#------------------------------------------------------------------------------ #$Date: 2016-02-20 00:18:51 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176760 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/32/2013252.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2013252 loop_ _publ_author_name 'Fonari, Marina S.' 'Simonov, Yurii A.' 'Chumakov, Yurii M.' 'Bocelli, Gabriele' 'Ganin, Eduard V.' 'Gelmboldt, Vladimir O.' _publ_section_title ; The monoclinic polymorph of rac-5,7,7,12,12,14-hexamethyl-1,4,8,11-tetraazoniacyclotetradecane bis(hexafluorogermanate) tetrahydrate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m168 _journal_page_last m170 _journal_paper_doi 10.1107/S0108270103005869 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac '(C16 H40 N4) [Ge F6]2, 4H2 O' _chemical_formula_moiety 'C16 H40 N4 4+, 2F6 Ge 2-, 4H2 O' _chemical_formula_sum 'C16 H48 F12 Ge2 N4 O4' _chemical_formula_weight 733.76 _chemical_melting_point 70 _chemical_name_common ; (H4-tet b) bis(hexafluorogermanate)tetrahydrate ; _chemical_name_systematic ; rac-5,7,7,12,12,14-hexamethyl- 1,4,8,11-tetraazoniacyclotetradecane bis(hexafluorogermanate) tetrahydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 96.28(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 9.5650(19) _cell_length_b 16.522(3) _cell_length_c 9.0210(18) _cell_measurement_reflns_used 24 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 16.16 _cell_measurement_theta_min 5.63 _cell_volume 1417.1(5) _computing_cell_refinement 'BELLETTI (Belletti, 1996)' _computing_data_collection 'LEHMAN (Lehman & Larsen, 1974)' _computing_data_reduction LEHMAN _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type ; Phillips PW1100 four-circle diffractometer ; _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0148 _diffrn_reflns_av_sigmaI/netI 0.0326 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 0 _diffrn_reflns_limit_k_min -23 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 4350 _diffrn_reflns_theta_full 30.01 _diffrn_reflns_theta_max 30.01 _diffrn_reflns_theta_min 3.19 _diffrn_standards_decay_% 0.1 _diffrn_standards_interval_count 100 _diffrn_standards_interval_time 0 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 2.230 _exptl_absorpt_correction_T_max 0.6640 _exptl_absorpt_correction_T_min 0.6056 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details 'North et al. (1968)' _exptl_crystal_colour white _exptl_crystal_density_diffrn 1.720 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 752 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.648 _refine_diff_density_min -0.621 _refine_ls_extinction_coef 0.0035(6) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 0.945 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 208 _refine_ls_number_reflns 4137 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 0.946 _refine_ls_R_factor_all 0.0415 _refine_ls_R_factor_gt 0.0276 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0437P)^2^+0.0000P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0673 _refine_ls_wR_factor_ref 0.0717 _reflns_number_gt 3251 _reflns_number_total 4137 _reflns_threshold_expression I>2\s(I) _cod_data_source_file dn1019.cif _cod_data_source_block I _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2013252 _cod_database_fobs_code 2013252 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 0.65202(15) 0.48758(9) 0.28844(16) 0.0170(3) Uani d . 1 . . N H1N 0.665(2) 0.4808(14) 0.377(3) 0.038(7) Uiso d . 1 . . H H2N 0.583(2) 0.5204(12) 0.273(2) 0.019(5) Uiso d . 1 . . H C2 0.61510(18) 0.40828(10) 0.21150(19) 0.0201(3) Uani d . 1 . . C H2A 0.6883 0.3692 0.2423 0.024 Uiso calc R 1 . . H H2B 0.6135 0.4159 0.1047 0.024 Uiso calc R 1 . . H C3 0.47415(18) 0.37364(10) 0.24386(18) 0.0209(3) Uani d . 1 . . C H3A 0.4769 0.3154 0.2307 0.025 Uiso calc R 1 . . H H3B 0.4630 0.3839 0.3478 0.025 Uiso calc R 1 . . H N4 0.34695(15) 0.40574(9) 0.15045(16) 0.0176(3) Uani d . 1 . . N H3N 0.272(3) 0.3778(13) 0.180(3) 0.031(6) Uiso d . 1 . . H H4N 0.339(2) 0.4523(15) 0.173(2) 0.029(6) Uiso d . 1 . . H C5 0.34726(18) 0.40030(10) -0.01641(17) 0.0174(3) Uani d . 1 . . C H5 0.4316 0.4279 -0.0431 0.021 Uiso calc R 1 . . H C51 0.3563(2) 0.31189(12) -0.0614(2) 0.0343(5) Uani d . 1 . . C H51A 0.4383 0.2877 -0.0084 0.051 Uiso calc R 1 . . H H51B 0.3624 0.3084 -0.1667 0.051 Uiso calc R 1 . . H H51C 0.2738 0.2837 -0.0376 0.051 Uiso calc R 1 . . H C6 0.21803(17) 0.44708(10) -0.08745(18) 0.0188(3) Uani d . 1 . . C H6A 0.2103 0.4961 -0.0298 0.023 Uiso calc R 1 . . H H6B 0.1356 0.4145 -0.0754 0.023 Uiso calc R 1 . . H C7 0.21032(17) 0.47177(10) -0.25352(18) 0.0185(3) Uani d . 1 . . C C71 0.09110(19) 0.53334(12) -0.2851(2) 0.0312(4) Uani d . 1 . . C H71A 0.0945 0.5563 -0.3824 0.047 Uiso calc R 1 . . H H71B 0.1017 0.5755 -0.2116 0.047 Uiso calc R 1 . . H H71C 0.0023 0.5068 -0.2811 0.047 Uiso calc R 1 . . H C72 0.1857(2) 0.40094(12) -0.3625(2) 0.0291(4) Uani d . 1 . . C H72A 0.1058 0.3702 -0.3390 0.044 Uiso calc R 1 . . H H72B 0.2674 0.3668 -0.3543 0.044 Uiso calc R 1 . . H H72C 0.1685 0.4213 -0.4624 0.044 Uiso calc R 1 . . H Ge1 0.310989(19) 0.621276(10) 0.316046(19) 0.01870(7) Uani d . 1 . . Ge F1 0.24643(18) 0.65746(9) 0.48029(16) 0.0585(4) Uani d . 1 . . F F2 0.29704(16) 0.52018(7) 0.38974(14) 0.0471(4) Uani d . 1 . . F F3 0.13940(14) 0.61257(9) 0.22150(18) 0.0503(4) Uani d . 1 . . F F4 0.38129(13) 0.57228(7) 0.15877(12) 0.0336(3) Uani d . 1 . . F F5 0.32908(15) 0.71764(7) 0.24103(17) 0.0474(4) Uani d . 1 . . F F6 0.48772(15) 0.62380(10) 0.40165(17) 0.0563(4) Uani d . 1 . . F O1W 0.12041(17) 0.31098(10) 0.20649(19) 0.0376(4) Uani d D 1 . . O H1W 0.077(2) 0.3026(15) 0.283(2) 0.044(7) Uiso d D 1 . . H H2W 0.067(2) 0.2972(16) 0.135(2) 0.046(8) Uiso d D 1 . . H O2W 0.03232(17) 0.74663(11) 0.05757(19) 0.0397(4) Uani d D 1 . . O H3W 0.068(3) 0.7104(14) 0.109(3) 0.054(9) Uiso d D 1 . . H H4W 0.098(3) 0.7706(19) 0.022(4) 0.088(12) Uiso d D 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0179(7) 0.0173(7) 0.0154(7) -0.0014(5) 0.0004(5) 0.0021(5) C2 0.0212(8) 0.0171(7) 0.0211(8) -0.0001(6) -0.0015(6) -0.0013(6) C3 0.0255(8) 0.0188(8) 0.0174(7) -0.0044(7) -0.0020(6) 0.0050(6) N4 0.0204(7) 0.0162(6) 0.0162(6) -0.0030(5) 0.0026(5) -0.0006(5) C5 0.0192(8) 0.0196(7) 0.0137(7) 0.0012(6) 0.0032(6) 0.0029(6) C51 0.0517(13) 0.0254(9) 0.0247(9) 0.0143(9) -0.0006(9) -0.0065(7) C6 0.0181(7) 0.0201(8) 0.0183(7) 0.0001(6) 0.0030(6) 0.0026(6) C7 0.0158(7) 0.0200(8) 0.0189(8) -0.0027(6) -0.0012(6) 0.0044(6) C71 0.0179(8) 0.0337(10) 0.0408(11) 0.0030(7) -0.0024(8) 0.0146(9) C72 0.0348(10) 0.0290(10) 0.0222(8) -0.0117(8) -0.0026(7) -0.0002(7) Ge1 0.02193(10) 0.01746(10) 0.01710(9) 0.00349(7) 0.00387(6) 0.00024(7) F1 0.0845(12) 0.0531(9) 0.0435(8) 0.0186(8) 0.0328(8) -0.0117(7) F2 0.0837(10) 0.0255(6) 0.0368(7) 0.0096(6) 0.0277(7) 0.0138(5) F3 0.0231(6) 0.0586(9) 0.0663(10) -0.0104(6) -0.0080(6) 0.0156(7) F4 0.0524(7) 0.0281(6) 0.0237(5) -0.0062(5) 0.0192(5) -0.0048(5) F5 0.0588(9) 0.0199(6) 0.0646(9) -0.0062(6) 0.0111(7) 0.0078(6) F6 0.0339(7) 0.0848(12) 0.0458(8) 0.0079(7) -0.0159(6) -0.0109(8) O1W 0.0339(8) 0.0413(9) 0.0385(9) -0.0119(7) 0.0078(7) 0.0017(7) O2W 0.0311(8) 0.0450(10) 0.0423(9) -0.0011(7) 0.0008(7) 0.0122(8) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ge Ge 0.1547 1.8001 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C2 N1 C7 . 3_665 116.57(13) no C2 N1 H1N . . 109.9(17) no C7 N1 H1N 3_665 . 102.6(16) no C2 N1 H2N . . 109.9(13) no C7 N1 H2N 3_665 . 110.7(13) no H1N N1 H2N . . 106(2) no N1 C2 C3 . . 113.99(14) no N1 C2 H2A . . 108.8 no C3 C2 H2A . . 108.8 no N1 C2 H2B . . 108.8 no C3 C2 H2B . . 108.8 no H2A C2 H2B . . 107.7 no N4 C3 C2 . . 116.15(13) no N4 C3 H3A . . 108.2 no C2 C3 H3A . . 108.2 no N4 C3 H3B . . 108.2 no C2 C3 H3B . . 108.2 no H3A C3 H3B . . 107.4 no C3 N4 C5 . . 116.73(13) no C3 N4 H3N . . 105.7(14) no C5 N4 H3N . . 110.3(15) no C3 N4 H4N . . 107.0(15) no C5 N4 H4N . . 108.7(15) no H3N N4 H4N . . 108(2) no N4 C5 C51 . . 109.27(13) no N4 C5 C6 . . 107.27(13) no C51 C5 C6 . . 115.99(15) no N4 C5 H5 . . 108.0 no C51 C5 H5 . . 108.0 no C6 C5 H5 . . 108.0 no C5 C51 H51A . . 109.5 no C5 C51 H51B . . 109.5 no H51A C51 H51B . . 109.5 no C5 C51 H51C . . 109.5 no H51A C51 H51C . . 109.5 no H51B C51 H51C . . 109.5 no C5 C6 C7 . . 119.17(14) no C5 C6 H6A . . 107.5 no C7 C6 H6A . . 107.5 no C5 C6 H6B . . 107.5 no C7 C6 H6B . . 107.5 no H6A C6 H6B . . 107.0 no C72 C7 C71 . . 109.24(15) no C72 C7 N1 . 3_665 106.08(14) no C71 C7 N1 . 3_665 107.94(14) no C72 C7 C6 . . 114.09(14) no C71 C7 C6 . . 108.12(15) no N1 C7 C6 3_665 . 111.20(13) no C7 C71 H71A . . 109.5 no C7 C71 H71B . . 109.5 no H71A C71 H71B . . 109.5 no C7 C71 H71C . . 109.5 no H71A C71 H71C . . 109.5 no H71B C71 H71C . . 109.5 no C7 C72 H72A . . 109.5 no C7 C72 H72B . . 109.5 no H72A C72 H72B . . 109.5 no C7 C72 H72C . . 109.5 no H72A C72 H72C . . 109.5 no H72B C72 H72C . . 109.5 no F5 Ge1 F1 . . 94.30(7) yes F5 Ge1 F3 . . 90.76(7) yes F1 Ge1 F3 . . 92.34(8) yes F5 Ge1 F6 . . 90.98(7) yes F1 Ge1 F6 . . 91.75(8) yes F3 Ge1 F6 . . 175.42(7) yes F5 Ge1 F2 . . 177.94(6) yes F1 Ge1 F2 . . 87.58(7) yes F3 Ge1 F2 . . 90.02(7) yes F6 Ge1 F2 . . 88.10(7) yes F5 Ge1 F4 . . 92.44(6) yes F1 Ge1 F4 . . 173.00(6) yes F3 Ge1 F4 . . 89.45(7) yes F6 Ge1 F4 . . 86.24(7) yes F2 Ge1 F4 . . 85.66(6) yes H1W O1W H2W . . 106(2) no H3W O2W H4W . . 107(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.506(2) no N1 C7 3_665 1.541(2) no N1 H1N . 0.81(2) no N1 H2N . 0.85(2) no C2 C3 . 1.522(2) no C2 H2A . 0.9700 no C2 H2B . 0.9700 no C3 N4 . 1.499(2) no C3 H3A . 0.9700 no C3 H3B . 0.9700 no N4 C5 . 1.508(2) no N4 H3N . 0.92(2) no N4 H4N . 0.80(2) no C5 C51 . 1.521(2) no C5 C6 . 1.537(2) no C5 H5 . 0.9800 no C51 H51A . 0.9600 no C51 H51B . 0.9600 no C51 H51C . 0.9600 no C6 C7 . 1.547(2) no C6 H6A . 0.9700 no C6 H6B . 0.9700 no C7 C72 . 1.530(2) no C7 C71 . 1.531(2) no C7 N1 3_665 1.541(2) no C71 H71A . 0.9600 no C71 H71B . 0.9600 no C71 H71C . 0.9600 no C72 H72A . 0.9600 no C72 H72B . 0.9600 no C72 H72C . 0.9600 no Ge1 F5 . 1.7459(12) yes Ge1 F1 . 1.7703(13) yes Ge1 F3 . 1.7708(14) yes Ge1 F6 . 1.7805(15) yes Ge1 F2 . 1.8081(12) yes Ge1 F4 . 1.8246(11) yes O1W H1W . 0.854(16) no O1W H2W . 0.814(16) no O2W H3W . 0.811(17) no O2W H4W . 0.835(18) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H2N F4 . 0.85(2) 2.26(2) 3.061(2) 157.2(18) yes N1 H2N F6 . 0.85(2) 2.31(2) 2.988(2) 137.0(17) yes N1 H1N F2 3_666 0.81(2) 2.09(2) 2.894(2) 172(2) yes N4 H3N O1W . 0.92(2) 1.86(2) 2.764(2) 169(2) yes N4 H4N F4 . 0.80(2) 2.03(2) 2.771(2) 154(2) yes N4 H4N F2 . 0.80(2) 2.33(2) 2.948(2) 135(2) yes O1W H1W O2W 2_545 0.854(16) 2.086(18) 2.911(2) 162(2) yes O1W H2W O2W 3_565 0.814(16) 2.017(17) 2.820(3) 169(3) yes O2W H3W F3 . 0.811(17) 1.988(17) 2.795(2) 173(3) yes O2W H4W F1 4_575 0.835(18) 1.921(19) 2.739(2) 166(3) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag N1 C2 C3 N4 . . . 83.49(18) yes C2 C3 N4 C5 . . . 54.5(2) yes C3 N4 C5 C6 . . . -172.17(13) yes N4 C5 C6 C7 . . . 163.92(14) yes C5 C6 C7 N1 . . 3_665 -48.63(19) yes C6 C7 N1 C2 . 3_665 3_665 -64.22(18) yes C7 N1 C2 C3 3_665 3_665 3_665 176.76(13) yes