#------------------------------------------------------------------------------ #$Date: 2016-02-20 00:18:51 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176760 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/33/2013325.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2013325 loop_ _publ_author_name 'Lo Presti, Leonardo' 'Soave, Raffaella' 'Destro, Riccardo' _publ_section_title ; The fungal metabolite austdiol ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o199 _journal_page_last o201 _journal_paper_doi 10.1107/S0108270103005031 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac 'C12 H12 O5' _chemical_formula_moiety 'C12 H12 O5' _chemical_formula_sum 'C12 H12 O5' _chemical_formula_weight 236.22 _chemical_name_common austdiol _chemical_name_systematic ; (7R,8S)-7,8-dihydroxy-3,7-dimethyl-6-oxo-7,8-dihydro- 6H-isochromene-5-carbaldehyde ; _space_group_IT_number 18 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2 2ab' _symmetry_space_group_name_H-M 'P 21 21 2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.4480(10) _cell_length_b 19.9380(10) _cell_length_c 6.4280(10) _cell_measurement_reflns_used 60 _cell_measurement_temperature 290(2) _cell_measurement_theta_max 12.39 _cell_measurement_theta_min 2.05 _cell_volume 1082.7(2) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1991)' _computing_data_reduction XSCANS _computing_molecular_graphics 'ORTEPIII (Burnett & Johnson, 1996)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 290(2) _diffrn_measured_fraction_theta_full .999 _diffrn_measured_fraction_theta_max .999 _diffrn_measurement_device_type 'Siemens P4' _diffrn_measurement_method 2\q/\w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0193 _diffrn_reflns_av_sigmaI/netI 0.0125 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 25 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 8 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 6711 _diffrn_reflns_theta_full 27.54 _diffrn_reflns_theta_max 27.54 _diffrn_reflns_theta_min 2.04 _diffrn_standards_decay_% none _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.114 _exptl_absorpt_correction_type none _exptl_crystal_colour 'pale orange' _exptl_crystal_density_diffrn 1.449 _exptl_crystal_density_meas 1.451 _exptl_crystal_density_method 'flotation in CCl~4~/benzene solution' _exptl_crystal_description prism _exptl_crystal_F_000 496 _exptl_crystal_size_max 0.5 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.23 _refine_diff_density_max .198 _refine_diff_density_min -.210 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.088 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 202 _refine_ls_number_reflns 1470 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.088 _refine_ls_R_factor_all 0.0431 _refine_ls_R_factor_gt 0.0356 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0660P)^2^+0.0091P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0962 _refine_ls_wR_factor_ref 0.1021 _reflns_number_gt 1269 _reflns_number_total 1470 _reflns_threshold_expression I>2\s(I) _cod_data_source_file na1600.cif _cod_data_source_block I _cod_database_code 2013325 _cod_database_fobs_code 2013325 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z' '-x+1/2, y+1/2, -z' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 0.63584(16) 0.24079(7) 0.2545(3) 0.0471(4) Uani d . 1 . . O O2 0.03004(16) 0.18916(7) 0.2257(3) 0.0420(4) Uani d . 1 . . O O3 0.4960(2) 0.43060(8) 0.3096(5) 0.0858(8) Uani d . 1 . . O O4 0.21085(19) 0.48240(7) 0.2953(4) 0.0563(5) Uani d . 1 . . O O5 -0.05386(16) 0.38911(8) 0.2661(4) 0.0580(5) Uani d . 1 . . O C1 0.0107(2) 0.25620(10) 0.2526(3) 0.0387(4) Uani d . 1 . . C C3 0.1789(2) 0.16363(9) 0.2255(4) 0.0396(5) Uani d . 1 . . C C4 0.3066(2) 0.20359(9) 0.2405(4) 0.0378(4) Uani d . 1 . . C C4A 0.2913(2) 0.27448(9) 0.2595(3) 0.0324(4) Uani d . 1 . . C C5 0.4200(2) 0.31856(9) 0.2679(3) 0.0367(5) Uani d . 1 . . C C6 0.3927(2) 0.38942(10) 0.2736(4) 0.0469(5) Uani d . 1 . . C C7 0.2269(2) 0.41612(10) 0.2154(4) 0.0417(5) Uani d . 1 . . C C8 0.1033(2) 0.37207(10) 0.3222(4) 0.0407(5) Uani d . 1 . . C C8A 0.1314(2) 0.29917(9) 0.2728(3) 0.0334(4) Uani d . 1 . . C C9 0.1811(4) 0.08944(11) 0.2036(6) 0.0556(6) Uani d . 1 . . C C10 0.5850(2) 0.29765(11) 0.2647(4) 0.0403(5) Uani d . 1 . . C C11 0.2096(3) 0.41641(14) -0.0188(5) 0.0557(6) Uani d . 1 . . C H1 -0.095(3) 0.2686(12) 0.240(4) 0.052(7) Uiso d . 1 . . H H4 0.413(2) 0.1814(10) 0.227(4) 0.036(6) Uiso d . 1 . . H H8 0.115(2) 0.3780(10) 0.482(4) 0.038(5) Uiso d . 1 . . H H9A 0.137(5) 0.079(2) 0.063(8) 0.123(16) Uiso d . 1 . . H H9B 0.282(4) 0.0718(15) 0.200(5) 0.074(9) Uiso d . 1 . . H H9C 0.123(4) 0.0691(15) 0.302(5) 0.072(9) Uiso d . 1 . . H H10 0.661(3) 0.3347(13) 0.259(4) 0.055(7) Uiso d . 1 . . H H11A 0.107(4) 0.4372(14) -0.053(5) 0.061(8) Uiso d . 1 . . H H11B 0.207(3) 0.3751(14) -0.071(4) 0.059(8) Uiso d . 1 . . H H11C 0.292(4) 0.4403(15) -0.076(5) 0.073(10) Uiso d . 1 . . H H04 0.309(4) 0.4977(16) 0.303(5) 0.068(8) Uiso d . 1 . . H H05 -0.074(4) 0.4323(16) 0.287(6) 0.080(10) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0308(7) 0.0453(8) 0.0652(10) 0.0076(6) -0.0014(8) 0.0030(8) O2 0.0328(7) 0.0330(7) 0.0602(9) -0.0033(5) -0.0006(7) -0.0014(7) O3 0.0429(9) 0.0382(9) 0.176(2) -0.0082(7) -0.0270(16) -0.0076(12) O4 0.0412(8) 0.0290(7) 0.0987(14) 0.0018(6) -0.0049(9) -0.0079(8) O5 0.0302(7) 0.0361(8) 0.1077(15) 0.0060(6) -0.0020(10) -0.0039(11) C1 0.0287(9) 0.0353(9) 0.0521(12) 0.0021(7) 0.0000(11) 0.0039(10) C3 0.0356(9) 0.0344(9) 0.0487(12) 0.0023(7) 0.0003(10) 0.0010(9) C4 0.0310(9) 0.0326(8) 0.0497(11) 0.0040(7) -0.0022(10) -0.0002(9) C4A 0.0291(8) 0.0325(8) 0.0355(9) 0.0010(7) -0.0007(8) 0.0022(8) C5 0.0266(8) 0.0353(9) 0.0482(12) 0.0009(7) -0.0038(9) 0.0025(9) C6 0.0309(9) 0.0347(10) 0.0752(16) -0.0031(8) -0.0034(11) 0.0012(11) C7 0.0321(9) 0.0291(8) 0.0639(14) 0.0029(7) -0.0021(10) 0.0006(9) C8 0.0310(9) 0.0334(9) 0.0577(13) 0.0018(8) 0.0024(9) -0.0020(10) C8A 0.0291(8) 0.0312(8) 0.0400(10) 0.0020(7) -0.0002(9) 0.0021(8) C9 0.0544(14) 0.0315(10) 0.0809(18) 0.0000(10) 0.0012(15) -0.0025(12) C10 0.0283(9) 0.0431(10) 0.0495(12) -0.0011(8) -0.0034(10) 0.0046(11) C11 0.0550(16) 0.0435(12) 0.0685(16) 0.0022(12) 0.0011(13) 0.0132(13) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C3 O2 C1 118.7(2) yes C7 O4 H04 105(2) no C8 O5 H05 112(2) no C4 C3 O2 121.4(2) no C4 C3 C9 125.9(2) no O2 C3 C9 112.7(2) no C3 C4 C4A 121.4(2) no C3 C4 H4 117.0(10) no C4A C4 H4 122.0(10) no C5 C4A C4 123.8(2) no C5 C4A C8A 120.8(2) no C4 C4A C8A 115.4(2) no C4A C5 C6 119.7(2) no C4A C5 C10 124.3(2) no C6 C5 C10 115.9(2) no O3 C6 C5 123.6(2) yes O3 C6 C7 117.6(2) yes C5 C6 C7 118.7(2) no O4 C7 C11 110.3(2) no O4 C7 C8 107.8(2) no C11 C7 C8 112.5(2) no O4 C7 C6 108.6(2) no C11 C7 C6 109.3(2) no C8 C7 C6 108.2(2) no O5 C8 C8A 109.0(2) no O5 C8 C7 112.8(2) no C8A C8 C7 110.6(2) no O5 C8 H8 108.0(10) no C8A C8 H8 108.0(10) no C7 C8 H8 108.0(10) no C1 C8A C4A 119.3(2) no C1 C8A C8 121.2(2) no C4A C8A C8 119.3(2) no C8A C1 O2 123.5(2) yes C8A C1 H1 125(2) no O2 C1 H1 111(2) no C3 C9 H9A 106(2) no C3 C9 H9B 113(2) no H9A C9 H9B 104(3) no C3 C9 H9C 112(2) no H9A C9 H9C 110(3) no H9B C9 H9C 111(3) no O1 C10 C5 127.4(2) yes O1 C10 H10 118(2) no C5 C10 H10 114(2) no C7 C11 H11A 108(2) no C7 C11 H11B 112(2) no H11A C11 H11B 107(2) no C7 C11 H11C 109(2) no H11A C11 H11C 111(2) no H11B C11 H11C 110(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O2 C3 . 1.357(2) yes O2 C1 . 1.358(2) yes O1 C10 . 1.214(3) yes O3 C6 . 1.221(3) yes O4 C7 . 1.424(2) yes O4 H04 . 0.88(3) no O5 C8 . 1.417(2) yes O5 H05 . 0.89(3) no C3 C4 . 1.345(3) no C3 C9 . 1.486(3) yes C4 C4A . 1.425(2) no C4 H4 . 1.00(2) no C4A C5 . 1.399(2) no C4A C8A . 1.441(2) no C5 C6 . 1.432(3) no C5 C10 . 1.455(2) no C6 C7 . 1.544(3) no C7 C11 . 1.512(4) yes C7 C8 . 1.528(3) no C8 C8A . 1.507(3) no C8 H8 . 1.04(2) no C8A C1 . 1.338(3) no C1 H1 . 0.93(3) no C9 H9A . 1.00(5) no C9 H9B . 0.92(3) no C9 H9C . 0.90(3) no C10 H10 . 0.98(3) no C11 H11A . 0.99(3) no C11 H11B . 0.89(3) no C11 H11C . 0.92(3) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C4 H4 O1 . 1.00(2) 2.23(2) 2.880(2) 121(2) no C10 H10 O3 . 0.98(2) 2.39(2) 2.770(2) 103.0(10) no O4 H04 O3 . 0.88(3) 2.07(3) 2.623(2) 119(2) yes O4 H04 O3 2_665 0.88(3) 2.18(3) 3.025(2) 159(2) yes O5 H05 O4 2_565 0.89(3) 2.06(3) 2.891(2) 156(3) yes C10 H10 O5 1_655 0.98(2) 2.64(2) 3.555(2) 155(2) no C1 H1 O1 1_455 0.93(2) 2.34(2) 3.182(2) 150.0(10) yes C9 H9A O3 4_455 1.00(5) 2.68(4) 3.672(4) 172(3) no C11 H11B O1 4_455 0.89(2) 2.66(2) 3.537(2) 167(2) no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C3 O2 C1 C8A 2.1(3) no C1 O2 C3 C4 -3.5(3) no C1 O2 C3 C9 177.6(2) no O2 C3 C4 C4A 0.7(3) no C9 C3 C4 C4A 179.5(3) no C3 C4 C4A C5 -177.6(2) no C3 C4 C4A C8A 3.3(3) no C4 C4A C5 C6 176.0(2) no C8A C4A C5 C6 -4.9(3) no C4 C4A C5 C10 -1.9(4) no C8A C4A C5 C10 177.2(2) yes C4A C5 C6 O3 169.6(3) yes C10 C5 C6 O3 -12.4(4) no C4A C5 C6 C7 -15.1(3) no C10 C5 C6 C7 162.9(2) no O3 C6 C7 O4 -23.3(3) no C5 C6 C7 O4 161.1(2) no O3 C6 C7 C11 97.0(3) no C5 C6 C7 C11 -78.5(3) no O3 C6 C7 C8 -140.1(3) no C5 C6 C7 C8 44.3(3) no O4 C7 C8 O5 67.3(2) no C11 C7 C8 O5 -54.5(3) no C6 C7 C8 O5 -175.4(2) no O4 C7 C8 C8A -170.3(2) no C11 C7 C8 C8A 67.8(2) no C6 C7 C8 C8A -53.0(2) no O2 C1 C8A C4A 2.0(3) no O2 C1 C8A C8 -174.2(2) no C5 C4A C8A C1 176.3(2) yes C4 C4A C8A C1 -4.5(3) yes C5 C4A C8A C8 -7.4(3) yes C4 C4A C8A C8 171.8(2) yes O5 C8 C8A C1 -21.3(3) no C7 C8 C8A C1 -145.9(2) no O5 C8 C8A C4A 162.5(2) no C7 C8 C8A C4A 37.9(3) no C4A C5 C10 O1 0.0(4) no C6 C5 C10 O1 -177.9(2) yes