#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2014656.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2014656 loop_ _publ_author_name 'Li, Bin' 'Lan, Yu-Ming' 'Hsu, Chi-Tung' 'Liu, Zhen-Long' 'Song, Hai-Bin' 'Wu, Chao' 'Yang, Hua-Zheng' _publ_section_title ; Three trifluoromethyl-substituted protoporphyrinogen IX oxidase inhibitors ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o122 _journal_page_last o126 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C15 H10 Cl F4 N O3' _chemical_formula_moiety 'C15 H10 Cl F4 N O3' _chemical_formula_sum 'C15 H10 Cl F4 N O3' _chemical_formula_weight 363.69 _chemical_melting_point 380.0(10) _chemical_name_systematic ; 2-[4-chloro-2-fluoro-5-(prop-2-ynyloxy)phenyl]-4-(trifluoromethyl)piperidine- 2,6-dione ; _space_group_IT_number 29 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2c -2ac' _symmetry_space_group_name_H-M 'P c a 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 22.887(9) _cell_length_b 7.250(3) _cell_length_c 9.497(4) _cell_measurement_reflns_used 908 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 21.20 _cell_measurement_theta_min 2.79 _cell_volume 1575.8(11) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction 'SAINT (Bruker, 1999)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997) in WinGX (Farrugia, 1999)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0526 _diffrn_reflns_av_sigmaI/netI 0.0430 _diffrn_reflns_limit_h_max 27 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 7730 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.78 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.300 _exptl_absorpt_correction_T_max 0.919 _exptl_absorpt_correction_T_min 0.853 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.533 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 736 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.38 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.194 _refine_diff_density_min -0.184 _refine_ls_abs_structure_details 'Flack (1983), with how many Friedel pairs' _refine_ls_abs_structure_Flack -0.05(12) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.045 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 253 _refine_ls_number_reflns 2725 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.045 _refine_ls_R_factor_all 0.0689 _refine_ls_R_factor_gt 0.0465 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.055P)^2^+0.3451P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1124 _refine_ls_wR_factor_ref 0.1236 _reflns_number_gt 2022 _reflns_number_total 2725 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file fg1802.cif _[local]_cod_data_source_block III _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1575.7(11) _cod_database_code 2014656 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' '-x+1/2, y, z+1/2' 'x+1/2, -y, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl1 0.24602(6) 0.07128(16) 0.50000(19) 0.0991(5) Uani d . 1 A . Cl F1 0.41739(11) 0.3028(3) 0.7791(3) 0.0851(8) Uani d . 1 A . F O1 0.50000(13) 0.4401(5) 0.4929(5) 0.0995(12) Uani d . 1 . . O O2 0.37221(11) 0.7646(3) 0.7528(4) 0.0722(8) Uani d . 1 . . O O3 0.26586(11) 0.4022(4) 0.3420(3) 0.0701(8) Uani d . 1 . . O N1 0.43490(12) 0.6065(4) 0.6168(3) 0.0471(7) Uani d . 1 . . N C2 0.49118(16) 0.5708(6) 0.5654(5) 0.0640(10) Uani d P 0.50 A 1 C C3 0.53841(18) 0.7023(7) 0.6051(6) 0.0942(18) Uani d P 0.50 A 1 C H3A 0.5743 0.6321 0.6148 0.113 Uiso calc PR 0.50 A 1 H H3B 0.5439 0.7863 0.5267 0.113 Uiso calc PR 0.50 A 1 H C4 0.5317(4) 0.8122(13) 0.7305(9) 0.050(2) Uani d P 0.50 A 1 C H4 0.5410 0.7329 0.8110 0.061 Uiso calc PR 0.50 A 1 H C5 0.46863(16) 0.8788(5) 0.7498(6) 0.0716(11) Uani d P 0.50 A 1 C H5A 0.4633 0.9105 0.8482 0.086 Uiso calc PR 0.50 A 1 H H5B 0.4638 0.9912 0.6957 0.086 Uiso calc PR 0.50 A 1 H C6 0.42111(15) 0.7486(4) 0.7087(4) 0.0494(8) Uani d P 0.50 A 1 C C7 0.5720(2) 0.9764(8) 0.7370(8) 0.0853(14) Uani d P 0.50 A 1 C F71 0.5673(4) 1.0959(13) 0.6416(12) 0.106(2) Uani d P 0.50 A 1 F F72 0.6284(3) 0.9108(10) 0.7341(9) 0.0882(18) Uani d P 0.50 A 1 F F73 0.5690(4) 1.0556(19) 0.8647(12) 0.117(3) Uani d P 0.50 A 1 F C11 0.38914(14) 0.4772(4) 0.5833(4) 0.0471(8) Uani d . 1 A . C C12 0.38129(17) 0.3264(5) 0.6665(4) 0.0582(9) Uani d . 1 . . C C13 0.33749(19) 0.1999(5) 0.6425(5) 0.0682(11) Uani d . 1 A . C H13 0.3329 0.0976 0.7007 0.082 Uiso calc R 1 . . H C14 0.30078(16) 0.2291(5) 0.5302(5) 0.0598(10) Uani d . 1 . . C C15 0.30643(15) 0.3831(5) 0.4464(4) 0.0552(9) Uani d . 1 A . C C16 0.35123(15) 0.5066(5) 0.4716(4) 0.0505(8) Uani d . 1 . . C H16 0.3559 0.6091 0.4138 0.061 Uiso calc R 1 A . H C17 0.26144(15) 0.5750(6) 0.2734(5) 0.0714(12) Uani d . 1 . . C H17A 0.2676 0.6724 0.3417 0.086 Uiso calc R 1 . . H H17B 0.2223 0.5887 0.2358 0.086 Uiso calc R 1 . . H C18 0.30325(18) 0.5958(6) 0.1598(5) 0.0674(11) Uani d . 1 . . C C19 0.3355(2) 0.6130(8) 0.0667(7) 0.0939(15) Uani d . 1 . . C H19 0.3614 0.6268 -0.0080 0.113 Uiso calc R 1 . . H C2A 0.49118(16) 0.5708(6) 0.5654(5) 0.0640(10) Uani d P 0.50 A 2 C C3A 0.53841(18) 0.7023(7) 0.6051(6) 0.0942(18) Uani d P 0.50 A 2 C H3A1 0.5645 0.6406 0.6702 0.113 Uiso calc PR 0.50 A 2 H H3A2 0.5608 0.7314 0.5212 0.113 Uiso calc PR 0.50 A 2 H C4A 0.5200(4) 0.8698(15) 0.6672(12) 0.063(2) Uani d P 0.50 A 2 C H4A 0.5103 0.9467 0.5856 0.075 Uiso calc PR 0.50 A 2 H C5A 0.46863(16) 0.8788(5) 0.7498(6) 0.0716(11) Uani d P 0.50 A 2 C H5A1 0.4534 1.0035 0.7450 0.086 Uiso calc PR 0.50 A 2 H H5A2 0.4791 0.8549 0.8471 0.086 Uiso calc PR 0.50 A 2 H C6A 0.42111(15) 0.7486(4) 0.7087(4) 0.0494(8) Uani d P 0.50 A 2 C C7A 0.5720(2) 0.9764(8) 0.7370(8) 0.0853(14) Uani d P 0.50 A 2 C F71A 0.5530(3) 1.1556(10) 0.7580(19) 0.130(3) Uani d P 0.50 A 2 F F72A 0.6130(6) 0.999(2) 0.6412(18) 0.176(5) Uani d P 0.50 A 2 F F73A 0.5865(5) 0.9260(16) 0.8501(17) 0.150(5) Uani d P 0.50 A 2 F loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 0.0866(8) 0.0809(7) 0.1298(11) -0.0384(6) 0.0084(8) -0.0115(9) F1 0.1063(18) 0.0685(13) 0.0805(18) 0.0031(12) -0.0282(16) 0.0159(13) O1 0.0676(17) 0.113(3) 0.118(3) 0.0031(17) 0.0111(19) -0.065(3) O2 0.0556(16) 0.0640(15) 0.097(2) -0.0040(12) 0.0179(16) -0.0202(16) O3 0.0567(15) 0.084(2) 0.0692(18) -0.0152(13) -0.0135(14) -0.0045(17) N1 0.0473(15) 0.0494(15) 0.0445(16) 0.0001(12) -0.0048(13) -0.0046(13) C2 0.051(2) 0.077(3) 0.064(2) 0.0024(19) 0.0037(19) -0.020(2) C3 0.047(2) 0.120(4) 0.116(4) -0.012(2) 0.004(2) -0.055(4) C4 0.052(5) 0.066(5) 0.033(5) -0.012(4) -0.004(4) 0.007(4) C5 0.060(2) 0.060(2) 0.095(3) -0.0023(17) -0.003(2) -0.023(2) C6 0.049(2) 0.0476(18) 0.052(2) 0.0001(15) 0.0006(16) 0.0001(17) C7 0.068(3) 0.076(3) 0.111(5) -0.022(3) 0.009(4) -0.011(4) F71 0.101(6) 0.091(5) 0.125(6) -0.052(4) -0.028(5) 0.038(5) F72 0.053(3) 0.116(5) 0.096(5) -0.016(3) 0.004(4) -0.015(4) F73 0.102(6) 0.126(7) 0.123(7) -0.044(6) 0.014(5) -0.054(7) C11 0.0494(18) 0.0434(18) 0.048(2) 0.0028(15) 0.0006(17) -0.0077(17) C12 0.065(2) 0.053(2) 0.057(2) 0.0045(17) -0.0067(19) -0.0021(19) C13 0.086(3) 0.046(2) 0.072(3) -0.0014(19) 0.014(3) 0.004(2) C14 0.055(2) 0.054(2) 0.071(3) -0.0095(17) 0.0076(19) -0.005(2) C15 0.050(2) 0.062(2) 0.054(2) -0.0038(17) 0.0055(17) -0.0130(18) C16 0.0482(18) 0.0542(19) 0.049(2) -0.0010(15) 0.0022(16) 0.0006(17) C17 0.049(2) 0.083(3) 0.082(3) 0.0090(18) -0.020(2) -0.015(3) C18 0.058(2) 0.077(3) 0.067(3) -0.003(2) -0.015(2) -0.002(2) C19 0.083(3) 0.112(4) 0.088(4) -0.013(3) -0.005(3) 0.008(3) C2A 0.051(2) 0.077(3) 0.064(2) 0.0024(19) 0.0037(19) -0.020(2) C3A 0.047(2) 0.120(4) 0.116(4) -0.012(2) 0.004(2) -0.055(4) C4A 0.054(5) 0.081(7) 0.053(6) -0.019(5) 0.005(5) -0.005(5) C5A 0.060(2) 0.060(2) 0.095(3) -0.0023(17) -0.003(2) -0.023(2) C6A 0.049(2) 0.0476(18) 0.052(2) 0.0001(15) 0.0006(16) 0.0001(17) C7A 0.068(3) 0.076(3) 0.111(5) -0.022(3) 0.009(4) -0.011(4) F71A 0.108(5) 0.086(5) 0.195(12) -0.035(4) -0.032(8) 0.008(7) F72A 0.104(7) 0.213(12) 0.212(13) -0.087(9) 0.049(9) -0.035(10) F73A 0.142(9) 0.130(7) 0.179(12) -0.026(6) -0.113(9) 0.017(8) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C15 O3 C17 118.2(3) C6 N1 C2 124.5(3) C6 N1 C11 117.2(3) C2 N1 C11 118.1(3) O1 C2 N1 120.3(3) O1 C2 C3 122.3(4) N1 C2 C3 117.4(3) C4 C3 C2 119.0(5) C4 C3 H3A 107.6 C2 C3 H3A 107.6 C4 C3 H3B 107.6 C2 C3 H3B 107.6 H3A C3 H3B 107.0 C3 C4 C7 113.9(7) C3 C4 C5 112.0(6) C7 C4 C5 108.8(7) C3 C4 H4 107.3 C7 C4 H4 107.3 C5 C4 H4 107.3 C6 C5 C4 117.1(4) C6 C5 H5A 108.0 C4 C5 H5A 108.0 C6 C5 H5B 108.0 C4 C5 H5B 108.0 H5A C5 H5B 107.3 O2 C6 N1 120.2(3) O2 C6 C5 121.8(3) N1 C6 C5 118.0(3) F71 C7 F73 110.5(8) F71 C7 F72 107.7(7) F73 C7 F72 102.4(8) F71 C7 C4 117.5(7) F73 C7 C4 110.1(7) F72 C7 C4 107.5(6) C12 C11 C16 119.0(3) C12 C11 N1 119.4(3) C16 C11 N1 121.5(3) C11 C12 F1 118.4(3) C11 C12 C13 122.4(4) F1 C12 C13 119.2(4) C14 C13 C12 118.0(4) C14 C13 H13 121.0 C12 C13 H13 121.0 C13 C14 C15 121.1(3) C13 C14 Cl1 118.2(3) C15 C14 Cl1 120.7(3) O3 C15 C14 116.0(3) O3 C15 C16 124.3(4) C14 C15 C16 119.7(4) C15 C16 C11 119.7(3) C15 C16 H16 120.1 C11 C16 H16 120.1 O3 C17 C18 112.8(3) O3 C17 H17A 109.0 C18 C17 H17A 109.0 O3 C17 H17B 109.0 C18 C17 H17B 109.0 H17A C17 H17B 107.8 C19 C18 C17 178.3(5) C18 C19 H19 180.0 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Cl1 C14 1.721(4) F1 C12 1.362(4) O1 C2 1.189(4) O2 C6 1.201(4) O3 C15 1.366(5) O3 C17 1.415(5) N1 C6 1.386(4) N1 C2 1.402(5) N1 C11 1.441(4) C2 C3 1.490(6) C3 C4 1.441(10) C3 H3A 0.9700 C3 H3B 0.9700 C4 C7 1.508(10) C4 C5 1.533(10) C4 H4 0.9800 C5 C6 1.492(5) C5 H5A 0.9700 C5 H5B 0.9700 C7 F71 1.259(10) C7 F73 1.343(11) C7 F72 1.376(9) C11 C12 1.361(5) C11 C16 1.387(5) C12 C13 1.378(6) C13 C14 1.374(6) C13 H13 0.9300 C14 C15 1.377(6) C15 C16 1.383(5) C16 H16 0.9300 C17 C18 1.450(7) C17 H17A 0.9700 C17 H17B 0.9700 C18 C19 1.158(7) C19 H19 0.9300 C4A H4A 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C19 H19 O2 1_554 0.93 2.49 3.287(7) 143 y C17 H17B O2 3_554 0.97 2.52 3.359(4) 145 y C4 H4 O1 2_665 0.98 2.33 3.175(10) 144 y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 N1 C2 O1 175.9(4) C11 N1 C2 O1 2.2(6) C6 N1 C2 C3 -4.3(6) C11 N1 C2 C3 -177.9(4) O1 C2 C3 C4 -156.6(6) N1 C2 C3 C4 23.5(8) C2 C3 C4 C7 -162.8(6) C2 C3 C4 C5 -38.8(9) C3 C4 C5 C6 37.1(8) C7 C4 C5 C6 163.9(5) C2 N1 C6 O2 -176.6(4) C11 N1 C6 O2 -2.9(5) C2 N1 C6 C5 3.5(5) C11 N1 C6 C5 177.2(3) C4 C5 C6 O2 159.8(5) C4 C5 C6 N1 -20.4(7) C3 C4 C7 F71 61.1(11) C5 C4 C7 F71 -64.6(11) C3 C4 C7 F73 -171.3(10) C5 C4 C7 F73 63.1(11) C3 C4 C7 F72 -60.5(9) C5 C4 C7 F72 173.9(7) C6 N1 C11 C12 -88.3(4) C2 N1 C11 C12 85.8(4) C6 N1 C11 C16 89.0(4) C2 N1 C11 C16 -96.9(4) C16 C11 C12 F1 -177.5(3) N1 C11 C12 F1 -0.2(5) C16 C11 C12 C13 1.0(5) N1 C11 C12 C13 178.4(3) C11 C12 C13 C14 0.0(6) F1 C12 C13 C14 178.5(3) C12 C13 C14 C15 -1.9(6) C12 C13 C14 Cl1 180.0(3) C17 O3 C15 C14 166.3(3) C17 O3 C15 C16 -13.5(5) C13 C14 C15 O3 -177.0(3) Cl1 C14 C15 O3 1.1(5) C13 C14 C15 C16 2.8(6) Cl1 C14 C15 C16 -179.1(3) O3 C15 C16 C11 178.0(3) C14 C15 C16 C11 -1.8(5) C12 C11 C16 C15 -0.1(5) N1 C11 C16 C15 -177.4(3) C15 O3 C17 C18 84.3(4) O3 C17 C18 C19 120(17)