#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2014348.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2014348 loop_ _publ_author_name 'Agostinho, Magno' 'Banu, Andrei' 'Braunstein, Pierre' 'Welter, Richard' 'Morise, Xavier' _publ_section_title ; New palladium complexes with phosphino- and phosphinitopyridine ligands ; _journal_coeditor_code GG1299 _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m81 _journal_page_last m86 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac '[Pd (C H3) Cl (C26 H24 N P)]' _chemical_formula_moiety 'C27 H27 Cl N P Pd' _chemical_formula_sum 'C27 H27 Cl N P Pd' _chemical_formula_weight 538.32 _chemical_name_systematic ; chloro[2-(2,6-dimethylphenyl)-6-(diphenylphosphanomethyl)pyridine- \k^2^N,P]methylpalladium(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 99.92(5) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.5070(10) _cell_length_b 12.011(2) _cell_length_c 17.490(2) _cell_measurement_reflns_used 23164 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 30.034 _cell_measurement_theta_min 0.998 _cell_volume 2381.2(6) _computing_cell_refinement 'Denzo (Otwinowski & Minor, 1997)' _computing_data_collection 'Collect (Nonius, 1998)' _computing_data_reduction Denzo _computing_molecular_graphics 'PLATON 98 (Spek, 1998)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 173(2) _diffrn_measured_fraction_theta_full 0.982 _diffrn_measured_fraction_theta_max 0.982 _diffrn_measurement_device_type 'Nonius KappaCCD' _diffrn_measurement_method '\f or \w scans?' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0450 _diffrn_reflns_av_sigmaI/netI 0.1225 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 24 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 6838 _diffrn_reflns_theta_full 30.03 _diffrn_reflns_theta_max 30.03 _diffrn_reflns_theta_min 2.31 _exptl_absorpt_coefficient_mu 0.973 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.502 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 1096 _exptl_crystal_size_max 0.10 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.06 _refine_diff_density_max 0.722 _refine_diff_density_min -0.633 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.911 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 280 _refine_ls_number_reflns 6837 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.911 _refine_ls_R_factor_all 0.1214 _refine_ls_R_factor_gt 0.0553 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0934 _refine_ls_wR_factor_ref 0.1123 _reflns_number_gt 4250 _reflns_number_total 6837 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file gg1299.cif _[local]_cod_data_source_block V _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_depositor_comments ; The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (7 times). '_geom_angle_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (6 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2014348 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy Pd Pd1 0.11677(2) 0.25415(2) 0.110714(16) 0.02959(9) Uani d 1 Cl Cl1 0.30199(8) 0.21959(8) 0.07376(6) 0.0466(3) Uani d 1 P P1 -0.05236(7) 0.26689(7) 0.15132(5) 0.0289(2) Uani d 1 N N1 0.1737(2) 0.3362(2) 0.22921(16) 0.0304(6) Uani d 1 C C1 -0.0014(3) 0.2373(3) 0.2539(2) 0.0343(8) Uani d 1 H H1A -0.0650 0.2530 0.2840 0.041 Uiso calc 1 H H1B 0.0209 0.1578 0.2610 0.041 Uiso calc 1 C C2 0.1041(3) 0.3104(3) 0.2818(2) 0.0319(8) Uani d 1 C C3 0.1238(3) 0.3526(3) 0.3561(2) 0.0400(9) Uani d 1 H H3 0.0733 0.3322 0.3915 0.048 Uiso calc 1 C C4 0.2163(4) 0.4239(4) 0.3791(2) 0.0522(11) Uani d 1 H H4 0.2318 0.4526 0.4305 0.063 Uiso calc 1 C C5 0.2862(3) 0.4528(4) 0.3255(2) 0.0485(11) Uani d 1 H H5 0.3505 0.5025 0.3397 0.058 Uiso calc 1 C C6 0.2630(3) 0.4097(3) 0.2515(2) 0.0357(8) Uani d 1 C C7 0.3319(3) 0.4532(3) 0.1927(2) 0.0355(8) Uani d 1 C C8 0.4477(3) 0.4154(3) 0.1920(2) 0.0444(10) Uani d 1 C C9 0.5104(4) 0.4645(4) 0.1405(3) 0.0541(12) Uani d 1 H H9 0.5891 0.4412 0.1399 0.065 Uiso calc 1 C C10 0.4619(4) 0.5462(4) 0.0901(3) 0.0566(12) Uani d 1 H H10 0.5065 0.5777 0.0546 0.068 Uiso calc 1 C C11 0.3488(4) 0.5827(3) 0.0909(2) 0.0498(11) Uani d 1 H H11 0.3156 0.6390 0.0557 0.060 Uiso calc 1 C C12 0.2828(3) 0.5378(3) 0.1429(2) 0.0421(9) Uani d 1 C C13 0.5009(4) 0.3232(4) 0.2433(3) 0.0615(13) Uani d 1 H H13A 0.5806 0.3079 0.2335 0.092 Uiso calc 1 H H13B 0.4522 0.2562 0.2326 0.092 Uiso calc 1 H H13C 0.5046 0.3449 0.2977 0.092 Uiso calc 1 C C14 0.1617(4) 0.5839(4) 0.1473(3) 0.0592(13) Uani d 1 H H14A 0.1472 0.6503 0.1144 0.089 Uiso calc 1 H H14B 0.1578 0.6039 0.2011 0.089 Uiso calc 1 H H14C 0.1018 0.5275 0.1291 0.089 Uiso calc 1 C C15 -0.1158(3) 0.4055(3) 0.1463(2) 0.0319(8) Uani d 1 C C16 -0.1352(4) 0.4576(3) 0.0750(2) 0.0459(10) Uani d 1 H H16 -0.1145 0.4208 0.0312 0.055 Uiso calc 1 C C17 -0.1848(4) 0.5631(4) 0.0666(3) 0.0554(12) Uani d 1 H H17 -0.2013 0.5969 0.0168 0.066 Uiso calc 1 C C18 -0.2100(4) 0.6184(3) 0.1303(3) 0.0571(12) Uani d 1 H H18 -0.2421 0.6914 0.1249 0.068 Uiso calc 1 C C19 -0.1891(4) 0.5691(4) 0.2010(3) 0.0582(12) Uani d 1 H H19 -0.2060 0.6082 0.2450 0.070 Uiso calc 1 C C20 -0.1434(3) 0.4622(3) 0.2097(2) 0.0445(10) Uani d 1 H H20 -0.1310 0.4278 0.2593 0.053 Uiso calc 1 C C21 -0.1750(3) 0.1727(3) 0.1214(2) 0.0302(8) Uani d 1 C C22 -0.2912(3) 0.2097(3) 0.1009(2) 0.0393(9) Uani d 1 H H22 -0.3076 0.2872 0.1012 0.047 Uiso calc 1 C C23 -0.3827(3) 0.1353(4) 0.0803(3) 0.0532(11) Uani d 1 H H23 -0.4616 0.1615 0.0678 0.064 Uiso calc 1 C C24 -0.3590(4) 0.0219(4) 0.0778(2) 0.0507(11) Uani d 1 H H24 -0.4213 -0.0298 0.0632 0.061 Uiso calc 1 C C25 -0.2444(4) -0.0144(3) 0.0968(3) 0.0501(11) Uani d 1 H H25 -0.2281 -0.0918 0.0951 0.060 Uiso calc 1 C C26 -0.1528(3) 0.0590(3) 0.1182(2) 0.0402(9) Uani d 1 H H26 -0.0743 0.0320 0.1309 0.048 Uiso calc 1 C C27 0.0382(3) 0.1836(3) 0.0086(2) 0.0436(10) Uani d 1 H H27A 0.0528 0.1032 0.0104 0.065 Uiso calc 1 H H27B 0.0711 0.2163 -0.0344 0.065 Uiso calc 1 H H27C -0.0469 0.1975 0.0007 0.065 Uiso calc 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Pd1 0.02577(13) 0.02849(15) 0.03430(15) -0.00068(11) 0.00460(9) -0.00135(11) Cl1 0.0313(5) 0.0468(6) 0.0628(7) 0.0032(4) 0.0111(4) -0.0096(5) P1 0.0255(4) 0.0290(5) 0.0315(5) -0.0008(4) 0.0027(3) 0.0004(4) N1 0.0267(14) 0.0289(16) 0.0340(16) 0.0015(12) 0.0014(12) -0.0023(12) C1 0.0330(17) 0.035(2) 0.035(2) 0.0013(16) 0.0047(15) 0.0082(16) C2 0.0295(17) 0.0290(19) 0.035(2) 0.0049(14) 0.0009(15) 0.0030(15) C3 0.046(2) 0.041(2) 0.034(2) 0.0016(18) 0.0081(17) -0.0040(17) C4 0.060(3) 0.061(3) 0.034(2) -0.007(2) 0.003(2) -0.018(2) C5 0.040(2) 0.054(3) 0.050(3) -0.0154(19) 0.005(2) -0.019(2) C6 0.0314(19) 0.033(2) 0.042(2) 0.0033(15) 0.0043(16) -0.0025(16) C7 0.0322(19) 0.031(2) 0.042(2) -0.0078(15) 0.0045(16) -0.0099(16) C8 0.038(2) 0.039(2) 0.057(3) -0.0065(17) 0.0104(19) -0.0167(19) C9 0.040(2) 0.053(3) 0.075(3) -0.009(2) 0.025(2) -0.021(2) C10 0.065(3) 0.056(3) 0.056(3) -0.022(2) 0.029(2) -0.018(2) C11 0.061(3) 0.047(3) 0.040(2) -0.019(2) 0.005(2) -0.0055(19) C12 0.041(2) 0.039(2) 0.045(2) -0.0116(18) 0.0027(18) -0.0113(18) C13 0.042(2) 0.054(3) 0.086(4) 0.008(2) 0.004(2) -0.006(3) C14 0.046(3) 0.056(3) 0.071(3) 0.006(2) -0.001(2) 0.010(2) C15 0.0271(17) 0.0275(18) 0.040(2) -0.0042(14) 0.0012(15) 0.0008(15) C16 0.058(3) 0.041(2) 0.037(2) -0.001(2) 0.0011(19) -0.0003(18) C17 0.059(3) 0.041(3) 0.061(3) -0.002(2) -0.004(2) 0.018(2) C18 0.051(3) 0.030(2) 0.088(4) 0.0035(19) 0.005(3) 0.005(2) C19 0.066(3) 0.043(3) 0.068(3) 0.007(2) 0.019(3) -0.012(2) C20 0.050(2) 0.042(2) 0.043(2) 0.0051(19) 0.0115(19) -0.0023(18) C21 0.0254(17) 0.034(2) 0.0317(19) -0.0034(14) 0.0073(14) -0.0016(15) C22 0.0314(19) 0.045(2) 0.042(2) 0.0045(16) 0.0077(16) -0.0030(17) C23 0.025(2) 0.075(3) 0.059(3) -0.003(2) 0.0046(19) -0.004(2) C24 0.043(2) 0.063(3) 0.046(3) -0.025(2) 0.009(2) -0.005(2) C25 0.059(3) 0.036(2) 0.057(3) -0.012(2) 0.017(2) -0.006(2) C26 0.032(2) 0.035(2) 0.054(3) -0.0023(16) 0.0092(18) -0.0020(18) C27 0.039(2) 0.054(3) 0.039(2) -0.0073(19) 0.0093(18) -0.0139(19) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C27 Pd1 P1 91.64(11) y C27 Pd1 N1 170.52(11) y P1 Pd1 N1 78.92(8) y C27 Pd1 Cl1 88.40(11) y P1 Pd1 Cl1 173.30(4) y N1 Pd1 Cl1 101.07(8) y C15 P1 C21 105.80(15) ? C15 P1 C1 106.57(17) ? C21 P1 C1 105.33(16) ? C15 P1 Pd1 114.90(11) ? C21 P1 Pd1 123.61(11) ? C1 P1 Pd1 98.77(12) ? C2 N1 C6 117.3(3) ? C2 N1 Pd1 114.0(2) ? C6 N1 Pd1 128.6(2) ? C2 C1 P1 108.0(2) ? C2 C1 H1A 110.1 ? P1 C1 H1A 110.1 ? C2 C1 H1B 110.1 ? P1 C1 H1B 110.1 ? H1A C1 H1B 108.4 ? N1 C2 C3 122.4(3) ? N1 C2 C1 116.7(3) ? C3 C2 C1 120.8(3) ? C4 C3 C2 120.0(4) ? C4 C3 H3 120.0 ? C2 C3 H3 120.0 ? C3 C4 C5 118.1(4) ? C3 C4 H4 120.9 ? C5 C4 H4 120.9 ? C6 C5 C4 120.2(4) ? C6 C5 H5 119.9 ? C4 C5 H5 119.9 ? N1 C6 C5 121.9(3) ? N1 C6 C7 119.5(3) ? C5 C6 C7 118.4(3) ? C12 C7 C8 120.7(4) ? C12 C7 C6 118.6(3) ? C8 C7 C6 120.5(4) ? C9 C8 C7 118.0(4) ? C9 C8 C13 120.4(4) ? C7 C8 C13 121.6(4) ? C10 C9 C8 121.6(4) ? C10 C9 H9 119.2 ? C8 C9 H9 119.2 ? C9 C10 C11 120.2(4) ? C9 C10 H10 119.9 ? C11 C10 H10 119.9 ? C10 C11 C12 120.5(4) ? C10 C11 H11 119.7 ? C12 C11 H11 119.7 ? C11 C12 C7 118.9(4) ? C11 C12 C14 120.2(4) ? C7 C12 C14 120.9(4) ? C8 C13 H13A 109.5 ? C8 C13 H13B 109.5 ? H13A C13 H13B 109.5 ? C8 C13 H13C 109.5 ? H13A C13 H13C 109.5 ? H13B C13 H13C 109.5 ? C12 C14 H14A 109.5 ? C12 C14 H14B 109.5 ? H14A C14 H14B 109.5 ? C12 C14 H14C 109.5 ? H14A C14 H14C 109.5 ? H14B C14 H14C 109.5 ? C16 C15 C20 118.5(3) ? C16 C15 P1 117.5(3) ? C20 C15 P1 124.0(3) ? C15 C16 C17 120.7(4) ? C15 C16 H16 119.7 ? C17 C16 H16 119.7 ? C18 C17 C16 119.8(4) ? C18 C17 H17 120.1 ? C16 C17 H17 120.1 ? C19 C18 C17 120.1(4) ? C19 C18 H18 120.0 ? C17 C18 H18 120.0 ? C18 C19 C20 120.6(4) ? C18 C19 H19 119.7 ? C20 C19 H19 119.7 ? C15 C20 C19 120.2(4) ? C15 C20 H20 119.9 ? C19 C20 H20 119.9 ? C26 C21 C22 118.5(3) ? C26 C21 P1 119.0(3) ? C22 C21 P1 122.6(3) ? C23 C22 C21 121.0(4) ? C23 C22 H22 119.5 ? C21 C22 H22 119.5 ? C22 C23 C24 119.8(4) ? C22 C23 H23 120.1 ? C24 C23 H23 120.1 ? C25 C24 C23 119.2(4) ? C25 C24 H24 120.4 ? C23 C24 H24 120.4 ? C24 C25 C26 121.4(4) ? C24 C25 H25 119.3 ? C26 C25 H25 119.3 ? C25 C26 C21 120.2(4) ? C25 C26 H26 119.9 ? C21 C26 H26 119.9 ? Pd1 C27 H27A 109.5 ? Pd1 C27 H27B 109.5 ? H27A C27 H27B 109.5 ? Pd1 C27 H27C 109.5 ? H27A C27 H27C 109.5 ? H27B C27 H27C 109.5 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Pd1 Cl1 2.3681(14) y Pd1 P1 2.189(2) y Pd1 N1 2.286(3) y Pd1 C27 2.042(4) y P1 C15 1.814(4) ? P1 C21 1.815(3) ? P1 C1 1.823(4) y N1 C2 1.356(4) y N1 C6 1.360(4) ? C1 C2 1.510(5) y C1 H1A 0.9900 ? C1 H1B 0.9900 ? C2 C3 1.377(5) ? C3 C4 1.372(5) ? C3 H3 0.9500 ? C4 C5 1.381(5) ? C4 H4 0.9500 ? C5 C6 1.376(5) ? C5 H5 0.9500 ? C6 C7 1.497(5) ? C7 C12 1.394(5) ? C7 C8 1.411(5) ? C8 C9 1.379(6) ? C8 C13 1.489(6) ? C9 C10 1.372(7) ? C9 H9 0.9500 ? C10 C11 1.375(6) ? C10 H10 0.9500 ? C11 C12 1.390(5) ? C11 H11 0.9500 ? C12 C14 1.513(5) ? C13 H13A 0.9800 ? C13 H13B 0.9800 ? C13 H13C 0.9800 ? C14 H14A 0.9800 ? C14 H14B 0.9800 ? C14 H14C 0.9800 ? C15 C16 1.378(5) ? C15 C20 1.384(5) ? C16 C17 1.387(6) ? C16 H16 0.9500 ? C17 C18 1.370(6) ? C17 H17 0.9500 ? C18 C19 1.354(7) ? C18 H18 0.9500 ? C19 C20 1.385(6) ? C19 H19 0.9500 ? C20 H20 0.9500 ? C21 C26 1.392(5) ? C21 C22 1.396(5) ? C22 C23 1.380(5) ? C22 H22 0.9500 ? C23 C24 1.391(6) ? C23 H23 0.9500 ? C24 C25 1.375(6) ? C24 H24 0.9500 ? C25 C26 1.375(5) ? C25 H25 0.9500 ? C26 H26 0.9500 ? C27 H27A 0.9800 ? C27 H27B 0.9800 ? C27 H27C 0.9800 ?