#------------------------------------------------------------------------------ #$Date: 2017-02-22 04:06:25 +0200 (Wed, 22 Feb 2017) $ #$Revision: 192427 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/54/53/1545303.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1545303 loop_ _publ_author_name 'Tao, Cheng' 'Zhang, Jing' 'Chen, Xiaoming' 'Wang, Huifei' 'Li, Yun' 'Cheng, Bin' 'Zhai, Hongbin' _publ_section_title ; Formal Synthesis of (+-)-Aplykurodinone-1 through a Hetero-Pauson--Khand Cycloaddition Approach ; _journal_name_full 'Organic Letters' _journal_paper_doi 10.1021/acs.orglett.7b00068 _journal_year 2017 _chemical_formula_moiety 'C12 H16 O3' _chemical_formula_sum 'C12 H16 O3' _chemical_formula_weight 208.25 _chemical_name_common 'C12 H16 O3' _chemical_name_systematic ; 'C12 H16 O3' ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 109.476(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.170(6) _cell_length_b 11.066(6) _cell_length_c 8.455(4) _cell_measurement_reflns_used 1188 _cell_measurement_temperature 566(2) _cell_measurement_theta_max 67.5 _cell_measurement_theta_min 22.8 _cell_volume 1073.5(9) _computing_cell_refinement 'CrystalClear-SM Expert 2.0 r4 (Rigaku, 2009)' _computing_data_collection 'CrystalClear-SM Expert 2.0 r4 (Rigaku, 2009)' _computing_data_reduction 'CrystalClear-SM Expert 2.0 r4 (Rigaku, 2009)' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 566(2) _diffrn_detector_area_resol_mean 22.2222 _diffrn_measured_fraction_theta_full 0.973 _diffrn_measured_fraction_theta_max 0.973 _diffrn_measurement_device_type 'Rigaku Saturn944+ (2x2 bin mode)' _diffrn_measurement_method 'profile data from \w-scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0659 _diffrn_reflns_av_sigmaI/netI 0.0483 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 6354 _diffrn_reflns_theta_full 25.28 _diffrn_reflns_theta_max 25.28 _diffrn_reflns_theta_min 1.77 _exptl_absorpt_coefficient_mu 0.091 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.758 _exptl_absorpt_correction_type multi-scan _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.289 _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 448 _exptl_crystal_size_max 0.37 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.490 _refine_diff_density_min -0.277 _refine_diff_density_rms 0.074 _refine_ls_extinction_coef 0.28(5) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.030 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 137 _refine_ls_number_reflns 1904 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.030 _refine_ls_R_factor_all 0.0973 _refine_ls_R_factor_gt 0.0866 _refine_ls_shift/su_max 0.004 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.2500P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2872 _refine_ls_wR_factor_ref 0.3137 _reflns_number_gt 1395 _reflns_number_total 1904 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ol7b00068_si_003.cif _cod_data_source_block a _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 4268 2015-11-12 08:31:59Z antanas ; _cod_original_cell_volume 1073.4(9) _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 1545303 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.2149(2) 0.5756(2) 0.1387(2) 0.0759(8) Uani 1 1 d . O2 O 0.0350(2) 0.6313(2) 0.1142(3) 0.0911(10) Uani 1 1 d . O3 O 0.42195(19) 0.7230(2) -0.1998(3) 0.0800(9) Uani 1 1 d . C4 C 0.2599(2) 0.4545(2) -0.3144(3) 0.0559(8) Uani 1 1 d . C5 C 0.2228(2) 0.6295(2) -0.1265(3) 0.0570(8) Uani 1 1 d . H5A H 0.2511 0.7125 -0.1001 0.068 Uiso 1 1 calc R C6 C 0.3317(3) 0.3936(3) -0.1503(4) 0.0679(9) Uani 1 1 d . H6A H 0.4113 0.4229 -0.1169 0.081 Uiso 1 1 calc R H6B H 0.3331 0.3070 -0.1680 0.081 Uiso 1 1 calc R C7 C 0.0974(2) 0.6277(3) -0.1326(4) 0.0634(9) Uani 1 1 d . H7A H 0.0579 0.7025 -0.1783 0.076 Uiso 1 1 calc R H7B H 0.0553 0.5604 -0.1992 0.076 Uiso 1 1 calc R C8 C 0.2818(3) 0.4185(3) -0.0096(4) 0.0706(10) Uani 1 1 d . H8A H 0.2024 0.3886 -0.0424 0.085 Uiso 1 1 calc R H8B H 0.3275 0.3756 0.0908 0.085 Uiso 1 1 calc R C9 C 0.3722(3) 0.6371(3) -0.2786(4) 0.0640(9) Uani 1 1 d . C10 C 0.3288(3) 0.4527(3) -0.4377(4) 0.0716(9) Uani 1 1 d . H10A H 0.3704 0.3769 -0.4291 0.086 Uiso 1 1 calc R H10B H 0.2764 0.4620 -0.5521 0.086 Uiso 1 1 calc R C11 C 0.1089(3) 0.6132(3) 0.0490(4) 0.0719(10) Uani 1 1 d . C12 C 0.2830(2) 0.5524(3) 0.0281(4) 0.0648(9) Uani 1 1 d . H12A H 0.3634 0.5801 0.0816 0.078 Uiso 1 1 calc R C13 C 0.2520(2) 0.5906(2) -0.2801(3) 0.0548(8) Uani 1 1 d . H13A H 0.1929 0.6255 -0.3786 0.066 Uiso 1 1 calc R C14 C 0.4146(3) 0.5586(3) -0.3891(4) 0.0700(9) Uani 1 1 d . H14A H 0.4929 0.5299 -0.3299 0.084 Uiso 1 1 calc R H14B H 0.4152 0.6025 -0.4881 0.084 Uiso 1 1 calc R C15 C 0.1428(3) 0.3915(3) -0.3906(4) 0.0834(11) Uani 1 1 d . H15A H 0.1554 0.3078 -0.4094 0.125 Uiso 1 1 calc R H15B H 0.1001 0.4292 -0.4953 0.125 Uiso 1 1 calc R H15C H 0.0991 0.3977 -0.3150 0.125 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0922(17) 0.0860(17) 0.0601(13) -0.0037(10) 0.0394(11) -0.0092(11) O2 0.1084(19) 0.0833(17) 0.115(2) -0.0227(13) 0.0812(16) -0.0194(13) O3 0.0858(16) 0.0704(14) 0.0993(16) -0.0119(11) 0.0514(13) -0.0202(11) C4 0.0612(16) 0.0522(15) 0.0591(15) -0.0050(10) 0.0265(12) 0.0053(10) C5 0.0691(17) 0.0455(14) 0.0624(16) 0.0004(10) 0.0298(12) -0.0058(11) C6 0.0762(18) 0.0512(15) 0.0808(19) 0.0114(13) 0.0321(15) 0.0139(13) C7 0.0710(18) 0.0567(16) 0.0738(18) 0.0006(12) 0.0392(13) 0.0055(12) C8 0.078(2) 0.0624(18) 0.0731(18) 0.0199(13) 0.0270(15) 0.0046(13) C9 0.0725(18) 0.0594(17) 0.0713(17) 0.0096(12) 0.0390(14) 0.0035(12) C10 0.085(2) 0.0704(19) 0.0711(18) -0.0059(13) 0.0411(15) 0.0140(15) C11 0.082(2) 0.0628(17) 0.089(2) -0.0189(14) 0.0530(18) -0.0148(14) C12 0.0634(17) 0.0712(19) 0.0626(16) -0.0034(12) 0.0248(13) -0.0016(12) C13 0.0603(16) 0.0506(15) 0.0566(14) 0.0049(10) 0.0238(11) 0.0070(11) C14 0.0723(19) 0.0740(19) 0.0775(18) 0.0094(13) 0.0433(14) 0.0111(13) C15 0.083(2) 0.076(2) 0.094(2) -0.0222(17) 0.0326(17) -0.0066(17) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C11 O1 C12 109.9(2) C15 C4 C6 110.7(3) C15 C4 C10 110.6(2) C6 C4 C10 109.5(2) C15 C4 C13 114.7(2) C6 C4 C13 108.2(2) C10 C4 C13 102.8(2) C7 C5 C13 119.3(2) C7 C5 C12 102.3(2) C13 C5 C12 113.0(2) C4 C6 C8 111.8(2) C11 C7 C5 102.6(2) C12 C8 C6 111.2(2) O3 C9 C14 126.4(3) O3 C9 C13 124.6(3) C14 C9 C13 109.0(3) C14 C10 C4 106.6(2) O2 C11 O1 121.1(3) O2 C11 C7 127.9(3) O1 C11 C7 111.0(2) O1 C12 C8 109.7(2) O1 C12 C5 103.6(2) C8 C12 C5 113.4(2) C5 C13 C4 119.0(2) C5 C13 C9 112.9(2) C4 C13 C9 102.0(2) C9 C14 C10 105.5(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C11 1.326(4) O1 C12 1.465(4) O2 C11 1.217(4) O3 C9 1.202(4) C4 C15 1.523(4) C4 C6 1.528(4) C4 C10 1.540(4) C4 C13 1.543(4) C5 C7 1.510(4) C5 C13 1.519(4) C5 C12 1.528(4) C6 C8 1.530(5) C7 C11 1.503(4) C8 C12 1.515(4) C9 C14 1.488(4) C9 C13 1.547(4) C10 C14 1.531(5)