#------------------------------------------------------------------------------ #$Date: 2016-02-20 00:18:51 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176760 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/43/2014350.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2014350 loop_ _publ_author_name 'Stahl, Kenny' 'Oddershede, Jette' 'Preikschat, Herbert' 'Fischer, Erik' 'Bennekou, Jacob S.' _publ_section_title ; Ammonium 1-hydroxy-2-(2-pyridinio)ethane-1,1-diyldiphosphonate dihydrate and potassium 1-hydroxy-2-(2-pyridinio)ethane-1,1-diyldiphosphonate dihydrate ; _journal_coeditor_code GZ1022 _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first m112 _journal_page_last m115 _journal_paper_doi 10.1107/S0108270106002782 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'N H4 + , C7 H10 N O7 P2 - , 2H2 O' _chemical_formula_moiety 'N H4 + , C7 H10 N O7 P2 - , 2H2 O' _chemical_formula_sum 'C7 H18 N2 O9 P2' _chemical_formula_weight 336.17 _chemical_name_common 'Ammonium risedronate dihydrate' _chemical_name_systematic ; Ammonium [1-hydroxy-1-phosphono-2-(pyridinium-3-yl)ethyl]phosphonate dihydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 104.2400(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.0911(6) _cell_length_b 12.2790(7) _cell_length_c 11.1598(7) _cell_measurement_reflns_used 5685 _cell_measurement_temperature 118(2) _cell_measurement_theta_max 30.8 _cell_measurement_theta_min 2.4 _cell_volume 1340.31(14) _computing_cell_refinement 'SAINT-Plus (Bruker, 1997--1999)' _computing_data_collection 'SMART (Bruker, 1997--1999)' _computing_data_reduction SAINT-Plus _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997) and ATOMS (Dowty, 2000)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 118(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 0.934 _diffrn_measurement_device_type 'Bruker SMART APEX ' _diffrn_measurement_method '\w scan, frame data integration' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0764 _diffrn_reflns_av_sigmaI/netI 0.0612 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 17561 _diffrn_reflns_theta_full 29.00 _diffrn_reflns_theta_max 30.95 _diffrn_reflns_theta_min 2.44 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.371 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.666 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 704 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.14 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.693 _refine_diff_density_min -0.329 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.096 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 214 _refine_ls_number_reflns 3965 _refine_ls_number_restraints 11 _refine_ls_restrained_S_all 1.096 _refine_ls_R_factor_all 0.0628 _refine_ls_R_factor_gt 0.0478 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.05P)^2^+0.1262P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1054 _refine_ls_wR_factor_ref 0.1113 _reflns_number_gt 3279 _reflns_number_total 3965 _reflns_threshold_expression I>2\s(I) _cod_data_source_file gz1022.cif _cod_data_source_block I _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2014350 _cod_database_fobs_code 2014350 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group P P1 0.10983(5) 0.80069(4) -0.03272(4) 0.00903(12) Uani d . 1 . . P P2 0.15912(5) 0.65558(4) 0.19432(5) 0.00888(12) Uani d . 1 . . O O1 0.24627(14) 0.85740(11) -0.01361(13) 0.0125(3) Uani d . 1 . . O O2 0.09620(15) 0.69201(11) -0.09891(13) 0.0138(3) Uani d . 1 . . O O3 -0.00384(15) 0.88178(12) -0.09911(14) 0.0149(3) Uani d D 1 . . H H3 -0.066(2) 0.860(2) -0.1571(19) 0.022 Uiso d D 1 . . O O4 0.10409(14) 0.62244(11) 0.30300(13) 0.0129(3) Uani d . 1 . . O O5 0.30956(14) 0.67993(12) 0.22075(13) 0.0157(3) Uani d . 1 . . O O6 0.11492(16) 0.56205(12) 0.09475(14) 0.0162(3) Uani d D 1 . . H H6A 0.102(3) 0.586(2) 0.0246(17) 0.024 Uiso d D 1 . . O O7 -0.07230(14) 0.75371(11) 0.09794(13) 0.0116(3) Uani d . 1 . . H H7A -0.121(2) 0.809(2) 0.070(2) 0.017 Uiso d . 1 . . O O8 0.22054(15) 0.58698(12) 0.54314(14) 0.0146(3) Uani d D 1 . . H H8A 0.242(3) 0.5230(14) 0.544(2) 0.022 Uiso d D 1 . . H H8B 0.194(3) 0.608(2) 0.4709(17) 0.022 Uiso d D 1 . . O O9 0.32192(16) 0.89092(13) 0.76991(14) 0.0186(3) Uani d D 1 . . H H9A 0.3998(19) 0.870(2) 0.777(3) 0.028 Uiso d D 1 . . H H9B 0.305(3) 0.873(2) 0.8372(19) 0.028 Uiso d D 1 . . C C1 0.07073(19) 0.77769(15) 0.11929(17) 0.0088(3) Uani d . 1 . . C C2 0.1102(2) 0.88079(15) 0.20077(18) 0.0111(4) Uani d . 1 . . H H2A 0.2084 0.8937 0.2132 0.013 Uiso calc R 1 . . H H2B 0.0620 0.9436 0.1561 0.013 Uiso calc R 1 . . C C3 0.0778(2) 0.87403(15) 0.32546(19) 0.0109(4) Uani d . 1 . . C C4 0.1822(2) 0.86570(16) 0.43179(18) 0.0131(4) Uani d . 1 . . H H4 0.2724 0.8636 0.4257 0.016 Uiso calc R 1 . . C C5 0.0269(2) 0.86081(17) 0.5578(2) 0.0208(5) Uani d . 1 . . H H5 0.0112 0.8558 0.6363 0.025 Uiso calc R 1 . . C C6 -0.0809(2) 0.86850(17) 0.4561(2) 0.0204(5) Uani d . 1 . . H H6 -0.1702 0.8680 0.4649 0.025 Uiso calc R 1 . . C C7 -0.0556(2) 0.87706(17) 0.3390(2) 0.0164(4) Uani d . 1 . . H H7 -0.1281 0.8848 0.2697 0.020 Uiso calc R 1 . . N N1 0.15506(19) 0.86055(14) 0.54411(17) 0.0169(4) Uani d . 1 . . H H1 0.2220 0.8570 0.6088 0.025 Uiso calc R 1 . . N N2 0.49123(18) 0.90088(14) 0.17132(17) 0.0130(3) Uani d D 1 . . H H2C 0.414(2) 0.874(2) 0.120(2) 0.019 Uiso d D 1 . . H H2D 0.560(2) 0.903(2) 0.134(2) 0.019 Uiso d D 1 . . H H2E 0.468(2) 0.9684(14) 0.188(2) 0.019 Uiso d D 1 . . H H2F 0.518(2) 0.8633(19) 0.2477(17) 0.019 Uiso d D 1 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 0.0100(2) 0.0088(2) 0.0078(2) -0.00154(18) 0.00133(17) 0.00021(18) P2 0.0087(2) 0.0086(2) 0.0092(2) 0.00117(17) 0.00190(18) 0.00091(18) O1 0.0113(7) 0.0144(7) 0.0119(7) -0.0032(5) 0.0029(5) -0.0001(5) O2 0.0198(7) 0.0111(7) 0.0101(7) -0.0020(5) 0.0031(6) -0.0016(5) O3 0.0157(7) 0.0116(7) 0.0136(7) -0.0001(5) -0.0039(6) 0.0020(6) O4 0.0148(7) 0.0126(7) 0.0116(7) 0.0002(5) 0.0038(6) 0.0028(5) O5 0.0090(7) 0.0214(8) 0.0156(7) 0.0020(6) 0.0012(6) 0.0047(6) O6 0.0244(8) 0.0098(7) 0.0129(7) 0.0035(6) 0.0018(6) -0.0003(6) O7 0.0059(6) 0.0111(7) 0.0172(7) 0.0007(5) 0.0018(5) 0.0018(5) O8 0.0186(7) 0.0121(7) 0.0126(7) 0.0021(6) 0.0029(6) 0.0018(6) O9 0.0134(7) 0.0289(9) 0.0151(8) 0.0009(6) 0.0065(6) 0.0001(7) C1 0.0065(8) 0.0093(8) 0.0100(9) 0.0010(6) 0.0009(7) 0.0008(7) C2 0.0117(9) 0.0100(8) 0.0124(9) -0.0011(7) 0.0043(7) 0.0002(7) C3 0.0137(9) 0.0059(8) 0.0148(10) -0.0013(7) 0.0065(8) -0.0017(7) C4 0.0177(10) 0.0094(9) 0.0139(10) 0.0000(7) 0.0073(8) -0.0009(7) C5 0.0345(13) 0.0132(10) 0.0209(11) -0.0016(9) 0.0184(10) 0.0008(8) C6 0.0202(11) 0.0138(10) 0.0339(13) -0.0034(8) 0.0193(10) -0.0059(9) C7 0.0148(10) 0.0140(10) 0.0217(11) -0.0018(8) 0.0068(8) -0.0042(8) N1 0.0249(10) 0.0131(8) 0.0131(9) 0.0014(7) 0.0052(7) 0.0016(7) N2 0.0123(8) 0.0127(8) 0.0137(9) 0.0012(7) 0.0028(7) 0.0000(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 P1 O2 116.43(8) n O1 P1 O3 108.10(8) n O2 P1 O3 111.24(8) n O1 P1 C1 109.42(8) n O2 P1 C1 107.30(8) n O3 P1 C1 103.55(8) n O5 P2 O4 116.71(8) n O5 P2 O6 112.23(9) n O4 P2 O6 105.82(8) n O5 P2 C1 106.29(8) n O4 P2 C1 110.67(8) n O6 P2 C1 104.51(8) n P1 O3 H3 119.2(18) n P2 O6 H6A 111.3(19) n C1 O7 H7A 111.4(16) n H8A O8 H8B 109(3) n H9A O9 H9B 104(3) n O7 C1 C2 111.54(15) n O7 C1 P2 105.31(12) n C2 C1 P2 111.88(13) n O7 C1 P1 108.12(12) n C2 C1 P1 109.26(12) n P2 C1 P1 110.62(9) n C3 C2 C1 114.40(15) n C3 C2 H2A 108.7 n C1 C2 H2A 108.7 n C3 C2 H2B 108.7 n C1 C2 H2B 108.7 n H2A C2 H2B 107.6 n C4 C3 C7 117.51(18) n C4 C3 C2 120.23(17) n C7 C3 C2 122.26(18) n N1 C4 C3 121.01(19) n N1 C4 H4 119.5 n C3 C4 H4 119.5 n N1 C5 C6 119.9(2) n N1 C5 H5 120.0 n C6 C5 H5 120.0 n C5 C6 C7 119.3(2) n C5 C6 H6 120.3 n C7 C6 H6 120.3 n C3 C7 C6 120.3(2) n C3 C7 H7 119.8 n C6 C7 H7 119.8 n C5 N1 C4 121.9(2) n C5 N1 H1 119.1 n C4 N1 H1 119.1 n H2C N2 H2D 111(2) n H2C N2 H2E 104(2) n H2D N2 H2E 110(2) n H2C N2 H2F 114(2) n H2D N2 H2F 110(2) n H2E N2 H2F 107(2) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P1 O1 . 1.5105(14) y P1 O2 . 1.5150(15) y P1 O3 . 1.5614(15) y P1 C1 . 1.8554(19) y P2 O5 . 1.5036(14) y P2 O4 . 1.5087(14) y P2 O6 . 1.5839(15) y P2 C1 . 1.8378(19) y O3 H3 . 0.826(16) n O6 H6A . 0.816(16) n O7 C1 . 1.434(2) y O7 H7A . 0.85(3) n O8 H8A . 0.815(16) n O8 H8B . 0.824(16) n O9 H9A . 0.810(17) n O9 H9B . 0.841(17) n C1 C2 . 1.552(3) y C2 C3 . 1.508(3) y C2 H2A . 0.9800 n C2 H2B . 0.9800 n C3 C4 . 1.383(3) y C3 C7 . 1.391(3) y C4 N1 . 1.348(3) y C4 H4 . 0.9300 n C5 N1 . 1.339(3) y C5 C6 . 1.369(3) y C5 H5 . 0.9300 n C6 C7 . 1.396(3) y C6 H6 . 0.9300 n C7 H7 . 0.9300 n N1 H1 . 0.8600 n N2 H2C . 0.906(16) n N2 H2D . 0.885(16) n N2 H2E . 0.896(16) n N2 H2F . 0.948(16) n loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O3 H3 O5 4_575 0.826(16) 1.684(17) 2.510(2) 177(3) O6 H6A O2 1 0.816(16) 1.887(19) 2.656(2) 157(3) O7 H7A O8 4_575 0.85(3) 2.01(3) 2.818(2) 158(2) N1 H1 O9 1 0.86 1.88 2.690(2) 156.6 N2 H2C O1 1 0.906(16) 1.976(17) 2.854(2) 163(2) N2 H2D O8 4_675 0.885(16) 2.124(16) 3.009(2) 178(2) N2 H2E O4 2 0.896(16) 2.036(17) 2.923(2) 171(2) N2 H2F O2 4_676 0.948(16) 1.830(17) 2.768(2) 170(2) O8 H8A O1 2_545 0.815(16) 2.069(17) 2.867(2) 166(3) O8 H8B O4 1 0.824(16) 1.880(18) 2.684(2) 165(3) O9 H9A O4 4_676 0.810(17) 2.012(19) 2.785(2) 159(3) O9 H9B O1 1_556 0.841(17) 1.908(18) 2.738(2) 169(3) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O7 C1 C2 C3 58.1(2) no P1 C1 C2 C3 177.59(13) no P2 C1 C2 C3 -59.55(19) no C1 C2 C3 C4 109.7(2) no C1 C2 C3 C7 -71.0(2) no