#------------------------------------------------------------------------------ #$Date: 2013-12-28 15:58:47 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/33/2013378.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2013378 loop_ _publ_author_name 'Miminoshvili, Elguja B.' 'Sobolev, Alexandre N.' 'Sakvarelidze, Tamara N.' 'Miminoshvili, Ketevan E.' 'Kutelia, Elguja R.' _publ_section_title ; Diaquabis(dimethyl sulfoxide)bis(3,5-dinitrobenzoato)zinc(II) and the synthesis of the Cu, Ni and Co analogs ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m118 _journal_page_last m120 _journal_volume 59 _journal_year 2003 _chemical_formula_iupac '[Zn (C7 H3 N2 O6)2 (C2 H6 O S)2 (H2 O)2]' _chemical_formula_moiety 'C18 H22 N4 O16 S2 Zn' _chemical_formula_sum 'C18 H22 N4 O16 S2 Zn' _chemical_formula_weight 679.89 _chemical_name_common 'Diaqua bis(dimethylsulfoxide-O) bis(3,5-dinitrobenzoato-O)zinc(II)' _chemical_name_systematic ; Bisaquabis(dimethylsulfoxide)bis(3,5-dinitrobenzoato)zinc(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 91.96(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 10.479(2) _cell_length_b 5.2960(10) _cell_length_c 22.686(5) _cell_measurement_reflns_used 8192 _cell_measurement_temperature 153(2) _cell_measurement_theta_max 37.48 _cell_measurement_theta_min 16.42 _cell_volume 1258.3(4) _computing_cell_refinement 'SAINT (Bruker, 1997)' _computing_data_collection 'SMART (Bruker, 1997)' _computing_data_reduction SAINT _computing_molecular_graphics 'SHELXTL (Bruker, 1998)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 153(2) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'Bruker AXS CCD' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0306 _diffrn_reflns_av_sigmaI/netI 0.0278 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 38 _diffrn_reflns_limit_l_min -38 _diffrn_reflns_number 24698 _diffrn_reflns_theta_full 37.58 _diffrn_reflns_theta_max 37.58 _diffrn_reflns_theta_min 1.80 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.231 _exptl_absorpt_correction_T_max 0.8466 _exptl_absorpt_correction_T_min 0.7909 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS (Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.795 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 696 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.614 _refine_diff_density_min -0.309 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.006 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 195 _refine_ls_number_reflns 6588 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.006 _refine_ls_R_factor_all 0.0373 _refine_ls_R_factor_gt 0.0266 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0400P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0677 _refine_ls_wR_factor_ref 0.0707 _reflns_number_gt 5319 _reflns_number_total 6588 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ta1404.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2013378 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Zn 0.5000 0.0000 0.5000 0.01240(4) Uani d S 1 . . Zn O1 0.64347(6) 0.25613(13) 0.52442(3) 0.01705(12) Uani d D 1 . . O H11 0.6213(14) 0.407(2) 0.5176(6) 0.026 Uiso d D 1 . . H H12 0.6494(13) 0.239(3) 0.5614(5) 0.026 Uiso d D 1 . . H S1 0.22983(2) 0.22182(4) 0.551490(10) 0.01554(4) Uani d . 1 . . S O11 0.36863(6) 0.26491(13) 0.53611(3) 0.01907(12) Uani d . 1 . . O C11 0.18375(10) 0.51519(18) 0.58341(4) 0.02024(16) Uani d . 1 . . C H111 0.2231 0.5307 0.6230 0.030 Uiso calc R 1 . . H H112 0.0906 0.5208 0.5859 0.030 Uiso calc R 1 . . H H113 0.2122 0.6549 0.5588 0.030 Uiso calc R 1 . . H C12 0.13934(10) 0.2475(2) 0.48368(5) 0.02529(19) Uani d . 1 . . C H121 0.1632 0.1105 0.4572 0.038 Uiso calc R 1 . . H H122 0.1570 0.4104 0.4652 0.038 Uiso calc R 1 . . H H123 0.0481 0.2355 0.4914 0.038 Uiso calc R 1 . . H C1 0.44135(8) 0.27625(16) 0.31966(4) 0.01396(13) Uani d . 1 . . C C2 0.51852(8) 0.49026(16) 0.32320(4) 0.01410(13) Uani d . 1 . . C H2 0.5480 0.5544 0.3603 0.017 Uiso calc R 1 . . H C3 0.55142(8) 0.60771(16) 0.27100(4) 0.01471(14) Uani d . 1 . . C C4 0.51101(9) 0.52213(16) 0.21568(4) 0.01612(14) Uani d . 1 . . C H4 0.5357 0.6038 0.1806 0.019 Uiso calc R 1 . . H C5 0.43285(8) 0.31166(17) 0.21429(4) 0.01552(14) Uani d . 1 . . C C6 0.39598(8) 0.18808(17) 0.26499(4) 0.01494(14) Uani d . 1 . . C H6 0.3408 0.0459 0.2624 0.018 Uiso calc R 1 . . H N3 0.63765(7) 0.82680(14) 0.27396(3) 0.01637(13) Uani d . 1 . . N O31 0.65944(7) 0.93682(15) 0.22748(3) 0.02264(14) Uani d . 1 . . O O32 0.68274(7) 0.89065(14) 0.32211(3) 0.02226(14) Uani d . 1 . . O N5 0.39748(8) 0.20151(16) 0.15650(3) 0.01838(14) Uani d . 1 . . N O51 0.33914(9) 0.00120(14) 0.15544(4) 0.02762(16) Uani d . 1 . . O O52 0.43256(7) 0.31244(15) 0.11216(3) 0.02419(14) Uani d . 1 . . O C7 0.41593(8) 0.12382(16) 0.37472(3) 0.01449(14) Uani d . 1 . . C O71 0.47296(7) 0.19759(13) 0.42160(3) 0.01891(12) Uani d . 1 . . O O72 0.34514(7) -0.06513(14) 0.36855(3) 0.02152(13) Uani d . 1 . . O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Zn 0.01478(6) 0.01118(6) 0.01120(6) -0.00050(4) -0.00013(4) 0.00130(4) O1 0.0191(3) 0.0141(3) 0.0178(3) -0.0024(2) -0.0006(2) 0.0037(2) S1 0.01647(9) 0.01366(9) 0.01647(9) -0.00092(7) 0.00037(7) 0.00164(7) O11 0.0159(3) 0.0181(3) 0.0234(3) -0.0001(2) 0.0030(2) -0.0043(2) C11 0.0210(4) 0.0209(4) 0.0190(4) 0.0032(3) 0.0041(3) -0.0019(3) C12 0.0262(4) 0.0275(5) 0.0217(4) -0.0014(4) -0.0070(3) -0.0028(4) C1 0.0150(3) 0.0152(3) 0.0117(3) 0.0005(3) 0.0006(2) 0.0017(2) C2 0.0156(3) 0.0150(3) 0.0117(3) 0.0009(3) 0.0011(2) 0.0017(2) C3 0.0158(3) 0.0140(3) 0.0143(3) 0.0007(3) 0.0013(3) 0.0026(3) C4 0.0183(3) 0.0178(4) 0.0123(3) 0.0031(3) 0.0017(3) 0.0040(3) C5 0.0177(3) 0.0180(4) 0.0108(3) 0.0031(3) -0.0005(3) 0.0003(3) C6 0.0161(3) 0.0160(3) 0.0127(3) 0.0003(3) -0.0003(3) 0.0013(3) N3 0.0173(3) 0.0148(3) 0.0172(3) 0.0008(2) 0.0031(2) 0.0034(2) O31 0.0262(3) 0.0219(3) 0.0201(3) -0.0029(3) 0.0050(3) 0.0083(3) O32 0.0272(3) 0.0205(3) 0.0190(3) -0.0049(3) -0.0014(2) 0.0010(2) N5 0.0207(3) 0.0216(4) 0.0127(3) 0.0053(3) -0.0017(3) -0.0001(3) O51 0.0389(4) 0.0241(4) 0.0194(3) -0.0036(3) -0.0044(3) -0.0034(3) O52 0.0287(4) 0.0326(4) 0.0113(3) 0.0047(3) 0.0011(2) 0.0031(3) C7 0.0165(3) 0.0155(3) 0.0115(3) -0.0003(3) 0.0010(3) 0.0020(2) O71 0.0269(3) 0.0179(3) 0.0117(2) -0.0054(2) -0.0025(2) 0.0033(2) O72 0.0268(3) 0.0215(3) 0.0161(3) -0.0101(3) -0.0016(2) 0.0031(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Zn O1 . 2.0857(7) yes Zn O1 3_656 2.0857(7) no Zn O11 . 2.1475(8) yes Zn O11 3_656 2.1475(8) no Zn O71 . 2.0747(7) yes Zn O71 3_656 2.0747(7) no O1 H11 . 0.844(10) no O1 H12 . 0.844(10) no S1 O11 . 1.5245(8) yes S1 C11 . 1.7875(10) yes S1 C12 . 1.7846(11) yes C11 H111 . 0.9800 no C11 H112 . 0.9800 no C11 H113 . 0.9800 no C12 H121 . 0.9800 no C12 H122 . 0.9800 no C12 H123 . 0.9800 no C1 C2 . 1.3930(12) no C1 C6 . 1.3935(12) no C1 C7 . 1.5185(12) no C2 C3 . 1.3914(12) no C2 H2 . 0.9500 no C3 C4 . 1.3868(13) no C3 N3 . 1.4707(12) no C4 C5 . 1.3829(13) no C4 H4 . 0.9500 no C5 C6 . 1.3895(12) no C5 N5 . 1.4709(12) no C6 H6 . 0.9500 no N3 O32 . 1.2230(11) no N3 O31 . 1.2329(10) no N5 O51 . 1.2242(11) no N5 O52 . 1.2318(11) no C7 O72 . 1.2506(11) no C7 O71 . 1.2639(11) no loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Zn Zn 0.2839 1.4301 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Zn O11 . . 86.53(3) yes O1 Zn O11 3_656 . 93.47(3) yes O11 Zn O11 3_656 . 180.00(3) no O11 Zn O71 . . 85.81(3) yes O11 Zn O71 . 3_656 94.19(3) yes O71 Zn O71 . 3_656 180.0 no O71 Zn O1 . . 88.61(3) yes O71 Zn O1 3_656 . 91.39(3) no O71 Zn O1 . 3_656 91.39(3) yes O71 Zn O1 3_656 3_656 88.61(3) no O1 Zn O1 . 3_656 180.00(3) no O71 Zn O11 . 3_656 94.19(3) no O71 Zn O11 3_656 3_656 85.81(3) no O1 Zn O11 . 3_656 93.47(3) no O1 Zn O11 3_656 3_656 86.53(3) no Zn O1 H11 . . 112.0(10) no Zn O1 H12 . . 102.7(10) no H11 O1 H12 . . 107.2(13) no O11 S1 C11 . . 103.63(5) yes O11 S1 C12 . . 105.92(5) yes C12 S1 C11 . . 98.05(5) yes S1 O11 Zn . . 128.21(4) yes S1 C11 H111 . . 109.5 no S1 C11 H112 . . 109.5 no H111 C11 H112 . . 109.5 no S1 C11 H113 . . 109.5 no H111 C11 H113 . . 109.5 no H112 C11 H113 . . 109.5 no S1 C12 H121 . . 109.5 no S1 C12 H122 . . 109.5 no H121 C12 H122 . . 109.5 no S1 C12 H123 . . 109.5 no H121 C12 H123 . . 109.5 no H122 C12 H123 . . 109.5 no C2 C1 C6 . . 120.24(8) no C2 C1 C7 . . 120.19(8) no C6 C1 C7 . . 119.33(8) no C3 C2 C1 . . 118.35(8) no C3 C2 H2 . . 120.8 no C1 C2 H2 . . 120.8 no C4 C3 C2 . . 123.17(8) no C4 C3 N3 . . 117.86(7) no C2 C3 N3 . . 118.92(8) no C5 C4 C3 . . 116.50(8) no C5 C4 H4 . . 121.7 no C3 C4 H4 . . 121.7 no C4 C5 C6 . . 122.83(8) no C4 C5 N5 . . 118.09(8) no C6 C5 N5 . . 118.83(8) no C5 C6 C1 . . 118.86(8) no C5 C6 H6 . . 120.6 no C1 C6 H6 . . 120.6 no O32 N3 O31 . . 123.79(8) no O32 N3 C3 . . 118.48(7) no O31 N3 C3 . . 117.73(8) no O51 N5 O52 . . 124.05(8) no O51 N5 C5 . . 118.14(8) no O52 N5 C5 . . 117.75(8) no O72 C7 O71 . . 127.09(8) no O72 C7 C1 . . 116.96(8) no O71 C7 C1 . . 115.89(8) no C7 O71 Zn . . 127.75(6) yes loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1 H11 O11 3_666 0.844(10) 2.128(11) 2.8851(11) 149.1(13) O1 H12 O72 3_656 0.840(10) 1.835(11) 2.6292(11) 156.2(14) C11 H111 O31 4_576 0.98 2.49 3.2968(14) 139.5 C11 H112 O52 4_566 0.98 2.51 3.2376(14) 131.3 C11 H113 O1 3_666 0.98 2.50 3.3214(15) 140.9 C12 H121 O52 2_545 0.98 2.42 3.2389(14) 140.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 Zn O11 S1 -165.32(6) no O71 Zn O11 S1 105.82(6) no C11 S1 O11 Zn 176.49(5) no C12 S1 O11 Zn -80.86(6) no C6 C1 C2 C3 -1.75(12) no C7 C1 C2 C3 172.71(8) no C1 C2 C3 C4 0.06(13) no C1 C2 C3 N3 -177.20(7) no C2 C3 C4 C5 0.98(13) no N3 C3 C4 C5 178.27(7) no C3 C4 C5 C6 -0.37(13) no C3 C4 C5 N5 -174.57(8) no C2 C1 C6 C5 2.32(13) no C7 C1 C6 C5 -172.18(8) no C4 C5 C6 C1 -1.26(13) no N5 C5 C6 C1 172.90(8) no C2 C3 N3 O31 -175.81(8) no C2 C3 N3 O32 3.64(12) no C4 C3 N3 O31 6.78(12) no C4 C3 N3 O32 -173.77(8) no C4 C5 N5 O51 172.80(8) no C4 C5 N5 O52 -4.65(12) no C6 C5 N5 O51 -1.63(12) no C6 C5 N5 O52 -179.09(8) no C2 C1 C7 O71 -2.99(12) no C2 C1 C7 O72 179.52(8) no C6 C1 C7 O71 171.51(8) no C6 C1 C7 O72 -5.98(12) no O11 Zn O71 C7 -110.55(8) no O1 Zn O71 C7 162.83(8) no C1 C7 O71 Zn -163.89(6) no O72 C7 O71 Zn 13.30(14) no _cod_database_fobs_code 2013378 _journal_paper_doi 10.1107/S0108270103003779