#------------------------------------------------------------------------------ #$Date: 2013-12-28 15:58:47 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/38/2013831.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2013831 loop_ _publ_author_name 'Liu, Bing-Xin' 'Xu, Duan-Jun' _publ_section_title Poly[[bis(1H-benzimidazole-\kN^3^)cadmium(II)]-\m-aqua-\m-succinato-\k^2^O^1^:O^4^] _journal_issue 2 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m39 _journal_page_last m41 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Cd (C4 H4 O4) (C7 H6 N2)2 (H2 O)]' _chemical_formula_moiety 'C18 H18 Cd N4 O5' _chemical_formula_sum 'C18 H18 Cd N4 O5' _chemical_formula_weight 482.76 _chemical_name_systematic ; Poly[[bis(1H-benzimidazole-\kN^3^)cadmium(II)]-\m-aqua-\m- succinato-\k^2^O^1^:O^4^] ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90 _cell_angle_beta 97.415(19) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 13.1406(11) _cell_length_b 14.0664(12) _cell_length_c 9.7823(10) _cell_measurement_reflns_used 6608 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 26.0 _cell_measurement_theta_min 2.8 _cell_volume 1793.0(3) _computing_cell_refinement PROCESS-AUTO _computing_data_collection 'PROCESS-AUTO (Rigaku, 1998)' _computing_data_reduction 'CrystalStructure (Molecular Structure Corporation and Rigaku, 2002)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al., 1993)' _diffrn_ambient_temperature 295(2) _diffrn_detector_area_resol_mean 10.00 _diffrn_measured_fraction_theta_full 1.00 _diffrn_measured_fraction_theta_max 1.00 _diffrn_measurement_device_type 'Rigaku R-AXIS RAPID' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.015 _diffrn_reflns_av_sigmaI/netI 0.009 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min -18 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 8568 _diffrn_reflns_theta_full 27.5 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 2.13 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.258 _exptl_absorpt_correction_T_max 0.818 _exptl_absorpt_correction_T_min 0.660 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(ABSCOR; Higashi, 1995)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.788 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 968 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.64 _refine_diff_density_min -0.56 _refine_ls_extinction_coef 0.0097(6) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 1.343 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 130 _refine_ls_number_reflns 2061 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.343 _refine_ls_R_factor_all 0.025 _refine_ls_R_factor_gt 0.023 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.041P)^2^+0.6321P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.071 _refine_ls_wR_factor_ref 0.072 _reflns_number_gt 1922 _reflns_number_total 2061 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ob1153.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_database_code 2013831 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cd 0.5000 0.0000 0.5000 0.02326(11) Uani d S 1 . . Cd O1 0.41795(10) 0.13344(9) 0.54720(13) 0.0325(3) Uani d . 1 . . O O2 0.36730(12) 0.17604(12) 0.32953(15) 0.0401(4) Uani d . 1 . . O O3 0.5000 0.04827(13) 0.2500 0.0260(4) Uani d S 1 . . O N1 0.75909(13) 0.18721(12) 0.66107(16) 0.0353(4) Uani d . 1 . . N H1 0.7829 0.2301 0.7192 0.042 Uiso calc R 1 . . H N3 0.64934(11) 0.08462(11) 0.55024(15) 0.0288(3) Uani d . 1 . . N C2 0.66391(16) 0.15018(16) 0.6472(2) 0.0323(4) Uani d . 1 . . C H2 0.6137 0.1688 0.7004 0.039 Uiso calc R 1 . . H C4 0.77069(17) 0.02604(18) 0.3868(3) 0.0382(4) Uani d . 1 . . C H4 0.7252 -0.0165 0.3385 0.046 Uiso calc R 1 . . H C5 0.86832(19) 0.0381(2) 0.3535(3) 0.0522(6) Uani d . 1 . . C H5 0.8889 0.0033 0.2811 0.063 Uiso calc R 1 . . H C6 0.93754(18) 0.1017(2) 0.4260(3) 0.0540(6) Uani d . 1 . . C H6 1.0032 0.1076 0.4011 0.065 Uiso calc R 1 . . H C7 0.91057(16) 0.15537(17) 0.5330(2) 0.0451(5) Uani d . 1 . . C H7 0.9565 0.1974 0.5815 0.054 Uiso calc R 1 . . H C8 0.81125(14) 0.14387(14) 0.56519(19) 0.0317(4) Uani d . 1 . . C C9 0.74218(13) 0.07969(13) 0.49521(19) 0.0281(4) Uani d . 1 . . C C10 0.37000(13) 0.18563(12) 0.45745(19) 0.0254(4) Uani d . 1 . . C C11 0.30641(13) 0.26530(13) 0.50791(19) 0.0272(4) Uani d . 1 . . C H3 0.4528 0.0907 0.2641 0.050 Uiso d . 1 . . H H11A 0.3154 0.3222 0.4585 0.050 Uiso d . 1 . . H H11B 0.3291 0.2805 0.5953 0.050 Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd 0.01888(14) 0.02134(15) 0.02911(15) 0.00152(5) 0.00142(8) -0.00038(5) O1 0.0324(7) 0.0298(7) 0.0353(7) 0.0115(5) 0.0046(5) 0.0036(6) O2 0.0446(9) 0.0444(9) 0.0321(7) 0.0204(7) 0.0078(6) 0.0018(6) O3 0.0246(8) 0.0263(9) 0.0274(8) 0.000 0.0041(7) 0.000 N1 0.0384(9) 0.0352(9) 0.0312(8) -0.0114(7) 0.0002(7) -0.0057(7) N3 0.0252(7) 0.0302(8) 0.0302(7) -0.0037(6) 0.0010(6) -0.0015(6) C2 0.0334(10) 0.0342(10) 0.0292(9) -0.0057(8) 0.0037(8) -0.0019(8) C4 0.0329(11) 0.0364(10) 0.0450(11) -0.0023(10) 0.0035(9) -0.0085(11) C5 0.0421(13) 0.0580(16) 0.0602(15) -0.0013(12) 0.0203(11) -0.0122(13) C6 0.0326(11) 0.0623(16) 0.0696(16) -0.0079(11) 0.0162(11) -0.0034(13) C7 0.0297(10) 0.0476(13) 0.0569(13) -0.0148(9) 0.0013(9) 0.0014(11) C8 0.0303(9) 0.0320(9) 0.0314(9) -0.0056(7) -0.0018(7) 0.0025(7) C9 0.0228(8) 0.0282(9) 0.0324(8) -0.0024(7) 0.0004(7) 0.0023(7) C10 0.0194(7) 0.0233(8) 0.0343(9) 0.0023(6) 0.0062(7) 0.0014(7) C11 0.0247(8) 0.0239(9) 0.0334(8) 0.0048(7) 0.0050(7) -0.0006(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cd O1 . 2.2421(13) y Cd N3 . 2.2936(15) y Cd O3 . 2.5381(5) y O1 C10 . 1.251(2) ? O2 C10 . 1.255(2) ? O3 H3 . 0.884 ? N1 C2 . 1.345(3) ? N1 C8 . 1.374(3) ? N1 H1 . 0.8600 ? N3 C2 . 1.319(3) ? N3 C9 . 1.397(2) ? C2 H2 . 0.9300 ? C4 C5 . 1.374(3) ? C4 C9 . 1.392(3) ? C4 H4 . 0.9300 ? C5 C6 . 1.401(4) ? C5 H5 . 0.9300 ? C6 C7 . 1.374(4) ? C6 H6 . 0.9300 ? C7 C8 . 1.391(3) ? C7 H7 . 0.9300 ? C8 C9 . 1.395(3) ? C10 C11 . 1.518(2) y C11 C11 7_556 1.532(3) y C11 H11A . 0.950 ? C11 H11B . 0.894 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Cd N3 . . 86.69(5) y O1 Cd O3 . . 91.96(5) y N3 Cd O3 . . 87.78(5) y C10 O1 Cd . . 123.99(12) y Cd O3 Cd 2_655 . 148.96(8) y Cd O3 H3 2_655 . 114.7 ? Cd O3 H3 . . 86.7 ? C2 N1 C8 . . 107.38(16) ? C2 N1 H1 . . 126.3 ? C8 N1 H1 . . 126.3 ? C2 N3 C9 . . 105.00(15) ? C2 N3 Cd . . 123.89(13) ? C9 N3 Cd . . 131.08(12) ? N3 C2 N1 . . 112.94(18) ? N3 C2 H2 . . 123.5 ? N1 C2 H2 . . 123.5 ? C5 C4 C9 . . 117.7(2) ? C5 C4 H4 . . 121.2 ? C9 C4 H4 . . 121.2 ? C4 C5 C6 . . 121.6(2) ? C4 C5 H5 . . 119.2 ? C6 C5 H5 . . 119.2 ? C7 C6 C5 . . 121.5(2) ? C7 C6 H6 . . 119.3 ? C5 C6 H6 . . 119.3 ? C6 C7 C8 . . 116.8(2) ? C6 C7 H7 . . 121.6 ? C8 C7 H7 . . 121.6 ? N1 C8 C7 . . 131.95(19) ? N1 C8 C9 . . 105.77(16) ? C7 C8 C9 . . 122.28(19) ? C4 C9 C8 . . 120.17(18) ? C4 C9 N3 . . 130.90(17) ? C8 C9 N3 . . 108.89(16) ? O1 C10 O2 . . 125.72(16) ? O1 C10 C11 . . 116.99(16) ? O2 C10 C11 . . 117.25(16) ? C10 C11 C11 . 7_556 109.02(18) ? C10 C11 H11A . . 110.3 ? C11 C11 H11A 7_556 . 111.6 ? C10 C11 H11B . . 111.0 ? C11 C11 H11B 7_556 . 111.3 ? H11A C11 H11B . . 103.7 ? H3 O3 H3 . 2_655 95.1 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O2 8_556 0.86 1.96 2.799(2) 166 y O3 H3 O2 . 0.88 1.82 2.688(2) 168 y _cod_database_fobs_code 2013831 _journal_paper_doi 10.1107/S0108270103027847