#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2012438.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012438 loop_ _publ_author_name 'Usman, Anwar' 'Chantrapromma, Suchada' 'Fun, Hoong-Kun' 'Poh, Bo-Long' 'Karalai, Chatchanok' _publ_section_title ; Hexamethylenetetraminium 2,4,6-trinitrophenolate ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o46 _journal_page_last o47 _journal_volume 58 _journal_year 2002 _chemical_formula_moiety 'C6 H13 N4 1+, C6 H2 N3 O7 1-' _chemical_formula_sum 'C12 H15 N7 O7' _chemical_formula_weight 369.31 _chemical_name_systematic ; Hexamethylenetetramine-2,4,6-trinitrophenol ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 107.0220(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.4995(2) _cell_length_b 6.63440(10) _cell_length_c 18.6203(2) _cell_measurement_reflns_used 6652 _cell_measurement_temperature 183(2) _cell_measurement_theta_max 28.33 _cell_measurement_theta_min 3.23 _cell_volume 1476.48(4) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 183(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full .975 _diffrn_measured_fraction_theta_max .975 _diffrn_measurement_device_type ; Siemens SMART CCD area detector diffractometer ; _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0690 _diffrn_reflns_av_sigmaI/netI .0961 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -24 _diffrn_reflns_number 8504 _diffrn_reflns_theta_full 28.29 _diffrn_reflns_theta_max 28.29 _diffrn_reflns_theta_min 3.23 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu .139 _exptl_absorpt_correction_T_max .9570 _exptl_absorpt_correction_T_min .9466 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.661 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 768 _exptl_crystal_size_max .40 _exptl_crystal_size_mid .40 _exptl_crystal_size_min .32 _refine_diff_density_max .425 _refine_diff_density_min -.430 _refine_ls_extinction_coef .033(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXTL _refine_ls_goodness_of_fit_ref .951 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 240 _refine_ls_number_reflns 3575 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .951 _refine_ls_R_factor_all .0689 _refine_ls_R_factor_gt .0580 _refine_ls_shift/su_max .000 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0807P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt .1474 _refine_ls_wR_factor_ref .1539 _reflns_number_gt 2697 _reflns_number_total 3575 _reflns_threshold_expression 'I > 2\s(I)' _[local]_cod_data_source_file ln1125.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M P21/c _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012438 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 .60294(10) .5516(2) .07795(8) .0320(3) Uani d . 1 O O2 .45903(14) .8527(2) .04912(12) .0550(5) Uani d . 1 O O3 .29116(13) .7894(3) .04515(12) .0615(6) Uani d . 1 O O4 .18616(10) .2220(2) .15681(8) .0312(4) Uani d . 1 O O5 .30662(12) -.0030(2) .21338(10) .0438(4) Uani d . 1 O O6 .67789(12) .0254(2) .20283(10) .0431(4) Uani d . 1 O O7 .73586(11) .2486(2) .14037(10) .0408(4) Uani d . 1 O N3 .66203(12) .1781(2) .16407(9) .0223(3) Uani d . 1 N N2 .28268(12) .1539(2) .17746(8) .0227(3) Uani d . 1 N N1 .38972(12) .7422(2) .06093(9) .0243(3) Uani d . 1 N N4 .81992(11) .61547(19) .09625(7) .0149(3) Uani d . 1 N N5 .97556(10) .7577(2) .19366(7) .0157(3) Uani d . 1 N N6 1.00739(11) .59303(19) .08449(8) .0160(3) Uani d . 1 N N7 .91067(11) .91728(19) .07003(8) .0151(3) Uani d . 1 N C1 .53481(13) .4662(2) .10504(9) .0182(3) Uani d . 1 C C2 .42297(13) .5466(2) .09739(9) .0171(3) Uani d . 1 C C3 .34367(13) .4483(2) .12158(9) .0168(3) Uani d . 1 C H3A .2733 .5054 .1143 .020 Uiso calc R 1 H C4 .36892(13) .2631(2) .15695(9) .0170(3) Uani d . 1 C C5 .47419(13) .1785(2) .17098(9) .0175(3) Uani d . 1 C H5A .4908 .0567 .1966 .021 Uiso calc R 1 H C6 .55404(13) .2770(2) .14654(9) .0176(3) Uani d . 1 C C7 .86933(13) .6544(2) .17982(9) .0167(3) Uani d . 1 C H7A .8181 .7361 .1978 .020 Uiso calc R 1 H H7B .8802 .5274 .2068 .020 Uiso calc R 1 H C8 .90167(14) .4883(2) .06953(9) .0174(3) Uani d . 1 C H8A .9127 .3597 .0954 .021 Uiso calc R 1 H H8B .8717 .4629 .0161 .021 Uiso calc R 1 H C9 .80422(13) .8160(2) .05523(9) .0162(3) Uani d . 1 C H9A .7730 .7938 .0017 .019 Uiso calc R 1 H H9B .7524 .8994 .0720 .019 Uiso calc R 1 H C10 1.05185(13) .6316(2) .16567(9) .0181(3) Uani d . 1 C H10A 1.1237 .6986 .1758 .022 Uiso calc R 1 H H10B 1.0635 .5042 .1924 .022 Uiso calc R 1 H C11 .98830(13) .7876(2) .04477(9) .0173(3) Uani d . 1 C H11A .9580 .7635 -.0087 .021 Uiso calc R 1 H H11B 1.0593 .8568 .0532 .021 Uiso calc R 1 H C12 .95718(13) .9492(2) .15161(9) .0169(3) Uani d . 1 C H12A .9062 1.0326 .1691 .020 Uiso calc R 1 H H12B 1.0277 1.0207 .1615 .020 Uiso calc R 1 H H1N4 .751(2) .550(3) .0879(14) .046(7) Uiso d . 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0130(6) .0422(8) .0414(8) -.0030(5) .0087(6) .0185(6) O2 .0472(10) .0246(8) .1038(16) -.0003(7) .0387(10) .0197(8) O3 .0211(8) .0479(10) .1066(16) .0081(7) .0046(9) .0446(10) O4 .0117(6) .0399(8) .0434(8) .0009(5) .0104(6) .0099(6) O5 .0277(8) .0465(9) .0591(10) .0008(6) .0156(7) .0337(8) O6 .0261(8) .0465(9) .0603(11) .0174(6) .0181(7) .0281(8) O7 .0222(7) .0264(7) .0838(13) .0037(5) .0310(8) .0089(7) N3 .0146(7) .0219(7) .0309(8) .0009(5) .0074(6) -.0016(6) N2 .0145(7) .0314(8) .0226(7) -.0016(6) .0062(6) .0078(6) N1 .0219(8) .0202(7) .0281(8) -.0014(6) .0032(6) .0033(6) N4 .0103(6) .0165(6) .0183(7) -.0016(5) .0048(5) .0009(5) N5 .0119(6) .0188(6) .0160(6) .0006(5) .0033(5) .0012(5) N6 .0148(7) .0172(6) .0183(7) .0019(5) .0082(5) .0020(5) N7 .0143(6) .0144(6) .0175(6) .0007(5) .0058(5) .0019(5) C1 .0115(7) .0242(8) .0181(8) -.0041(6) .0030(6) -.0002(6) C2 .0139(8) .0174(7) .0184(8) -.0014(6) .0022(6) .0011(6) C3 .0117(7) .0219(8) .0165(7) .0001(6) .0035(6) -.0013(6) C4 .0116(8) .0229(8) .0176(8) -.0023(6) .0062(6) .0021(6) C5 .0143(8) .0190(7) .0181(8) .0000(6) .0031(6) .0012(6) C6 .0099(7) .0218(8) .0204(8) .0006(6) .0033(6) -.0016(6) C7 .0158(8) .0218(8) .0145(7) -.0005(6) .0078(6) .0019(6) C8 .0188(8) .0142(7) .0208(8) .0001(6) .0083(6) -.0020(6) C9 .0118(7) .0185(7) .0166(7) .0026(5) .0016(6) .0020(6) C10 .0124(7) .0223(8) .0189(8) .0044(6) .0034(6) .0039(6) C11 .0164(8) .0193(8) .0192(8) .0014(6) .0099(6) .0031(6) C12 .0159(7) .0141(7) .0204(8) -.0018(5) .0049(6) -.0023(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O6 N3 O7 121.20(15) yes O6 N3 C6 119.06(14) ? O7 N3 C6 119.74(14) ? O5 N2 O4 122.60(14) yes O5 N2 C4 119.32(14) ? O4 N2 C4 118.07(14) ? O2 N1 O3 121.94(16) yes O2 N1 C2 120.14(15) ? O3 N1 C2 117.89(14) ? C8 N4 C9 108.82(12) ? C8 N4 C7 108.64(12) ? C9 N4 C7 108.69(12) ? C8 N4 H1N4 111.3(14) ? C9 N4 H1N4 110.2(15) ? C7 N4 H1N4 109.2(15) ? C7 N5 C10 108.83(12) ? C7 N5 C12 108.73(12) ? C10 N5 C12 108.51(12) ? C8 N6 C11 108.66(12) ? C8 N6 C10 109.30(12) ? C11 N6 C10 108.68(12) ? C9 N7 C11 108.89(12) ? C9 N7 C12 109.09(12) ? C11 N7 C12 108.35(12) ? O1 C1 C6 125.47(15) ? O1 C1 C2 122.79(15) ? C6 C1 C2 111.73(13) ? C3 C2 C1 123.88(15) ? C3 C2 N1 116.08(14) ? C1 C2 N1 120.03(14) ? C2 C3 C4 119.52(15) ? C2 C3 H3A 120.2 ? C4 C3 H3A 120.2 ? C5 C4 C3 121.41(14) ? C5 C4 N2 119.35(14) ? C3 C4 N2 119.21(14) ? C6 C5 C4 119.11(15) ? C6 C5 H5A 120.4 ? C4 C5 H5A 120.4 ? C5 C6 N3 115.37(14) ? C5 C6 C1 124.14(14) ? N3 C6 C1 120.49(14) ? N5 C7 N4 109.83(12) ? N5 C7 H7A 109.7 ? N4 C7 H7A 109.7 ? N5 C7 H7B 109.7 ? N4 C7 H7B 109.7 ? H7A C7 H7B 108.2 ? N6 C8 N4 109.58(12) ? N6 C8 H8A 109.8 ? N4 C8 H8A 109.8 ? N6 C8 H8B 109.8 ? N4 C8 H8B 109.8 ? H8A C8 H8B 108.2 ? N7 C9 N4 109.62(12) ? N7 C9 H9A 109.7 ? N4 C9 H9A 109.7 ? N7 C9 H9B 109.7 ? N4 C9 H9B 109.7 ? H9A C9 H9B 108.2 ? N6 C10 N5 111.90(12) ? N6 C10 H10A 109.2 ? N5 C10 H10A 109.2 ? N6 C10 H10B 109.2 ? N5 C10 H10B 109.2 ? H10A C10 H10B 107.9 ? N6 C11 N7 112.14(12) ? N6 C11 H11A 109.2 ? N7 C11 H11A 109.2 ? N6 C11 H11B 109.2 ? N7 C11 H11B 109.2 ? H11A C11 H11B 107.9 ? N7 C12 N5 112.13(12) ? N7 C12 H12A 109.2 ? N5 C12 H12A 109.2 ? N7 C12 H12B 109.2 ? N5 C12 H12B 109.2 ? H12A C12 H12B 107.9 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 1.2456(19) yes O2 N1 1.2037(19) yes O3 N1 1.221(2) yes O4 N2 1.2393(18) yes O5 N2 1.2258(19) yes O6 N3 1.226(2) yes O7 N3 1.2262(18) yes N3 C6 1.449(2) ? N2 C4 1.4403(19) ? N1 C2 1.467(2) ? N4 C8 1.517(2) yes N4 C9 1.5181(19) yes N4 C7 1.519(2) yes N4 H1N4 .94(3) ? N5 C7 1.4488(19) yes N5 C10 1.4737(19) yes N5 C12 1.474(2) yes N6 C8 1.446(2) yes N6 C11 1.4719(19) yes N6 C10 1.472(2) yes N7 C9 1.4431(19) yes N7 C11 1.4733(19) yes N7 C12 1.474(2) yes C1 C6 1.457(2) ? C1 C2 1.464(2) ? C2 C3 1.368(2) ? C3 C4 1.386(2) ? C3 H3A .9300 ? C4 C5 1.383(2) ? C5 C6 1.377(2) ? C5 H5A .9300 ? C7 H7A .9700 ? C7 H7B .9700 ? C8 H8A .9700 ? C8 H8B .9700 ? C9 H9A .9700 ? C9 H9B .9700 ? C10 H10A .9700 ? C10 H10B .9700 ? C11 H11A .9700 ? C11 H11B .9700 ? C12 H12A .9700 ? C12 H12B .9700 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N4 H14N O1 1_555 .94(2) 1.81(3) 2.666(2) 152(2) yes N4 H14N O7 1_555 .94(2) 2.26(2) 2.865(2) 122(2) yes C12 H12A O7 1_565 .97 2.49 3.362(2) 149 yes C12 H12B O4 1_665 .97 2.41 3.364(2) 167 yes C5 H5A Cg 2_645 .93 3.30 4.07 142 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O1 C1 C2 C3 174.80(16) C6 C1 C2 C3 -4.4(2) O1 C1 C2 N1 -4.2(3) C6 C1 C2 N1 176.62(14) O2 N1 C2 C3 167.90(18) O3 N1 C2 C3 -10.3(2) O2 N1 C2 C1 -13.0(3) O3 N1 C2 C1 168.81(18) C1 C2 C3 C4 1.3(3) N1 C2 C3 C4 -179.67(14) C2 C3 C4 C5 2.5(2) C2 C3 C4 N2 -175.61(15) O5 N2 C4 C5 6.9(2) O4 N2 C4 C5 -172.03(15) O5 N2 C4 C3 -174.93(17) O4 N2 C4 C3 6.1(2) C3 C4 C5 C6 -2.6(3) N2 C4 C5 C6 175.49(14) C4 C5 C6 N3 179.64(14) C4 C5 C6 C1 -1.0(3) O6 N3 C6 C5 -4.9(2) O7 N3 C6 C5 175.43(17) O6 N3 C6 C1 175.74(16) O7 N3 C6 C1 -3.9(3) O1 C1 C6 C5 -174.91(17) C2 C1 C6 C5 4.3(2) O1 C1 C6 N3 4.4(3) C2 C1 C6 N3 -176.45(14) C10 N5 C7 N4 -59.11(16) C12 N5 C7 N4 58.91(15) C8 N4 C7 N5 59.14(15) C9 N4 C7 N5 -59.12(15) C11 N6 C8 N4 -59.31(16) C10 N6 C8 N4 59.14(16) C9 N4 C8 N6 59.25(16) C7 N4 C8 N6 -58.93(15) C11 N7 C9 N4 58.91(16) C12 N7 C9 N4 -59.16(15) C8 N4 C9 N7 -59.03(16) C7 N4 C9 N7 59.12(15) C8 N6 C10 N5 -60.44(16) C11 N6 C10 N5 57.99(16) C7 N5 C10 N6 60.22(16) C12 N5 C10 N6 -57.94(16) C8 N6 C11 N7 60.76(16) C10 N6 C11 N7 -58.08(16) C9 N7 C11 N6 -60.66(17) C12 N7 C11 N6 57.88(16) C9 N7 C12 N5 60.49(16) C11 N7 C12 N5 -57.92(16) C7 N5 C12 N7 -60.16(16) C10 N5 C12 N7 58.06(16)