 9.8838(11) _cell_measurement_reflns_used 647 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 18.078 _cell_measurement_theta_min 3.166 _cell_volume 4245.7(6) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction 'SAINT (Bruker, 2000)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Bruker, 2000)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker Smart Aepex CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0225 _diffrn_reflns_av_sigmaI/netI 0.0410 _diffrn_reflns_limit_h_max 27 _diffrn_reflns_limit_h_min -27 _diffrn_reflns_limit_k_max 27 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 7268 _diffrn_reflns_theta_full 25.99 _diffrn_reflns_theta_max 25.99 _diffrn_reflns_theta_min 1.83 _exptl_absorpt_coefficient_mu 2.600 _exptl_absorpt_correction_T_max 0.56 _exptl_absorpt_correction_T_min 0.46 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS(Bruker, 2000)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.947 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 2490 _exptl_crystal_size_max 0.1 _exptl_crystal_size_mid 0.04 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.927 _refine_diff_density_min -0.756 _refine_diff_density_rms 0.189 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.995 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 131 _refine_ls_number_reflns 1856 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.995 _refine_ls_R_factor_all 0.0627 _refine_ls_R_factor_gt 0.0516 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1200P)^2^+1.9900P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1502 _refine_ls_wR_factor_ref 0.1532 _reflns_number_gt 1419 _reflns_number_total 1856 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ic0484248si20050317_103348_3.cif _[local]_cod_data_source_block Gd{(4-C5H4N)CH(OH)P(OH)O2}3.6H2O _[local]_cod_cif_authors_sg_H-M 'R -3' _cod_database_code 1100772 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' 'x+2/3, y+1/3, z+1/3' '-y+2/3, x-y+1/3, z+1/3' '-x+y+2/3, -x+1/3, z+1/3' 'x+1/3, y+2/3, z+2/3' '-y+1/3, x-y+2/3, z+2/3' '-x+y+1/3, -x+2/3, z+2/3' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' '-x+2/3, -y+1/3, -z+1/3' 'y+2/3, -x+y+1/3, -z+1/3' 'x-y+2/3, x+1/3, -z+1/3' '-x+1/3, -y+2/3, -z+2/3' 'y+1/3, -x+y+2/3, -z+2/3' 'x-y+1/3, x+2/3, -z+2/3' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Gd1 Gd 0.0000 0.0000 0.0000 0.0224(3) Uani 1 6 d S . . Gd2 Gd 0.0000 0.0000 0.5000 0.0220(3) Uani 1 6 d S . . P1 P -0.02670(9) 0.10377(9) 0.25873(17) 0.0269(4) Uani 1 1 d . . . C1 C 0.1141(4) 0.3598(4) 0.2008(8) 0.0379(16) Uani 1 1 d . . . H1B H 0.1174 0.4009 0.2313 0.045 Uiso 1 1 calc R . . C2 C 0.0839(4) 0.2989(4) 0.2844(7) 0.0365(16) Uani 1 1 d . . . H2A H 0.0669 0.2998 0.3699 0.044 Uiso 1 1 calc R . . C3 C 0.0804(4) 0.2393(3) 0.2367(7) 0.0355(17) Uani 1 1 d . . . C4 C 0.1082(3) 0.2422(4) 0.1072(7) 0.0323(15) Uani 1 1 d . . . H4D H 0.1112 0.2049 0.0730 0.039 Uiso 1 1 calc R . . C5 C 0.1306(4) 0.3020(4) 0.0327(7) 0.0326(15) Uani 1 1 d . . . H5A H 0.1411 0.3007 -0.0580 0.039 Uiso 1 1 calc R . . C6 C 0.0518(4) 0.1755(3) 0.3254(7) 0.0327(15) Uani 1 1 d . . . H6A H 0.0868 0.1612 0.3323 0.039 Uiso 1 1 calc R . . N1 N 0.1378(3) 0.3561(3) 0.0763(6) 0.0385(15) Uani 1 1 d . . . O1 O -0.0500(2) 0.0496(3) 0.3733(4) 0.0300(10) Uani 1 1 d . . . O2 O -0.0091(2) 0.0798(2) 0.1283(4) 0.0244(9) Uani 1 1 d . . . O3 O -0.0781(3) 0.1289(2) 0.2415(4) 0.0314(10) Uani 1 1 d . . . H3B H -0.0852 0.1418 0.3177 0.038 Uiso 1 1 d R . . O4 O 0.0407(3) 0.1944(3) 0.4568(5) 0.0372(12) Uani 1 1 d . . . H4A H 0.0783 0.2280 0.4869 0.045 Uiso 1 1 d R . . O1W O 0.8886(2) 0.3104(3) 0.1050(4) 0.0317(10) Uani 1 1 d . . . H5E H 0.8517 0.2893 0.0582 0.038 Uiso 1 1 d R . . H5C H 0.8745 0.3201 0.1773 0.038 Uiso 1 1 d R . . O2W O 0.9751(3) 0.2566(3) 0.0360(5) 0.0372(12) Uani 1 1 d . . . H6E H 0.9496 0.2731 0.0593 0.045 Uiso 1 1 d R . . H6B H 1.0156 0.2816 0.0685 0.045 Uiso 1 1 d R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Gd1 0.0207(3) 0.0207(3) 0.0260(4) 0.000 0.000 0.01034(15) Gd2 0.0238(3) 0.0238(3) 0.0185(4) 0.000 0.000 0.01188(15) P1 0.0336(9) 0.0297(9) 0.0144(7) 0.0006(6) -0.0006(7) 0.0135(7) C1 0.043(4) 0.025(3) 0.042(4) 0.008(3) 0.011(3) 0.014(3) C2 0.041(4) 0.043(4) 0.028(4) -0.002(3) 0.002(3) 0.023(3) C3 0.050(4) 0.008(3) 0.037(4) -0.005(3) -0.005(3) 0.005(3) C4 0.027(3) 0.031(3) 0.029(4) -0.003(3) -0.004(3) 0.007(3) C5 0.036(4) 0.050(4) 0.022(3) 0.000(3) -0.003(3) 0.029(3) C6 0.032(4) 0.024(3) 0.032(4) -0.004(3) 0.001(3) 0.007(3) N1 0.036(3) 0.021(3) 0.032(3) 0.012(2) 0.005(3) -0.006(2) O1 0.030(2) 0.048(3) 0.014(2) -0.0050(19) -0.0107(17) 0.021(2) O2 0.0138(19) 0.022(2) 0.029(2) -0.0019(18) -0.0005(16) 0.0029(17) O3 0.048(3) 0.043(3) 0.014(2) 0.0072(19) 0.005(2) 0.031(2) O4 0.038(3) 0.032(3) 0.029(3) 0.003(2) -0.001(2) 0.008(2) O1W 0.033(2) 0.044(3) 0.019(2) -0.006(2) -0.0065(19) 0.021(2) O2W 0.038(3) 0.055(3) 0.025(3) -0.001(2) -0.003(2) 0.029(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Gd Gd -0.1653 3.9035 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O2 Gd1 O2 88.08(15) 10 3 ? O2 Gd1 O2 91.92(15) 10 12 ? O2 Gd1 O2 180.0(3) 3 12 ? O2 Gd1 O2 180.0(2) 10 . ? O2 Gd1 O2 91.92(15) 3 . ? O2 Gd1 O2 88.08(15) 12 . ? O2 Gd1 O2 91.92(15) 10 11 ? O2 Gd1 O2 88.08(15) 3 11 ? O2 Gd1 O2 91.92(15) 12 11 ? O2 Gd1 O2 88.08(15) . 11 ? O2 Gd1 O2 88.08(15) 10 2 ? O2 Gd1 O2 91.92(15) 3 2 ? O2 Gd1 O2 88.08(15) 12 2 ? O2 Gd1 O2 91.92(15) . 2 ? O2 Gd1 O2 180.0(4) 11 2 ? O1 Gd2 O1 180.00(19) 11_556 2 ? O1 Gd2 O1 86.98(15) 11_556 3 ? O1 Gd2 O1 93.02(15) 2 3 ? O1 Gd2 O1 93.02(15) 11_556 12_556 ? O1 Gd2 O1 86.98(15) 2 12_556 ? O1 Gd2 O1 180.00(19) 3 12_556 ? O1 Gd2 O1 93.02(15) 11_556 10_556 ? O1 Gd2 O1 86.98(15) 2 10_556 ? O1 Gd2 O1 86.98(15) 3 10_556 ? O1 Gd2 O1 93.02(15) 12_556 10_556 ? O1 Gd2 O1 86.98(15) 11_556 . ? O1 Gd2 O1 93.02(15) 2 . ? O1 Gd2 O1 93.02(15) 3 . ? O1 Gd2 O1 86.98(15) 12_556 . ? O1 Gd2 O1 180.00(17) 10_556 . ? O3 P1 O2 114.2(3) . . ? O3 P1 O1 110.5(3) . . ? O2 P1 O1 113.1(3) . . ? O3 P1 C6 107.0(3) . . ? O2 P1 C6 108.3(3) . . ? O1 P1 C6 102.8(3) . . ? N1 C1 C2 118.4(6) . . ? N1 C1 H1B 120.8 . . ? C2 C1 H1B 120.8 . . ? C3 C2 C1 119.3(7) . . ? C3 C2 H2A 120.4 . . ? C1 C2 H2A 120.4 . . ? C2 C3 C4 117.1(6) . . ? C2 C3 C6 120.2(7) . . ? C4 C3 C6 122.6(6) . . ? C5 C4 C3 117.9(7) . . ? C5 C4 H4D 121.0 . . ? C3 C4 H4D 121.0 . . ? N1 C5 C4 125.1(7) . . ? N1 C5 H5A 117.5 . . ? C4 C5 H5A 117.5 . . ? O4 C6 C3 107.7(5) . . ? O4 C6 P1 111.1(5) . . ? C3 C6 P1 112.8(5) . . ? O4 C6 H6A 108.4 . . ? C3 C6 H6A 108.4 . . ? P1 C6 H6A 108.4 . . ? C5 N1 C1 121.4(6) . . ? P1 O1 Gd2 136.3(3) . . ? P1 O2 Gd1 152.5(3) . . ? P1 O3 H3B 109.2 . . ? C6 O4 H4A 109.8 . . ? H5E O1W H5C 102.7 . . ? H6E O2W H6B 109.5 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Gd1 O2 2.273(4) 10 ? Gd1 O2 2.273(4) 3 ? Gd1 O2 2.273(4) 12 ? Gd1 O2 2.273(4) . ? Gd1 O2 2.273(4) 11 ? Gd1 O2 2.273(4) 2 ? Gd2 O1 2.293(4) 11_556 ? Gd2 O1 2.293(4) 2 ? Gd2 O1 2.293(4) 3 ? Gd2 O1 2.293(4) 12_556 ? Gd2 O1 2.293(4) 10_556 ? Gd2 O1 2.293(4) . ? P1 O3 1.513(5) . ? P1 O2 1.520(5) . ? P1 O1 1.543(5) . ? P1 C6 1.803(7) . ? C1 N1 1.358(10) . ? C1 C2 1.436(10) . ? C1 H1B 0.9300 . ? C2 C3 1.374(10) . ? C2 H2A 0.9300 . ? C3 C4 1.409(10) . ? C3 C6 1.513(9) . ? C4 C5 1.378(10) . ? C4 H4D 0.9300 . ? C5 N1 1.212(9) . ? C5 H5A 0.9300 . ? C6 O4 1.425(8) . ? C6 H6A 0.9800 . ? O3 H3B 0.8498 . ? O4 H4A 0.8498 . ? O1W H5E 0.8500 . ? O1W H5C 0.8503 . ? O2W H6E 0.8501 . ? O2W H6B 0.8498 . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O3 H3B N1 0.85 1.87 2.621(7) 146.6 6_455 O4 H4A N1 0.85 2.54 3.376(8) 169.2 16 O1W H5E O3 0.85 2.20 2.878(7) 136.2 13 O1W H5C O2W 0.85 2.37 2.882(6) 119.1 6_665 O2W H6E O1W 0.85 1.97 2.816(7) 177.4 . O2W H6B N1 0.85 2.38 3.189(8) 159.7 1_655