#------------------------------------------------------------------------------ #$Date: 2013-12-28 15:58:47 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/17/2011786.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011786 loop_ _publ_author_name 'Neu, Mary P.' 'Johnson, Mitchell T.' 'Matonic, John H.' 'Scott, Brian L.' _publ_section_title ; Actinide interactions with microbial chelators: the dioxobis[pyridine-2,6-bis(monothiocarboxylato)]uranium(VI) ion ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 240 _journal_page_last 242 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac '2C24 H20 P , [U O2 (C7 H3 N O2 S2)2]' _chemical_formula_moiety '2C24 H20 P + , C14 H6 N2 O6 S4 U 2-' _chemical_formula_sum 'C62 H46 N2 O6 P2 S4 U' _chemical_formula_weight 1343.22 _chemical_name_systematic ; bis(tetraphenylphosphonium) dioxobis(pyridine-2,6-dicarbothioate-O,N,O')uranium(VI) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _audit_creation_method SHELXL-97 _cell_angle_alpha 77.8910(10) _cell_angle_beta 81.460(10) _cell_angle_gamma 69.140(10) _cell_formula_units_Z 1 _cell_length_a 9.2351(7) _cell_length_b 11.6070(10) _cell_length_c 13.8070(10) _cell_measurement_reflns_used 4192 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 23.29 _cell_measurement_theta_min 1.51 _cell_volume 1347.8(2) _computing_cell_refinement 'SAINT (Bruker, 1998)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics 'SHELXTL (Bruker, 1997)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean '8.192 pixels/mm' _diffrn_measured_fraction_theta_full .953 _diffrn_measured_fraction_theta_max .823 _diffrn_measurement_device_type 'Siemens P4/PC CCD area-detector' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .031 _diffrn_reflns_av_sigmaI/netI .055 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 9541 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 28.45 _diffrn_reflns_theta_min 1.51 _diffrn_standards_decay_% <2 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 3.28 _exptl_absorpt_correction_T_max .52 _exptl_absorpt_correction_T_min .31 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS in SHELXL97; Sheldrick, 1997)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.655 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 666 _exptl_crystal_size_max .32 _exptl_crystal_size_mid .25 _exptl_crystal_size_min .20 _refine_diff_density_max 1.21 _refine_diff_density_min -1.95 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.04 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 349 _refine_ls_number_reflns 5605 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.042 _refine_ls_R_factor_all .032 _refine_ls_R_factor_gt .030 _refine_ls_shift/su_max .001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0345P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .073 _reflns_number_gt 5485 _reflns_number_total 5605 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bk1565.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (8 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (8 times). '_geom_angle_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (7 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1347.7(2) _cod_database_code 2011786 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol U1 1 0.5 1 .01711(6) Uani d S 1 . . U P1 1.91206(10) 0.82300(8) 1.31795(6) .01793(18) Uani d . 1 . . P S1 1.22784(13) 0.65734(11) .66912(7) .0359(2) Uani d . 1 . . S S2 1.46942(13) 0.19370(10) 1.16174(8) .0384(2) Uani d . 1 . . S O1 1.0710(3) 0.5803(3) .82793(18) .0287(6) Uani d . 1 . . O O2 1.2009(3) 0.3387(2) 1.0960(2) .0291(6) Uani d . 1 . . O O1U 1.0284(3) 0.6208(2) 1.04690(19) .0260(5) Uani d . 1 . . O N1 1.2961(3) 0.4462(3) .9324(2) .0188(6) Uani d . 1 . . N C1 1.2009(4) 0.5838(3) .7849(3) .0218(7) Uani d . 1 . . C C2 1.3353(4) 0.5112(3) .8464(2) .0206(7) Uani d . 1 . . C C3 1.4876(4) 0.5073(3) .8184(3) .0242(7) Uani d . 1 . . C H3A 1.5115 0.5550 .7593 .029 Uiso calc R 1 . . H C4 1.6031(4) 0.4314(3) .8795(3) .0252(8) Uani d . 1 . . C H4A 1.7055 0.4286 .8629 .030 Uiso calc R 1 . . H C5 1.5636(4) 0.3593(3) .9663(3) .0232(7) Uani d . 1 . . C H5A 1.6399 0.3050 1.0072 .028 Uiso calc R 1 . . H C6 1.4086(4) 0.3695(3) .9911(2) .0192(7) Uani d . 1 . . C C7 1.3475(4) 0.3031(3) 1.0837(3) .0224(7) Uani d . 1 . . C C20 1.8303(4) 0.8952(3) 1.4256(3) .0219(7) Uani d . 1 . . C C21 1.7228(5) 1.0161(4) 1.4126(3) .0343(9) Uani d . 1 . . C H21A 1.7016 1.0602 1.3489 .041 Uiso calc R 1 . . H C22 1.6479(6) 1.0703(4) 1.4940(4) .0470(12) Uani d . 1 . . C H22A 1.5783 1.1518 1.4852 .056 Uiso calc R 1 . . H C23 1.6759(6) 1.0039(4) 1.5890(3) .0432(11) Uani d . 1 . . C H23A 1.6239 1.0406 1.6438 .052 Uiso calc R 1 . . H C24 1.7796(6) 0.8847(4) 1.6026(3) .0379(10) Uani d . 1 . . C H24A 1.7967 0.8404 1.6666 .045 Uiso calc R 1 . . H C25 1.8599(5) 0.8288(4) 1.5215(3) .0275(8) Uani d . 1 . . C H25A 1.9322 0.7484 1.5311 .033 Uiso calc R 1 . . H C30 1.7515(4) 0.8058(3) 1.2705(3) .0200(7) Uani d . 1 . . C C31 1.6867(4) 0.8810(3) 1.1847(3) .0248(8) Uani d . 1 . . C H31A 1.7329 0.9364 1.1460 .030 Uiso calc R 1 . . H C32 1.5528(5) 0.8732(4) 1.1570(3) .0347(9) Uani d . 1 . . C H32A 1.5094 0.9232 1.0994 .042 Uiso calc R 1 . . H C33 1.4837(5) 0.7917(4) 1.2144(3) .0341(10) Uani d . 1 . . C H33A 1.3929 0.7877 1.1960 .041 Uiso calc R 1 . . H C34 1.5484(5) 0.7160(4) 1.2990(3) .0332(9) Uani d . 1 . . C H34A 1.5020 0.6601 1.3367 .040 Uiso calc R 1 . . H C35 1.6815(5) 0.7224(3) 1.3281(3) .0279(8) Uani d . 1 . . C H35A 1.7244 0.6716 1.3856 .033 Uiso calc R 1 . . H C40 2.0520(4) 0.6700(3) 1.3483(2) .0211(7) Uani d . 1 . . C C41 2.1702(5) 0.6498(4) 1.4103(3) .0284(8) Uani d . 1 . . C H41A 2.1749 0.7154 1.4370 .034 Uiso calc R 1 . . H C42 2.2787(5) 0.5319(4) 1.4311(3) .0348(9) Uani d . 1 . . C H42A 2.3554 0.5176 1.4732 .042 Uiso calc R 1 . . H C43 2.2739(5) 0.4345(4) 1.3894(3) .0346(9) Uani d . 1 . . C H43A 2.3472 0.3552 1.4040 .042 Uiso calc R 1 . . H C44 2.1608(5) 0.4545(4) 1.3261(3) .0317(9) Uani d . 1 . . C H44A 2.1595 0.3893 1.2973 .038 Uiso calc R 1 . . H C45 2.0500(5) 0.5717(3) 1.3062(3) .0259(8) Uani d . 1 . . C H45A 1.9734 0.5850 1.2643 .031 Uiso calc R 1 . . H C50 2.0018(4) 0.9167(3) 1.2267(2) .0200(7) Uani d . 1 . . C C51 2.0085(5) 1.0293(4) 1.2428(3) .0297(8) Uani d . 1 . . C H51A 1.9637 1.0586 1.3017 .036 Uiso calc R 1 . . H C52 2.0818(5) 1.0976(4) 1.1711(3) .0339(9) Uani d . 1 . . C H52A 2.0848 1.1733 1.1814 .041 Uiso calc R 1 . . H C53 2.1503(5) 1.0530(4) 1.0844(3) .0295(8) Uani d . 1 . . C H53A 2.2001 1.0987 1.0367 .035 Uiso calc R 1 . . H C54 2.1456(5) 0.9406(4) 1.0677(3) .0282(8) Uani d . 1 . . C H54A 2.1927 0.9113 1.0091 .034 Uiso calc R 1 . . H C55 2.0711(4) 0.8722(3) 1.1380(3) .0235(7) Uani d . 1 . . C H55A 2.0670 0.7973 1.1266 .028 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 U1 .01507(10) .01840(10) .01858(10) -.00667(7) -.00183(7) -.00246(6) P1 .0184(5) .0192(4) .0162(4) -.0070(4) -.0020(3) -.0014(3) S1 .0338(6) .0450(6) .0216(5) -.0109(5) -.0006(4) .0045(4) S2 .0270(6) .0330(5) .0425(6) -.0030(4) -.0093(5) .0124(4) O1 .0213(14) .0381(15) .0223(13) -.0080(12) -.0018(11) .0008(11) O2 .0181(14) .0283(14) .0341(14) -.0060(11) -.0026(11) .0065(11) O1U .0267(14) .0287(13) .0265(13) -.0132(11) -.0011(11) -.0068(11) N1 .0163(15) .0176(13) .0220(14) -.0043(11) -.0004(11) -.0058(11) C1 .0215(19) .0210(17) .0219(17) -.0064(14) .0005(14) -.0041(14) C2 .0223(19) .0220(17) .0184(16) -.0071(14) -.0003(14) -.0066(13) C3 .023(2) .0287(19) .0236(17) -.0114(15) .0037(14) -.0082(15) C4 .0182(19) .0318(19) .0281(18) -.0089(15) .0048(15) -.0140(16) C5 .0170(18) .0257(18) .0276(18) -.0055(14) .0003(14) -.0104(15) C6 .0173(18) .0166(15) .0229(17) -.0035(13) -.0015(14) -.0060(13) C7 .023(2) .0179(16) .0237(17) -.0043(14) -.0026(15) -.0027(13) C20 .0226(19) .0244(17) .0202(16) -.0098(15) .0009(14) -.0054(14) C21 .035(2) .033(2) .028(2) -.0043(18) -.0001(17) -.0042(17) C22 .050(3) .033(2) .049(3) .001(2) .001(2) -.017(2) C23 .055(3) .043(3) .034(2) -.018(2) .009(2) -.019(2) C24 .053(3) .042(2) .0210(19) -.020(2) .0023(18) -.0073(17) C25 .033(2) .0280(19) .0231(18) -.0119(17) -.0024(16) -.0042(15) C30 .0170(18) .0225(17) .0213(16) -.0059(14) -.0023(14) -.0060(13) C31 .023(2) .0265(18) .0236(17) -.0072(15) -.0032(15) -.0013(14) C32 .030(2) .041(2) .032(2) -.0065(18) -.0124(18) -.0062(18) C33 .025(2) .037(2) .045(2) -.0076(18) -.0095(19) -.0198(19) C34 .029(2) .032(2) .045(2) -.0171(18) .0011(18) -.0106(18) C35 .029(2) .0269(19) .0275(19) -.0124(16) -.0025(16) .0007(15) C40 .0211(19) .0208(16) .0189(16) -.0069(14) -.0015(14) .0017(13) C41 .022(2) .034(2) .0290(19) -.0113(16) -.0026(16) -.0023(16) C42 .021(2) .045(2) .033(2) -.0089(18) -.0060(17) .0053(18) C43 .027(2) .0251(19) .035(2) .0012(17) .0042(17) .0084(16) C44 .033(2) .0220(18) .032(2) -.0028(17) .0043(17) -.0035(16) C45 .028(2) .0256(18) .0227(17) -.0087(16) -.0003(15) -.0028(14) C50 .0227(19) .0208(16) .0172(15) -.0103(14) -.0042(14) .0025(13) C51 .037(2) .031(2) .0262(19) -.0173(18) .0004(17) -.0075(16) C52 .047(3) .031(2) .031(2) -.024(2) -.0063(19) .0007(16) C53 .028(2) .035(2) .0258(19) -.0167(17) -.0037(16) .0072(16) C54 .027(2) .0301(19) .0213(17) -.0066(16) .0020(15) -.0005(15) C55 .023(2) .0220(17) .0242(17) -.0067(15) -.0027(15) -.0021(14) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag U1 O1U 2_767 1.774(2) ? U1 O1U . 1.774(2) y U1 O2 2_767 2.434(2) ? U1 O2 . 2.434(2) y U1 O1 . 2.447(3) y U1 O1 2_767 2.447(3) ? U1 N1 . 2.647(3) y U1 N1 2_767 2.647(3) ? P1 C30 . 1.795(3) ? P1 C40 . 1.793(4) ? P1 C50 . 1.792(4) ? P1 C20 . 1.795(4) ? S1 C1 . 1.675(4) y S2 C7 . 1.676(4) y O1 C1 . 1.268(5) y O2 C7 . 1.263(4) y N1 C2 . 1.342(4) ? N1 C6 . 1.347(4) ? C1 C2 . 1.497(5) ? C2 C3 . 1.390(5) ? C3 C4 . 1.383(5) ? C4 C5 . 1.391(5) ? C5 C6 . 1.389(5) ? C6 C7 . 1.493(5) ? C20 C21 . 1.394(5) ? C20 C25 . 1.396(5) ? C21 C22 . 1.376(6) ? C22 C23 . 1.384(7) ? C23 C24 . 1.367(7) ? C24 C25 . 1.392(6) ? C30 C31 . 1.388(5) ? C30 C35 . 1.400(5) ? C31 C32 . 1.385(5) ? C32 C33 . 1.377(6) ? C33 C34 . 1.377(6) ? C34 C35 . 1.379(5) ? C40 C45 . 1.392(5) ? C40 C41 . 1.411(5) ? C41 C42 . 1.380(6) ? C42 C43 . 1.389(6) ? C43 C44 . 1.386(6) ? C44 C45 . 1.382(5) ? C50 C51 . 1.396(5) ? C50 C55 . 1.404(5) ? C51 C52 . 1.385(5) ? C52 C53 . 1.379(6) ? C53 C54 . 1.387(5) ? C54 C55 . 1.383(5) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S .1246 .1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' U U -9.6767 9.6646 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P .1023 .0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1U U1 O1U 2_767 . 180.00(7) y O1U U1 O2 2_767 2_767 92.16(11) ? O1U U1 O2 . 2_767 87.84(10) ? O1U U1 O2 2_767 . 87.84(10) ? O1U U1 O2 . . 92.16(11) y O2 U1 O2 2_767 . 180.00(11) ? O1U U1 O1 2_767 . 86.74(10) ? O1U U1 O1 . . 93.26(10) y O2 U1 O1 2_767 . 61.58(9) ? O2 U1 O1 . . 118.42(9) y O1U U1 O1 2_767 2_767 93.26(10) ? O1U U1 O1 . 2_767 86.74(10) ? O2 U1 O1 2_767 2_767 118.42(9) ? O2 U1 O1 . 2_767 61.58(9) ? O1 U1 O1 . 2_767 180.0 ? O1U U1 N1 2_767 . 95.04(10) ? O1U U1 N1 . . 84.96(10) y O2 U1 N1 2_767 . 120.25(9) ? O2 U1 N1 . . 59.75(9) y O1 U1 N1 . . 59.77(9) y O1 U1 N1 2_767 . 120.23(9) ? O1U U1 N1 2_767 2_767 84.96(10) ? O1U U1 N1 . 2_767 95.04(10) ? O2 U1 N1 2_767 2_767 59.75(9) ? O2 U1 N1 . 2_767 120.25(9) ? O1 U1 N1 . 2_767 120.23(9) ? O1 U1 N1 2_767 2_767 59.77(9) ? N1 U1 N1 . 2_767 180.0 ? C30 P1 C40 . . 107.77(16) ? C30 P1 C50 . . 110.97(16) ? C40 P1 C50 . . 108.83(17) ? C30 P1 C20 . . 105.17(16) ? C40 P1 C20 . . 112.27(16) ? C50 P1 C20 . . 111.73(16) ? C1 O1 U1 . . 130.8(2) ? C7 O2 U1 . . 132.0(2) ? C2 N1 C6 . . 119.2(3) ? C2 N1 U1 . . 119.6(2) ? C6 N1 U1 . . 120.3(2) ? O1 C1 C2 . . 113.7(3) ? O1 C1 S1 . . 125.2(3) ? C2 C1 S1 . . 121.1(3) ? N1 C2 C3 . . 122.0(3) ? N1 C2 C1 . . 113.5(3) ? C3 C2 C1 . . 124.5(3) ? C4 C3 C2 . . 119.1(4) ? C3 C4 C5 . . 118.9(3) ? C6 C5 C4 . . 119.1(3) ? N1 C6 C5 . . 121.6(3) ? N1 C6 C7 . . 113.0(3) ? C5 C6 C7 . . 125.3(3) ? O2 C7 C6 . . 113.9(3) ? O2 C7 S2 . . 125.4(3) ? C6 C7 S2 . . 120.6(3) ? C21 C20 C25 . . 119.7(4) ? C21 C20 P1 . . 118.4(3) ? C25 C20 P1 . . 121.5(3) ? C22 C21 C20 . . 120.0(4) ? C21 C22 C23 . . 120.2(4) ? C24 C23 C22 . . 120.2(4) ? C23 C24 C25 . . 120.7(4) ? C20 C25 C24 . . 119.1(4) ? C31 C30 C35 . . 119.8(3) ? C31 C30 P1 . . 122.0(3) ? C35 C30 P1 . . 117.9(3) ? C30 C31 C32 . . 119.7(4) ? C33 C32 C31 . . 120.3(4) ? C34 C33 C32 . . 120.2(4) ? C33 C34 C35 . . 120.5(4) ? C34 C35 C30 . . 119.5(3) ? C45 C40 C41 . . 119.4(3) ? C45 C40 P1 . . 120.1(3) ? C41 C40 P1 . . 120.4(3) ? C42 C41 C40 . . 119.5(4) ? C41 C42 C43 . . 120.2(4) ? C44 C43 C42 . . 120.6(4) ? C43 C44 C45 . . 119.6(4) ? C40 C45 C44 . . 120.5(3) ? C51 C50 C55 . . 119.7(3) ? C51 C50 P1 . . 122.0(3) ? C55 C50 P1 . . 118.4(3) ? C52 C51 C50 . . 120.1(4) ? C53 C52 C51 . . 119.8(4) ? C52 C53 C54 . . 120.7(4) ? C55 C54 C53 . . 120.1(4) ? C54 C55 C50 . . 119.6(3) ? _journal_paper_doi 10.1107/S0108270100017285