#------------------------------------------------------------------------------ #$Date: 2008-01-14 00:15:36 +0200 (Mon, 14 Jan 2008) $ #$Revision: 14 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2013873.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2013873 _journal_name_full 'Acta Crystallographica, Section C' _journal_year 2004 _journal_volume 60 _journal_page_first o191 _journal_page_last o193 _publ_section_title ; 4-Amino-1-methyl-5-(2-hydroxy-4,4-dimethyl-2-oxocyclohexenylmethyl)- 2-(methylsulfanyl)pyrimidin-6(1H)-one: hydrogen-bonded chains are \p-stacked in pairs ; loop_ _publ_author_name 'Low, John N.' 'Cobo, Justo' 'Cruz, Silvia' 'Quiroga, Jairo' 'Glidewell, Christopher' _chemical_formula_moiety 'C15 H21 N3 O3 S' _chemical_formula_sum 'C15 H21 N3 O3 S' _chemical_formula_iupac 'C15 H21 N3 O3 S' _chemical_formula_weight 323.41 _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'P 21/n' _symmetry_space_group_name_Hall '-P 2yn' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x+1/2, -y+1/2, z+1/2' _cell_length_a 7.5524(2) _cell_length_b 7.1370(3) _cell_length_c 28.6208(11) _cell_angle_alpha 90.00 _cell_angle_beta 93.128(2) _cell_angle_gamma 90.00 _cell_volume 1540.40(10) _cell_formula_units_Z 4 _cell_measurement_temperature 120(2) _exptl_crystal_density_diffrn 1.394 _diffrn_ambient_temperature 120(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 0.7539(2) 0.3798(2) 0.49141(5) 0.0198(3) Uani d . 1 . . N C2 0.7498(2) 0.5505(3) 0.51029(6) 0.0194(4) Uani d . 1 . . C N3 0.6955(2) 0.6963(2) 0.48764(5) 0.0213(3) Uani d . 1 . . N C4 0.6362(2) 0.6744(2) 0.44168(6) 0.0200(4) Uani d . 1 . . C N4 0.5820(2) 0.8288(2) 0.41993(5) 0.0255(4) Uani d . 1 . . N C5 0.6339(2) 0.5062(2) 0.41944(6) 0.0194(4) Uani d . 1 . . C C6 0.7005(2) 0.3536(3) 0.44411(6) 0.0208(4) Uani d . 1 . . C O6 0.71906(19) 0.19762(17) 0.42643(4) 0.0262(3) Uani d . 1 . . O C11 0.8209(3) 0.2222(3) 0.51881(7) 0.0260(4) Uani d . 1 . . C S2 0.82976(6) 0.56773(7) 0.568820(15) 0.02358(14) Uani d . 1 . . S C21 0.7849(3) 0.8037(3) 0.57990(7) 0.0307(5) Uani d . 1 . . C C57 0.5750(2) 0.4850(3) 0.36838(6) 0.0206(4) Uani d . 1 . . C C51 0.7154(2) 0.5431(3) 0.33565(6) 0.0191(4) Uani d . 1 . . C C52 0.8609(2) 0.4398(2) 0.32941(6) 0.0198(4) Uani d . 1 . . C O52 0.88973(18) 0.27490(17) 0.34900(4) 0.0238(3) Uani d . 1 . . O C53 1.0093(2) 0.4934(3) 0.29979(6) 0.0217(4) Uani d . 1 . . C C54 1.0156(2) 0.6982(3) 0.28889(6) 0.0226(4) Uani d . 1 . . C C55 0.8268(2) 0.7601(3) 0.27475(6) 0.0229(4) Uani d . 1 . . C C56 0.6944(2) 0.7138(3) 0.31032(6) 0.0211(4) Uani d . 1 . . C O56 0.5690(2) 0.8186(2) 0.31668(6) 0.0277(4) Uani d . 1 . . O C541 1.0852(3) 0.8074(3) 0.33172(7) 0.0297(4) Uani d . 1 . . C C542 1.1342(3) 0.7320(3) 0.24834(8) 0.0325(5) Uani d . 1 . . C H11A 0.7994 0.1061 0.5011 0.039 Uiso calc R 1 . . H H11B 0.7602 0.2160 0.5482 0.039 Uiso calc R 1 . . H H11C 0.9486 0.2376 0.5257 0.039 Uiso calc R 1 . . H H21A 0.8014 0.8281 0.6136 0.046 Uiso calc R 1 . . H H21B 0.6623 0.8323 0.5693 0.046 Uiso calc R 1 . . H H21C 0.8660 0.8829 0.5630 0.046 Uiso calc R 1 . . H H4A 0.5433 0.8241 0.3904 0.031 Uiso calc R 1 . . H H4B 0.5845 0.9364 0.4350 0.031 Uiso calc R 1 . . H H57A 0.5428 0.3525 0.3622 0.025 Uiso calc R 1 . . H H57B 0.4675 0.5620 0.3617 0.025 Uiso calc R 1 . . H H52 0.8159 0.2569 0.3695 0.036 Uiso calc R 1 . . H H53A 0.9975 0.4225 0.2701 0.026 Uiso calc R 1 . . H H53B 1.1229 0.4564 0.3161 0.026 Uiso calc R 1 . . H H54A 1.0781 0.9420 0.3251 0.044 Uiso calc R 1 . . H H54B 1.2089 0.7725 0.3394 0.044 Uiso calc R 1 . . H H54C 1.0134 0.7780 0.3583 0.044 Uiso calc R 1 . . H H54G 1.1285 0.8644 0.2393 0.049 Uiso calc R 1 . . H H54H 1.0936 0.6543 0.2216 0.049 Uiso calc R 1 . . H H54I 1.2568 0.6989 0.2580 0.049 Uiso calc R 1 . . H H55A 0.8263 0.8972 0.2695 0.027 Uiso calc R 1 . . H H55B 0.7894 0.6992 0.2447 0.027 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0252(8) 0.0148(7) 0.0195(7) 0.0005(6) 0.0023(6) 0.0021(6) C2 0.0188(9) 0.0199(9) 0.0198(8) -0.0010(7) 0.0037(7) 0.0001(7) N3 0.0263(8) 0.0177(8) 0.0197(7) 0.0002(6) 0.0005(6) 0.0009(6) C4 0.0209(9) 0.0184(9) 0.0207(9) 0.0000(7) 0.0026(7) 0.0020(7) N4 0.0377(10) 0.0171(8) 0.0211(8) 0.0043(7) -0.0038(7) -0.0001(6) C5 0.0222(9) 0.0174(9) 0.0188(8) -0.0026(7) 0.0025(7) 0.0003(7) C6 0.0243(10) 0.0185(10) 0.0200(9) -0.0034(7) 0.0057(7) 0.0010(7) O6 0.0401(8) 0.0141(7) 0.0243(7) -0.0012(6) 0.0027(6) 0.0004(5) C11 0.0349(11) 0.0189(10) 0.0241(9) 0.0032(8) 0.0019(8) 0.0045(7) S2 0.0294(3) 0.0223(3) 0.0187(2) 0.0011(2) -0.00129(17) 0.00093(18) C21 0.0402(12) 0.0274(11) 0.0236(10) 0.0053(9) -0.0058(8) -0.0036(8) C57 0.0234(9) 0.0186(9) 0.0198(9) -0.0014(7) 0.0009(7) 0.0002(7) C51 0.0209(9) 0.0201(9) 0.0160(8) -0.0010(7) -0.0015(7) -0.0001(7) C52 0.0276(10) 0.0156(9) 0.0157(8) -0.0016(7) -0.0023(7) -0.0016(7) O52 0.0325(8) 0.0161(7) 0.0231(7) 0.0029(6) 0.0045(5) 0.0023(5) C53 0.0254(10) 0.0204(9) 0.0194(9) 0.0014(8) 0.0014(7) -0.0003(7) C54 0.0236(10) 0.0205(10) 0.0238(9) -0.0012(8) 0.0014(7) 0.0011(7) C55 0.0272(10) 0.0198(9) 0.0215(9) -0.0010(8) 0.0000(7) 0.0036(7) C56 0.0233(10) 0.0218(10) 0.0178(8) 0.0002(8) -0.0032(7) -0.0007(7) O56 0.0291(7) 0.0261(7) 0.0273(7) 0.0080(6) 0.0029(6) 0.0057(6) C541 0.0291(11) 0.0234(10) 0.0359(11) -0.0024(8) -0.0041(8) -0.0036(9) C542 0.0311(11) 0.0297(11) 0.0376(11) -0.0017(9) 0.0095(9) 0.0061(9) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.334(2) y C2 N3 . 1.282(2) y N3 C4 . 1.375(2) y C4 C5 . 1.359(3) y C5 C6 . 1.378(3) y C6 N1 . 1.404(2) y C2 S2 . 1.7536(18) y S2 C21 . 1.750(2) y N1 C11 . 1.447(2) y C4 N4 . 1.319(2) y C6 O6 . 1.234(2) y C51 C52 . 1.343(3) y C52 O52 . 1.317(2) y C51 C56 . 1.423(3) y C56 O56 . 1.227(2) y C11 H11A . 0.98 no C11 H11B . 0.98 no C11 H11C . 0.98 no C21 H21A . 0.98 no C21 H21B . 0.98 no C21 H21C . 0.98 no N4 H4A . 0.88 no N4 H4B . 0.88 no C5 C57 . 1.512(2) no C57 C51 . 1.511(2) no C57 H57A . 0.99 no C57 H57B . 0.99 no C52 C53 . 1.491(3) no O52 H52 . 0.84 no C53 C54 . 1.496(3) no C53 H53A . 0.99 no C53 H53B . 0.99 no C54 C541 . 1.522(3) no C54 C542 . 1.523(3) no C54 C55 . 1.526(3) no C541 H54A . 0.98 no C541 H54B . 0.98 no C541 H54C . 0.98 no C542 H54G . 0.98 no C542 H54H . 0.98 no C542 H54I . 0.98 no C55 C56 . 1.503(3) no C55 H55A . 0.99 no C55 H55B . 0.99 no