#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2014352.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2014352 loop_ _publ_author_name 'Din\,cer, Muharrem' '\"Ozdemir, Nam\?ik' 'Saydam, Sinan' 'Bekaro\(glu, \"Ozer' 'B\"uy\"ukg\"ung\"or, Orhan' _publ_section_title ; Hydrogen bonding in meso-4,5-diphenyl-3,6-diazaoctane-1,8-diol: the formation of one-dimensional linear chains of edge-fused rings ; _journal_coeditor_code GZ1025 _journal_issue 2 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o89 _journal_page_last o91 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'C18 H24 N2 O2' _chemical_formula_moiety 'C18 H24 N2 O2' _chemical_formula_sum 'C18 H24 N2 O2' _chemical_formula_weight 300.39 _chemical_name_systematic ; meso-4,5-diphenyl-3,6-diazaoctane-1,8-diol ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 103.035(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 17.585(2) _cell_length_b 6.8615(5) _cell_length_c 13.9453(16) _cell_measurement_reflns_used 4012 _cell_measurement_temperature 296 _cell_measurement_theta_max 27.88 _cell_measurement_theta_min 2.38 _cell_volume 1639.3(3) _computing_cell_refinement X-AREA _computing_data_collection 'X-AREA (Stoe & Cie, 2002)' _computing_data_reduction 'X-RED32 (Stoe & Cie, 2002)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999) and PLATON (Spek, 2003)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 296 _diffrn_detector_area_resol_mean 6.67 _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type 'Stoe IPDS 2' _diffrn_measurement_method \w _diffrn_radiation_monochromator 'plane graphite' _diffrn_radiation_source 'sealed X-ray tube, 12 x 0.4 mm long-fine focus' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0961 _diffrn_reflns_av_sigmaI/netI 0.0639 _diffrn_reflns_limit_h_max 21 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 4103 _diffrn_reflns_theta_full 25.99 _diffrn_reflns_theta_max 25.99 _diffrn_reflns_theta_min 3.00 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.08 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.217 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 648 _exptl_crystal_size_max 0.57 _exptl_crystal_size_mid 0.51 _exptl_crystal_size_min 0.44 _refine_diff_density_max 0.309 _refine_diff_density_min -0.198 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.089 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 148 _refine_ls_number_reflns 1597 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.089 _refine_ls_R_factor_all 0.0600 _refine_ls_R_factor_gt 0.0532 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0838P)^2^+0.3333P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1424 _refine_ls_wR_factor_ref 0.1484 _reflns_number_gt 1388 _reflns_number_total 1597 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file gz1025.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_database_code 2014352 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy _atom_site_type_symbol O1 0.77459(8) 0.18875(17) 0.83400(9) 0.0530(4) Uani d 1 O H1O 0.7709(15) 0.060(4) 0.8484(19) 0.091(8) Uiso d 1 H N1 0.72996(7) 0.28089(16) 0.62583(8) 0.0324(3) Uani d 1 N H1 0.7797(9) 0.250(2) 0.6601(11) 0.029(4) Uiso d 1 H C1 0.63681(8) 0.2576(2) 0.46694(10) 0.0361(4) Uani d 1 C C2 0.61316(9) 0.4512(2) 0.44849(11) 0.0457(4) Uani d 1 C H2 0.6531(12) 0.556(3) 0.4760(14) 0.058(5) Uiso d 1 H C3 0.53819(11) 0.4947(3) 0.39781(13) 0.0610(5) Uani d 1 C H3 0.5235(16) 0.634(4) 0.388(2) 0.098(8) Uiso d 1 H C4 0.48535(11) 0.3493(4) 0.36535(14) 0.0678(6) Uani d 1 C H4 0.4310(15) 0.380(3) 0.3305(18) 0.081(7) Uiso d 1 H C5 0.50762(12) 0.1572(4) 0.38361(16) 0.0691(6) Uani d 1 C H5 0.4727(15) 0.058(4) 0.360(2) 0.092(8) Uiso d 1 H C6 0.58280(10) 0.1115(3) 0.43360(13) 0.0523(5) Uani d 1 C H6 0.6018(13) -0.022(3) 0.4498(17) 0.074(6) Uiso d 1 H C7 0.71821(8) 0.20736(17) 0.52392(9) 0.0323(4) Uani d 1 C H7 0.7226(9) 0.057(2) 0.5238(11) 0.038(4) Uiso d 1 H C8 0.67639(9) 0.1881(2) 0.67946(11) 0.0374(4) Uani d 1 C H8A 0.6232(10) 0.235(2) 0.6483(13) 0.039(4) Uiso d 1 H H8B 0.6766(10) 0.044(2) 0.6725(11) 0.040(4) Uiso d 1 H C9 0.69785(10) 0.2420(2) 0.78736(11) 0.0443(4) Uani d 1 C H9A 0.6941(10) 0.389(3) 0.7939(13) 0.052(5) Uiso d 1 H H9B 0.6594(11) 0.177(3) 0.8185(15) 0.058(5) Uiso d 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0701(8) 0.0400(6) 0.0442(7) -0.0046(5) 0.0028(6) 0.0070(4) N1 0.0371(6) 0.0331(6) 0.0291(6) -0.0018(4) 0.0119(5) -0.0010(4) C1 0.0387(7) 0.0440(7) 0.0290(7) -0.0045(5) 0.0144(6) -0.0039(5) C2 0.0466(8) 0.0498(8) 0.0421(8) 0.0039(7) 0.0127(6) 0.0021(6) C3 0.0515(10) 0.0805(13) 0.0507(9) 0.0139(9) 0.0109(8) 0.0095(9) C4 0.0415(9) 0.1130(18) 0.0474(10) 0.0056(10) 0.0068(7) 0.0031(10) C5 0.0489(10) 0.1004(16) 0.0567(11) -0.0274(11) 0.0091(8) -0.0142(11) C6 0.0485(9) 0.0596(10) 0.0501(9) -0.0166(8) 0.0140(7) -0.0104(7) C7 0.0383(7) 0.0297(6) 0.0319(7) -0.0039(5) 0.0143(6) -0.0040(5) C8 0.0410(8) 0.0369(7) 0.0383(8) -0.0010(6) 0.0173(6) 0.0034(5) C9 0.0619(10) 0.0390(7) 0.0384(8) 0.0005(6) 0.0246(7) 0.0030(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C9 O1 H1O . . 104.1(16) ? C8 N1 C7 . . 111.95(10) yes C8 N1 H1 . . 106.2(9) ? C7 N1 H1 . . 109.3(9) ? C6 C1 C2 . . 118.18(15) ? C6 C1 C7 . . 120.45(14) yes C2 C1 C7 . . 121.35(13) yes C3 C2 C1 . . 120.64(17) ? C3 C2 H2 . . 122.5(11) ? C1 C2 H2 . . 116.8(11) ? C4 C3 C2 . . 120.7(2) ? C4 C3 H3 . . 121.3(16) ? C2 C3 H3 . . 118.0(16) ? C3 C4 C5 . . 119.41(18) ? C3 C4 H4 . . 121.0(14) ? C5 C4 H4 . . 119.6(14) ? C4 C5 C6 . . 120.49(19) ? C4 C5 H5 . . 119.9(16) ? C6 C5 H5 . . 119.6(16) ? C5 C6 C1 . . 120.59(18) ? C5 C6 H6 . . 124.2(13) ? C1 C6 H6 . . 115.2(13) ? N1 C7 C1 . . 109.75(10) yes N1 C7 C7 . 7_656 109.20(13) yes C1 C7 C7 . 7_656 112.29(13) yes N1 C7 H7 . . 110.4(9) ? C1 C7 H7 . . 106.8(8) ? C7 C7 H7 7_656 . 108.4(9) ? N1 C8 C9 . . 110.78(12) yes N1 C8 H8A . . 106.6(10) ? C9 C8 H8A . . 110.8(10) ? N1 C8 H8B . . 111.3(9) ? C9 C8 H8B . . 109.6(9) ? H8A C8 H8B . . 107.7(13) ? O1 C9 C8 . . 113.23(12) yes O1 C9 H9A . . 106.9(10) ? C8 C9 H9A . . 109.0(10) ? O1 C9 H9B . . 111.1(11) ? C8 C9 H9B . . 106.7(12) ? H9A C9 H9B . . 109.9(15) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C9 . 1.408(2) yes O1 H1O . 0.91(3) ? N1 C8 . 1.4732(16) yes N1 C7 . 1.4781(16) yes N1 H1 . 0.922(16) ? C1 C6 . 1.387(2) ? C1 C2 . 1.398(2) ? C1 C7 . 1.512(2) yes C2 C3 . 1.381(2) ? C2 H2 . 1.02(2) ? C3 C4 . 1.369(3) ? C3 H3 . 0.99(3) ? C4 C5 . 1.382(4) ? C4 H4 . 0.99(2) ? C5 C6 . 1.384(3) ? C5 H5 . 0.93(3) ? C6 H6 . 0.98(2) ? C7 C7 7_656 1.541(2) yes C7 H7 . 1.036(16) ? C8 C9 . 1.512(2) yes C8 H8A . 0.992(17) ? C8 H8B . 0.991(17) ? C9 H9A . 1.013(19) ? C9 H9B . 0.99(2) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N1 H1 O1 . 0.92(2) 2.48(2) 2.901(2) 107.8(11) O1 H1O N1 4_646 0.91(3) 1.95(3) 2.859(2) 175(2) C8 H8B O1 4_646 0.99(2) 2.60(2) 3.548(2) 161(2) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion C6 C1 C2 C3 . -0.5(2) C7 C1 C2 C3 . -178.87(13) C1 C2 C3 C4 . 0.6(3) C2 C3 C4 C5 . -0.1(3) C3 C4 C5 C6 . -0.5(3) C4 C5 C6 C1 . 0.6(3) C2 C1 C6 C5 . -0.1(2) C7 C1 C6 C5 . 178.33(15) C8 N1 C7 C1 . 62.79(14) C8 N1 C7 C7 7_656 -173.71(13) C6 C1 C7 N1 . -114.33(14) C2 C1 C7 N1 . 64.03(15) C6 C1 C7 C7 7_656 124.00(15) C2 C1 C7 C7 7_656 -57.63(18) C7 N1 C8 C9 . 171.19(11) N1 C8 C9 O1 . -58.46(16)