#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2014392.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2014392 loop_ _publ_author_name 'Vasconcelos, Thatyana R. A.' 'de Souza, Marcus V. N.' 'Wardell, Solange M. S. V.' 'Wardell, James L.' 'Low, John N.' 'Glidewell, Christopher' _publ_section_title ; Simple chains in methyl 3,5-dinitrobenzoate, isolated molecules in isopropyl 3,5-dinitrobenzoate, and a three-dimensional framework containing double and sextuple helices in benzyl 3,5-dinitrobenzoate, all at 120 K ; _journal_coeditor_code SK1889 _journal_issue 1 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o26 _journal_page_last o29 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'C14 H10 N2 O6' _chemical_formula_moiety 'C14 H10 N2 O6' _chemical_formula_sum 'C14 H10 N2 O6' _chemical_formula_weight 302.24 _chemical_name_systematic ; Benzyl 3,5-dinitrobenzoate? ; _space_group_IT_number 86 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall '-P 4bc' _symmetry_space_group_name_H-M 'P 42/n :2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 20.8531(5) _cell_length_b 20.8531(5) _cell_length_c 6.0377(2) _cell_measurement_reflns_used 3000 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.51 _cell_measurement_theta_min 3.09 _cell_volume 2625.50(12) _computing_cell_refinement 'DENZO (Otwinowski & Minor, 1997) and COLLECT' _computing_data_collection 'COLLECT (Hooft, 1999)' _computing_data_reduction 'DENZO and COLLECT' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'SHELXL97 and PRPKAPPA (Ferguson, 1999)' _computing_structure_refinement 'OSCAIL and SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'OSCAIL (McArdle, 2003) and SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 120(2) _diffrn_detector_area_resol_mean 9.091 _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type 'Nonius KappaCCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Bruker-Nonius FR91 rotating anode' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0526 _diffrn_reflns_av_sigmaI/netI 0.0392 _diffrn_reflns_limit_h_max 26 _diffrn_reflns_limit_h_min -27 _diffrn_reflns_limit_k_max 27 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min -7 _diffrn_reflns_number 18873 _diffrn_reflns_theta_full 27.51 _diffrn_reflns_theta_max 27.51 _diffrn_reflns_theta_min 3.09 _diffrn_standards_decay_% nil _exptl_absorpt_coefficient_mu 0.122 _exptl_absorpt_correction_T_max 0.995 _exptl_absorpt_correction_T_min 0.978 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 2003)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.529 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 1248 _exptl_crystal_size_max 0.22 _exptl_crystal_size_mid 0.06 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.243 _refine_diff_density_min -0.228 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.053 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 199 _refine_ls_number_reflns 3000 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.053 _refine_ls_R_factor_all 0.0581 _refine_ls_R_factor_gt 0.0432 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0355P)^2^+1.5651P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0958 _refine_ls_wR_factor_ref 0.1030 _reflns_number_gt 2413 _reflns_number_total 3000 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1889.cif _[local]_cod_data_source_block III _[local]_cod_cif_authors_sg_H-M 'P 42/n' _cod_database_code 2014392 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x+1/2, z+1/2' '-x+1/2, -y+1/2, z' 'y+1/2, -x, z+1/2' '-x, -y, -z' 'y, -x+1/2, -z+1/2' 'x+1/2, y+1/2, -z' '-y+1/2, x, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.49125(5) 0.44104(6) 0.1932(2) 0.0254(3) Uani d . 1 O O11 0.52732(5) 0.40805(5) 0.52649(18) 0.0211(3) Uani d . 1 O O31 0.74509(6) 0.32867(7) 0.5879(2) 0.0376(3) Uani d . 1 O O32 0.81810(5) 0.37069(6) 0.3788(2) 0.0284(3) Uani d . 1 O O51 0.75704(5) 0.47883(6) -0.2874(2) 0.0273(3) Uani d . 1 O O52 0.66120(6) 0.51811(6) -0.3183(2) 0.0287(3) Uani d . 1 O N3 0.76221(6) 0.36163(7) 0.4312(2) 0.0226(3) Uani d . 1 N N5 0.70199(6) 0.48641(6) -0.2208(2) 0.0206(3) Uani d . 1 N C1 0.60325(7) 0.42401(7) 0.2460(3) 0.0172(3) Uani d . 1 C C2 0.64954(7) 0.39295(7) 0.3724(3) 0.0181(3) Uani d . 1 C C3 0.71241(7) 0.39371(7) 0.2979(3) 0.0188(3) Uani d . 1 C C4 0.73094(7) 0.42425(7) 0.1063(3) 0.0185(3) Uani d . 1 C C5 0.68335(7) 0.45441(7) -0.0135(3) 0.0175(3) Uani d . 1 C C6 0.61973(7) 0.45520(7) 0.0503(3) 0.0180(3) Uani d . 1 C C11 0.53428(7) 0.42524(7) 0.3149(3) 0.0181(3) Uani d . 1 C C12 0.46199(7) 0.41048(8) 0.6171(3) 0.0209(3) Uani d . 1 C C21 0.42942(7) 0.34636(7) 0.5979(3) 0.0192(3) Uani d . 1 C C22 0.43489(8) 0.30202(8) 0.7690(3) 0.0242(4) Uani d . 1 C C23 0.40476(9) 0.24289(9) 0.7537(3) 0.0296(4) Uani d . 1 C C24 0.36916(8) 0.22777(8) 0.5671(3) 0.0293(4) Uani d . 1 C C25 0.36404(8) 0.27124(8) 0.3950(3) 0.0270(4) Uani d . 1 C C26 0.39397(8) 0.33054(8) 0.4104(3) 0.0219(4) Uani d . 1 C H2 0.6384 0.3718 0.5063 0.022 Uiso calc R 1 H H4 0.7744 0.4246 0.0588 0.022 Uiso calc R 1 H H6 0.5882 0.4764 -0.0367 0.022 Uiso calc R 1 H H12A 0.4367 0.4431 0.5359 0.025 Uiso calc R 1 H H12B 0.4638 0.4234 0.7748 0.025 Uiso calc R 1 H H22 0.4594 0.3123 0.8968 0.029 Uiso calc R 1 H H23 0.4085 0.2128 0.8711 0.036 Uiso calc R 1 H H24 0.3482 0.1874 0.5573 0.035 Uiso calc R 1 H H25 0.3401 0.2605 0.2664 0.032 Uiso calc R 1 H H26 0.3902 0.3604 0.2924 0.026 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0169(7) 0.0146(7) 0.0201(8) -0.0015(6) -0.0002(6) -0.0025(6) C2 0.0196(8) 0.0159(7) 0.0187(8) -0.0025(6) -0.0007(6) -0.0005(6) C3 0.0183(8) 0.0171(8) 0.0210(8) 0.0011(6) -0.0031(6) -0.0015(6) N3 0.0191(7) 0.0253(7) 0.0235(7) 0.0027(5) -0.0016(6) 0.0009(6) O32 0.0155(6) 0.0409(7) 0.0287(7) 0.0048(5) -0.0011(5) 0.0001(6) O31 0.0285(7) 0.0473(8) 0.0369(8) 0.0044(6) -0.0004(6) 0.0228(7) C4 0.0164(7) 0.0173(8) 0.0218(8) -0.0009(6) 0.0004(6) -0.0026(6) C5 0.0207(8) 0.0137(7) 0.0182(8) -0.0025(6) 0.0013(6) -0.0013(6) N5 0.0222(7) 0.0188(7) 0.0206(7) -0.0022(5) 0.0009(6) 0.0004(6) O52 0.0285(7) 0.0305(7) 0.0271(7) 0.0026(5) -0.0010(5) 0.0108(5) O51 0.0220(6) 0.0325(7) 0.0275(7) -0.0003(5) 0.0074(5) 0.0030(5) C6 0.0185(8) 0.0151(7) 0.0206(8) -0.0009(6) -0.0025(6) -0.0013(6) C11 0.0187(8) 0.0152(7) 0.0204(8) -0.0015(6) -0.0013(6) 0.0012(6) O1 0.0184(6) 0.0317(7) 0.0261(6) 0.0013(5) -0.0020(5) 0.0065(5) O11 0.0150(5) 0.0283(6) 0.0199(6) -0.0014(4) 0.0014(5) 0.0028(5) C12 0.0160(8) 0.0260(8) 0.0207(8) 0.0001(6) 0.0035(6) -0.0016(7) C21 0.0147(7) 0.0211(8) 0.0218(8) 0.0026(6) 0.0037(6) 0.0004(6) C22 0.0210(8) 0.0288(9) 0.0229(9) 0.0031(7) 0.0005(7) 0.0040(7) C23 0.0294(10) 0.0261(9) 0.0334(10) 0.0044(7) 0.0049(8) 0.0102(8) C24 0.0271(9) 0.0192(8) 0.0414(11) -0.0025(7) 0.0035(8) 0.0006(8) C25 0.0250(9) 0.0243(9) 0.0318(10) -0.0023(7) -0.0032(7) -0.0018(7) C26 0.0201(8) 0.0227(8) 0.0230(9) 0.0017(6) -0.0011(7) 0.0031(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 C1 C6 120.82(14) no C2 C1 C11 121.48(14) no C6 C1 C11 117.70(14) no C3 C2 C1 118.23(15) no C3 C2 H2 120.9 no C1 C2 H2 120.9 no C4 C3 C2 122.94(15) no C4 C3 N3 118.11(14) no C2 C3 N3 118.93(14) no O32 N3 O31 124.45(14) no O32 N3 C3 117.39(13) no O31 N3 C3 118.15(13) no C3 C4 C5 116.73(14) no C3 C4 H4 121.6 no C5 C4 H4 121.6 no C4 C5 C6 123.37(15) no C4 C5 N5 117.57(14) no C6 C5 N5 119.06(14) no O51 N5 O52 124.14(14) no O51 N5 C5 117.88(13) no O52 N5 C5 117.96(13) no C5 C6 C1 117.92(14) no C5 C6 H6 121.0 no C1 C6 H6 121.0 no O1 C11 O11 125.14(15) no O1 C11 C1 123.40(15) no O11 C11 C1 111.45(13) no C11 O11 C12 116.61(12) no O11 C12 C21 111.06(12) no O11 C12 H12A 109.4 no C21 C12 H12A 109.4 no O11 C12 H12B 109.4 no C21 C12 H12B 109.4 no H12A C12 H12B 108.0 no C22 C21 C26 119.35(15) no C22 C21 C12 119.77(15) no C26 C21 C12 120.88(14) no C23 C22 C21 120.28(16) no C23 C22 H22 119.9 no C21 C22 H22 119.9 no C24 C23 C22 119.95(16) no C24 C23 H23 120.0 no C22 C23 H23 120.0 no C25 C24 C23 120.20(16) no C25 C24 H24 119.9 no C23 C24 H24 119.9 no C24 C25 C26 119.93(17) no C24 C25 H25 120.0 no C26 C25 H25 120.0 no C25 C26 C21 120.29(16) no C25 C26 H26 119.9 no C21 C26 H26 119.9 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 C2 1.391(2) no C1 C6 1.392(2) no C1 C11 1.497(2) no C2 C3 1.386(2) no C2 H2 0.95 no C3 C4 1.376(2) no C3 N3 1.474(2) no N3 O32 1.2223(17) no N3 O31 1.2224(18) no C4 C5 1.380(2) no C4 H4 0.95 no C5 C6 1.381(2) no C5 N5 1.471(2) no N5 O51 1.2263(17) no N5 O52 1.2275(17) no C6 H6 0.95 no C11 O1 1.2053(19) no C11 O11 1.3350(19) no O11 C12 1.4690(18) no C12 C21 1.504(2) no C12 H12A 0.99 no C12 H12B 0.99 no C21 C22 1.391(2) no C21 C26 1.392(2) no C22 C23 1.387(2) no C22 H22 0.95 no C23 C24 1.386(3) no C23 H23 0.95 no C24 C25 1.383(3) no C24 H24 0.95 no C25 C26 1.388(2) no C25 H25 0.95 no C26 H26 0.95 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C2 H2 O32 2_645 0.95 2.52 3.460(2) 170 y C6 H6 O1 5_665 0.95 2.57 3.493(2) 164 y C12 H12A O52 5_665 0.99 2.56 3.474(2) 154 y C22 H22 O51 2_646 0.95 2.57 3.360(2) 140 y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C6 C1 C2 C3 -0.2(2) no C11 C1 C2 C3 179.86(14) no C1 C2 C3 C4 0.6(2) no C1 C2 C3 N3 179.32(13) no C4 C3 N3 O32 8.9(2) no C2 C3 N3 O32 -169.88(14) no C4 C3 N3 O31 -172.16(15) no C2 C3 N3 O31 9.1(2) no C2 C3 C4 C5 -0.6(2) no N3 C3 C4 C5 -179.32(13) no C3 C4 C5 C6 0.2(2) no C3 C4 C5 N5 -178.99(13) no C4 C5 N5 O51 7.5(2) no C6 C5 N5 O51 -171.70(14) no C4 C5 N5 O52 -173.68(14) no C6 C5 N5 O52 7.1(2) no C4 C5 C6 C1 0.2(2) no N5 C5 C6 C1 179.36(13) no C2 C1 C6 C5 -0.2(2) no C11 C1 C6 C5 179.75(13) no C2 C1 C11 O1 -166.04(15) no C6 C1 C11 O1 14.0(2) no C2 C1 C11 O11 15.2(2) no C6 C1 C11 O11 -164.72(13) no O1 C11 O11 C12 -1.7(2) no C1 C11 O11 C12 177.03(12) no C11 O11 C12 C21 93.65(16) no O11 C12 C21 C22 89.93(17) no O11 C12 C21 C26 -89.78(17) no C26 C21 C22 C23 -0.7(2) no C12 C21 C22 C23 179.61(15) no C21 C22 C23 C24 0.2(3) no C22 C23 C24 C25 0.6(3) no C23 C24 C25 C26 -0.8(3) no C24 C25 C26 C21 0.3(3) no C22 C21 C26 C25 0.4(2) no C12 C21 C26 C25 -179.86(15) no