#------------------------------------------------------------------------------ #$Date: 2015-04-02 14:22:18 +0300 (Thu, 02 Apr 2015) $ #$Revision: 134621 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/05/2010588.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2010588 loop_ _publ_author_name 'Lee, Yong-Min' 'Chung, Geewon' 'Kwon, Mi-A' 'Choi, Sung-Nak' _publ_section_title ; ({-})-Sparteine copper(II) diacetate ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 67 _journal_page_last 68 _journal_paper_doi 10.1107/S0108270199012160 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac '[Cu (C2 H3 O2)2 (C15 H26 N2)]' _chemical_formula_sum 'C19 H32 Cu N2 O4' _chemical_formula_weight 416.01 _chemical_name_common '(-)-sparteine copper(II) diacetate' _chemical_name_systematic ; {1,3,4,7,7a,8,9,10,11,13,14,14a-dodecahydro-7,14-methano- 2H,6H-dipyrido[1,2-a:1',2'-e][1,5]diazocine-N,N'}bis(acetato- O,O')copper(II) ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.000 _cell_angle_beta 97.954(8) _cell_angle_gamma 90.000 _cell_formula_units_Z 2 _cell_length_a 8.0507(8) _cell_length_b 12.0791(12) _cell_length_c 10.2946(8) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13.04 _cell_measurement_theta_min 7.32 _cell_volume 991.47(16) _computing_cell_refinement 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'Xtal3.2 Reference Manual (Hall et al., 1992)' _computing_molecular_graphics 'ZORTEP (Zsolnai, 1996)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .999 _diffrn_measured_fraction_theta_max .999 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71069 _diffrn_reflns_av_R_equivalents .020 _diffrn_reflns_av_sigmaI/netI .011 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -2 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 2013 _diffrn_reflns_theta_full 24.97 _diffrn_reflns_theta_max 24.97 _diffrn_reflns_theta_min 2.00 _diffrn_standards_decay_% none _diffrn_standards_interval_time 3600 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.127 _exptl_absorpt_correction_T_max .754 _exptl_absorpt_correction_T_min .543 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.393 _exptl_crystal_density_method 'not measured' _exptl_crystal_description cube _exptl_crystal_F_000 442 _exptl_crystal_size_max .60 _exptl_crystal_size_mid .45 _exptl_crystal_size_min .25 _refine_diff_density_max .373 _refine_diff_density_min -.509 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack -.03(3) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.315 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 230 _refine_ls_number_reflns 1838 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.314 _refine_ls_R_factor_all .054 _refine_ls_R_factor_gt .042 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0136P)^2^+1.9871P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .101 _reflns_number_gt 1626 _reflns_number_total 1838 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ta1266.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0136P)^2^+1.9871P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0136P)^2^+1.9871P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_database_code 2010588 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cu .52306(8) .05527(7) .14475(6) .0353(2) Uani d . 1 . . Cu N1 .2910(7) -.0060(5) .0938(6) .0400(13) Uani d . 1 . . N N9 .5557(7) -.0463(6) .3057(6) .0432(14) Uani d . 1 . . N C2 .2049(8) .0495(10) -.0262(6) .0498(17) Uani d . 1 . . C H2A .0951 .0165 -.0503 .060 Uiso calc R 1 . . H H2B .2692 .0379 -.0980 .060 Uiso calc R 1 . . H C3 .1856(11) .1715(8) -.0043(9) .064(2) Uani d . 1 . . C H3A .1295 .2055 -.0839 .077 Uiso calc R 1 . . H H3B .2955 .2052 .0163 .077 Uiso calc R 1 . . H C4 .0843(10) .1916(8) .1074(9) .063(2) Uani d . 1 . . C H4A .0820 .2702 .1261 .076 Uiso calc R 1 . . H H4B -.0302 .1670 .0817 .076 Uiso calc R 1 . . H C5 .1602(12) .1299(8) .2295(10) .053(2) Uani d . 1 . . C H5A .0885 .1383 .2972 .064 Uiso calc R 1 . . H H5B .2688 .1615 .2619 .064 Uiso calc R 1 . . H C6 .1809(11) .0073(7) .2011(9) .042(2) Uani d . 1 . . C H6 .0697 -.0217 .1670 .051 Uiso calc R 1 . . H C7 .2482(9) -.0617(7) .3210(7) .0477(18) Uani d . 1 . . C H7 .1691 -.0534 .3846 .057 Uiso calc R 1 . . H C8 .3742(10) -.1925(7) .1845(7) .0499(19) Uani d . 1 . . C H8 .3764 -.2702 .1574 .060 Uiso calc R 1 . . H C10 .7244(9) -.0206(9) .3780(7) .057(2) Uani d . 1 . . C H10A .7182 .0492 .4239 .069 Uiso calc R 1 . . H H10B .8024 -.0110 .3151 .069 Uiso calc R 1 . . H C11 .7929(11) -.1083(10) .4764(8) .072(3) Uani d . 1 . . C H11A .9052 -.0879 .5156 .087 Uiso calc R 1 . . H H11B .7229 -.1123 .5458 .087 Uiso calc R 1 . . H C12 .7977(12) -.2205(10) .4117(9) .079(3) Uani d . 1 . . C H12A .8760 -.2189 .3482 .095 Uiso calc R 1 . . H H12B .8354 -.2760 .4773 .095 Uiso calc R 1 . . H C13 .6264(12) -.2498(9) .3447(9) .069(3) Uani d . 1 . . C H13A .5532 -.2609 .4109 .083 Uiso calc R 1 . . H H13B .6331 -.3194 .2987 .083 Uiso calc R 1 . . H C14 .5482(10) -.1632(7) .2475(7) .0441(17) Uani d . 1 . . C H14 .6177 -.1615 .1765 .053 Uiso calc R 1 . . H C15 .4225(9) -.0297(8) .3915(7) .0504(19) Uani d . 1 . . C H15A .4214 .0474 .4179 .060 Uiso calc R 1 . . H H15B .4483 -.0742 .4701 .060 Uiso calc R 1 . . H C16 .3099(10) -.1258(6) .0648(8) .0496(19) Uani d . 1 . . C H16A .3866 -.1339 .0006 .060 Uiso calc R 1 . . H H16B .2020 -.1551 .0265 .060 Uiso calc R 1 . . H C17 .2487(10) -.1836(7) .2835(9) .055(2) Uani d . 1 . . C H17A .1378 -.2070 .2441 .066 Uiso calc R 1 . . H H17B .2839 -.2291 .3600 .066 Uiso calc R 1 . . H C18 .6499(10) .2447(8) .2835(8) .0513(19) Uani d . 1 . . C C19 .7790(9) .3333(7) .3132(7) .070(3) Uani d . 1 . . C H19A .7245 .4028 .3232 .106 Uiso calc R 1 . . H H19B .8449 .3384 .2425 .106 Uiso calc R 1 . . H H19C .8506 .3155 .3929 .106 Uiso calc R 1 . . H C20 .6865(6) .0045(5) -.0544(5) .0395(16) Uani d . 1 . . C C21 .7282(7) -.0045(5) -.1936(4) .069(3) Uani d . 1 . . C H21A .8384 .0247 -.1970 .103 Uiso calc R 1 . . H H21B .6477 .0370 -.2518 .103 Uiso calc R 1 . . H H21C .7246 -.0808 -.2200 .103 Uiso calc R 1 . . H O1 .6750(7) .1758(5) .1956(5) .0573(15) Uani d . 1 . . O O2 .5343(8) .2397(7) .3496(8) .085(2) Uani d . 1 . . O O3 .5602(5) .0652(7) -.0404(4) .0472(11) Uani d . 1 . . O O4 .7681(7) -.0461(5) .0346(5) .0571(14) Uani d . 1 . . O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu .0352(4) .0414(4) .0303(3) -.0042(5) .0084(3) -.0029(5) N1 .036(3) .044(3) .040(3) .000(3) .006(2) -.005(3) N9 .040(3) .054(4) .037(3) .000(3) .011(3) .002(3) C2 .039(3) .061(5) .046(3) .005(5) -.005(3) .001(6) C3 .056(5) .066(6) .068(6) .005(5) .004(4) .018(5) C4 .043(4) .058(5) .089(6) .010(4) .010(4) .002(5) C5 .045(5) .052(5) .066(6) -.002(4) .019(4) -.007(5) C6 .029(4) .047(4) .052(5) -.005(3) .007(3) .002(4) C7 .040(4) .056(5) .049(4) -.005(4) .017(3) .009(4) C8 .062(5) .041(4) .049(4) .000(4) .017(4) .005(4) C10 .037(4) .098(7) .036(4) -.003(4) -.001(3) -.003(4) C11 .055(5) .113(9) .048(5) .017(6) .005(4) .013(6) C12 .071(6) .111(9) .056(5) .041(6) .016(5) .034(6) C13 .083(6) .071(6) .059(5) .026(5) .033(5) .021(5) C14 .051(4) .049(5) .035(4) .006(4) .020(3) .005(3) C15 .056(4) .067(5) .031(3) -.003(4) .018(3) -.013(4) C16 .053(4) .045(4) .050(4) -.006(4) .005(4) -.015(4) C17 .052(5) .049(5) .070(5) -.009(4) .026(4) .009(4) C18 .047(4) .058(5) .048(4) -.014(4) .005(4) -.006(4) C19 .080(6) .076(7) .058(5) -.031(5) .020(5) -.031(5) C20 .048(4) .040(4) .032(3) -.005(3) .011(3) -.002(3) C21 .082(6) .087(7) .042(4) .020(5) .025(4) -.007(5) O1 .066(3) .061(4) .050(3) -.023(3) .024(3) -.021(3) O2 .063(4) .092(5) .110(6) -.022(4) .047(4) -.038(5) O3 .052(2) .055(3) .035(2) .005(4) .0124(18) .002(3) O4 .068(4) .057(4) .047(3) .005(3) .008(3) .003(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu .3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 Cu O3 92.4(3) yes O1 Cu N1 151.8(2) yes O3 Cu N1 91.7(2) yes O1 Cu N9 103.1(3) yes O3 Cu N9 142.9(3) yes N1 Cu N9 90.1(2) yes C2 N1 C16 108.6(7) ? C2 N1 C6 107.7(6) ? C16 N1 C6 109.5(6) ? C2 N1 Cu 111.1(5) ? C16 N1 Cu 107.0(5) ? C6 N1 Cu 112.8(5) ? C10 N9 C15 110.8(6) ? C10 N9 C14 111.9(6) ? C15 N9 C14 111.3(6) ? C10 N9 Cu 106.6(5) ? C15 N9 Cu 112.0(5) ? C14 N9 Cu 104.0(4) ? N1 C2 C3 111.3(7) ? C2 C3 C4 110.3(8) ? C5 C4 C3 110.6(7) ? C4 C5 C6 111.2(9) ? N1 C6 C5 109.4(6) ? N1 C6 C7 110.7(7) ? C5 C6 C7 114.3(9) ? C17 C7 C6 109.7(7) ? C17 C7 C15 109.2(7) ? C6 C7 C15 116.3(6) ? C14 C8 C16 115.0(6) ? C14 C8 C17 110.9(7) ? C16 C8 C17 108.9(7) ? N9 C10 C11 114.2(8) ? C12 C11 C10 111.2(7) ? C13 C12 C11 109.7(8) ? C12 C13 C14 114.3(8) ? C8 C14 C13 113.4(7) ? C8 C14 N9 111.7(6) ? C13 C14 N9 112.7(7) ? N9 C15 C7 111.7(6) ? N1 C16 C8 112.9(6) ? C7 C17 C8 105.1(6) ? O2 C18 O1 124.9(8) yes O2 C18 C19 118.7(7) ? O1 C18 C19 116.2(6) ? O4 C20 O3 124.0(5) yes O4 C20 C21 120.5(3) ? O3 C20 C21 115.5(3) ? C18 O1 Cu 122.2(5) ? C20 O3 Cu 107.7(4) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu O1 . 1.927(5) yes Cu O3 . 1.973(4) yes Cu N1 . 2.010(6) yes Cu N9 . 2.049(6) yes N1 C2 . 1.489(9) ? N1 C16 . 1.491(9) ? N1 C6 . 1.517(10) ? N9 C10 . 1.488(9) ? N9 C15 . 1.494(8) ? N9 C14 . 1.531(10) ? C2 C3 . 1.502(15) ? C3 C4 . 1.519(12) ? C4 C5 . 1.515(13) ? C5 C6 . 1.523(11) ? C6 C7 . 1.526(11) ? C7 C17 . 1.522(12) ? C7 C15 . 1.538(10) ? C8 C14 . 1.503(11) ? C8 C16 . 1.503(11) ? C8 C17 . 1.535(10) ? C10 C11 . 1.516(12) ? C11 C12 . 1.513(15) ? C12 C13 . 1.496(14) ? C13 C14 . 1.523(11) ? C18 O2 . 1.229(9) yes C18 O1 . 1.266(10) yes C18 C19 . 1.493(9) ? C20 O4 . 1.216(8) yes C20 O3 . 1.278(7) yes C20 C21 . 1.5201(12) ?