#------------------------------------------------------------------------------ #$Date: 2019-06-13 11:04:34 +0300 (Thu, 13 Jun 2019) $ #$Revision: 215925 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/55/13/1551396.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1551396 loop_ _publ_author_name 'Jaeheung Cho' 'Ritimukta Sarangi' 'Jamespandi Annaraj' 'Sung Yeon Kim' 'Minoru Kubo' 'Takashi Ogura' 'Edward I. Solomon' 'Wonwoo Nam' _publ_section_title ; Geometric and electronic structure and reactivity of a mononuclear 'side-on' nickel(iii)-peroxo complex ; _journal_name_full 'Nature Chemistry' _journal_page_first 568 _journal_page_last 572 _journal_paper_doi 10.1038/nchem.366 _journal_volume 1 _journal_year 2009 _chemical_formula_sum 'C14 Cl2 N5 Ni O8' _chemical_formula_weight 495.80 _space_group_IT_number 129 _space_group_name_Hall '-P 4a 2a' _space_group_name_H-M_alt 'P 4/n m m :2' _symmetry_cell_setting tetragonal _symmetry_space_group_name_H-M 'P 4/n m m :2' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.969(3) _cell_length_b 8.969(3) _cell_length_c 14.521(11) _cell_measurement_reflns_used 1379 _cell_measurement_temperature 273(2) _cell_measurement_theta_max 21.40 _cell_measurement_theta_min 2.67 _cell_volume 1168.1(10) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 273(2) _diffrn_measured_fraction_theta_full 0.974 _diffrn_measured_fraction_theta_max 0.974 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1321 _diffrn_reflns_av_sigmaI/netI 0.0845 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 6658 _diffrn_reflns_theta_full 28.36 _diffrn_reflns_theta_max 28.36 _diffrn_reflns_theta_min 2.67 _exptl_absorpt_coefficient_mu 1.104 _exptl_absorpt_correction_type none _exptl_crystal_colour Purple _exptl_crystal_density_diffrn 1.410 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 490 _exptl_crystal_size_max 0.3 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.1 _refine_diff_density_max 0.524 _refine_diff_density_min -0.617 _refine_diff_density_rms 0.113 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.971 _refine_ls_matrix_type full _refine_ls_number_parameters 58 _refine_ls_number_reflns 868 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.971 _refine_ls_R_factor_all 0.0909 _refine_ls_R_factor_gt 0.0712 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1380P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1963 _refine_ls_wR_factor_ref 0.2047 _reflns_number_gt 548 _reflns_number_total 868 _reflns_threshold_expression >2sigma(I) _cod_data_source_file nchem.366-s3.cif _cod_data_source_block cho082p4nmm _cod_depositor_comments ; The following automatic conversions were performed: data item '_symmetry_cell_setting' value 'Tetragonal' was changed to 'tetragonal' in accordance with the built-in table derived from the CIF Core dictionary named 'cif_core.dic' version 2.4.5 last updated on 2014-11-21. Automatic conversion script Id: cif_fix_values 6909 2019-04-08 15:41:33Z antanas ; _cod_original_cell_volume 1168.0(11) _cod_original_sg_symbol_H-M P4/nmm _cod_database_code 1551396 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y+1/2, z' '-y+1/2, x, z' 'y, -x+1/2, z' '-x, y+1/2, -z' 'x+1/2, -y, -z' 'y+1/2, x+1/2, -z' '-y, -x, -z' '-x, -y, -z' 'x-1/2, y-1/2, -z' 'y-1/2, -x, -z' '-y, x-1/2, -z' 'x, -y-1/2, z' '-x-1/2, y, z' '-y-1/2, -x-1/2, z' 'y, x, z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Ni1 Ni 0.7500 0.7500 0.75624(8) 0.0434(5) Uani 1 8 d S . . N1 N 0.5934(4) 0.9066(4) 0.7203(3) 0.0595(12) Uani 1 2 d S . . C4 C 0.7500 0.7500 1.0688(9) 0.109(7) Uani 1 8 d S . . C3 C 0.7500 0.7500 0.9690(9) 0.072(3) Uani 1 8 d S . . C2 C 0.5144(6) 0.9856(6) 0.7976(6) 0.108(3) Uani 1 2 d S . . C1 C 0.6764(6) 1.0176(7) 0.6645(5) 0.130(3) Uani 1 1 d . . . N2 N 0.7500 0.7500 0.8918(7) 0.064(3) Uani 1 8 d S . . Cl1 Cl 0.7500 0.7500 0.39510(19) 0.0581(8) Uani 1 8 d S . . O1 O 0.7500 0.7500 0.2978(7) 0.120(4) Uani 1 8 d S . . Cl2 Cl 0.2500 0.7500 1.0000 0.0787(10) Uani 1 8 d S . . O2 O 0.7500 0.8928(13) 0.4302(6) 0.178(5) Uani 0.75 2 d SP . . O4 O 0.2500 0.7500 0.9020(11) 0.162(10) Uani 0.50 4 d SP . . O3 O 0.2500 0.8884(17) 0.9708(14) 0.318(10) Uani 0.75 2 d SP . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ni1 0.0409(6) 0.0409(6) 0.0484(8) 0.000 0.000 0.000 N1 0.0577(18) 0.0577(18) 0.063(3) 0.0028(15) -0.0028(15) 0.012(2) C4 0.142(11) 0.142(11) 0.042(7) 0.000 0.000 0.000 C3 0.078(5) 0.078(5) 0.059(8) 0.000 0.000 0.000 C2 0.114(5) 0.114(5) 0.095(5) -0.010(3) 0.010(3) 0.062(6) C1 0.082(4) 0.141(6) 0.169(6) 0.093(4) 0.019(4) 0.021(4) N2 0.070(4) 0.070(4) 0.052(5) 0.000 0.000 0.000 Cl1 0.0625(11) 0.0625(11) 0.0494(13) 0.000 0.000 0.000 O1 0.153(7) 0.153(7) 0.055(5) 0.000 0.000 0.000 Cl2 0.0852(15) 0.0852(15) 0.0656(19) 0.000 0.000 0.000 O2 0.306(14) 0.105(7) 0.122(6) -0.038(5) 0.000 0.000 O4 0.134(17) 0.28(4) 0.075(11) 0.000 0.000 0.000 O3 0.45(3) 0.141(12) 0.36(2) 0.156(13) 0.000 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N2 Ni1 N1 104.73(14) . 3_655 N2 Ni1 N1 104.73(14) . 4_565 N1 Ni1 N1 150.5(3) 3_655 4_565 N2 Ni1 N1 104.73(14) . 2_665 N1 Ni1 N1 86.29(7) 3_655 2_665 N1 Ni1 N1 86.29(7) 4_565 2_665 N2 Ni1 N1 104.73(14) . . N1 Ni1 N1 86.29(7) 3_655 . N1 Ni1 N1 86.29(7) 4_565 . N1 Ni1 N1 150.5(3) 2_665 . C1 N1 C1 112.0(7) 15_775 . C1 N1 C2 109.1(4) 15_775 . C1 N1 C2 109.1(4) . . C1 N1 Ni1 104.8(3) 15_775 . C1 N1 Ni1 104.8(3) . . C2 N1 Ni1 117.0(4) . . N2 C3 C4 180.000(7) . . C1 C1 N1 120.1(3) 14_755 . C3 N2 Ni1 180.000(4) . . O2 Cl1 O2 136.6(9) 4_565 3_655 O2 Cl1 O2 82.1(3) 4_565 2_665 O2 Cl1 O2 82.1(3) 3_655 2_665 O2 Cl1 O2 82.1(3) 4_565 . O2 Cl1 O2 82.1(3) 3_655 . O2 Cl1 O2 136.6(9) 2_665 . O2 Cl1 O1 111.7(4) 4_565 . O2 Cl1 O1 111.7(4) 3_655 . O2 Cl1 O1 111.7(4) 2_665 . O2 Cl1 O1 111.7(4) . . O3 Cl2 O3 142.3(19) . 2_565 O3 Cl2 O3 96.0(6) . 11_567 O3 Cl2 O3 96.0(6) 2_565 11_567 O3 Cl2 O3 96.0(6) . 12_667 O3 Cl2 O3 96.0(6) 2_565 12_667 O3 Cl2 O3 142.3(19) 11_567 12_667 O3 Cl2 O4 108.9(10) . 11_567 O3 Cl2 O4 108.9(10) 2_565 11_567 O3 Cl2 O4 71.1(10) 11_567 11_567 O3 Cl2 O4 71.1(10) 12_667 11_567 O3 Cl2 O4 71.1(10) . . O3 Cl2 O4 71.1(10) 2_565 . O3 Cl2 O4 108.9(10) 11_567 . O3 Cl2 O4 108.9(10) 12_667 . O4 Cl2 O4 180.000(4) 11_567 . Cl1 O2 O2 48.93(15) . 3_655 Cl1 O2 O2 48.93(15) . 4_565 O2 O2 O2 89.999(2) 3_655 4_565 Cl2 O4 O3 51.2(6) . . Cl2 O4 O3 51.2(6) . 2_565 O3 O4 O3 102.4(13) . 2_565 Cl2 O3 O4 57.7(10) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Ni1 N2 1.968(10) . Ni1 N1 2.053(5) 3_655 Ni1 N1 2.053(5) 4_565 Ni1 N1 2.053(5) 2_665 Ni1 N1 2.053(5) . N1 C1 1.484(6) 15_775 N1 C1 1.484(6) . N1 C2 1.505(9) . C4 C3 1.450(16) . C3 N2 1.121(15) . C1 C1 1.320(11) 14_755 Cl1 O2 1.378(10) 4_565 Cl1 O2 1.378(10) 3_655 Cl1 O2 1.378(10) 2_665 Cl1 O2 1.378(10) . Cl1 O1 1.412(10) . Cl2 O3 1.311(12) . Cl2 O3 1.311(12) 2_565 Cl2 O3 1.311(12) 11_567 Cl2 O3 1.311(12) 12_667 Cl2 O4 1.422(17) 11_567 Cl2 O4 1.422(17) . O2 O2 1.811(16) 3_655 O2 O2 1.811(16) 4_565 O4 O3 1.59(2) . O4 O3 1.59(2) 2_565 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 N2 Ni1 N1 C1 -121.0(4) . . . 15_775 N1 Ni1 N1 C1 -16.7(5) 3_655 . . 15_775 N1 Ni1 N1 C1 134.8(3) 4_565 . . 15_775 N1 Ni1 N1 C1 59.0(4) 2_665 . . 15_775 N2 Ni1 N1 C1 121.0(4) . . . . N1 Ni1 N1 C1 -134.8(3) 3_655 . . . N1 Ni1 N1 C1 16.7(5) 4_565 . . . N1 Ni1 N1 C1 -59.0(4) 2_665 . . . N2 Ni1 N1 C2 0.000(2) . . . . N1 Ni1 N1 C2 104.27(12) 3_655 . . . N1 Ni1 N1 C2 -104.27(12) 4_565 . . . N1 Ni1 N1 C2 180.000(2) 2_665 . . . C1 N1 C1 C1 -127.0(3) 15_775 . . 14_755 C2 N1 C1 C1 112.0(4) . . . 14_755 Ni1 N1 C1 C1 -14.0(4) . . . 14_755 C4 C3 N2 Ni1 0(100) . . . . N1 Ni1 N2 C3 105(100) 3_655 . . . N1 Ni1 N2 C3 -75(100) 4_565 . . . N1 Ni1 N2 C3 15(100) 2_665 . . . N1 Ni1 N2 C3 -165(100) . . . . O2 Cl1 O2 O2 -139.4(7) 4_565 . . 3_655 O2 Cl1 O2 O2 -69.7(4) 2_665 . . 3_655 O1 Cl1 O2 O2 110.3(4) . . . 3_655 O2 Cl1 O2 O2 139.4(7) 3_655 . . 4_565 O2 Cl1 O2 O2 69.7(4) 2_665 . . 4_565 O1 Cl1 O2 O2 -110.3(4) . . . 4_565 O3 Cl2 O4 O3 180.000(10) 2_565 . . . O3 Cl2 O4 O3 -90.000(10) 11_567 . . . O3 Cl2 O4 O3 90.000(10) 12_667 . . . O4 Cl2 O4 O3 0(100) 11_567 . . . O3 Cl2 O4 O3 180.000(5) . . . 2_565 O3 Cl2 O4 O3 90.000(5) 11_567 . . 2_565 O3 Cl2 O4 O3 -90.000(5) 12_667 . . 2_565 O4 Cl2 O4 O3 180(100) 11_567 . . 2_565 O3 Cl2 O3 O4 0.000(7) 2_565 . . . O3 Cl2 O3 O4 107.9(8) 11_567 . . . O3 Cl2 O3 O4 -107.9(8) 12_667 . . . O4 Cl2 O3 O4 180.000(10) 11_567 . . . O3 O4 O3 Cl2 0.000(4) 2_565 . . .