#------------------------------------------------------------------------------ #$Date: 2008-02-29 13:03:34 +0200 (Fri, 29 Feb 2008) $ #$Revision: 179 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2015262.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2015262 loop_ _publ_author_name 'Hamann, Uwe' 'K\"ampen, Jan' 'Bubenitschek, Peter' 'Hopf, Henning' 'Jones, Peter G.' _publ_section_title ; C\\tb C---H systems as hydrogen-bond donors and acceptors: trans-1,2-diethynylcyclohexane-1,2-diol and trans-1,4-diprop-2-ynylcyclohexane-1,4-diol monohydrate ; _journal_coeditor_code LN3003 _journal_issue 4 _journal_name_full 'Acta Crystallographica, Section C' _journal_page_first o178 _journal_page_last o181 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'C12 H18 O3' _chemical_formula_moiety 'C12 H18 O3' _chemical_formula_sum 'C12 H18 O3' _chemical_formula_weight 210.26 _chemical_name_systematic ; trans-1,4-diprop-2-ynylcyclohexane-1,4-diol hydrate ; _symmetry_cell_setting triclinic _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 93.384(16) _cell_angle_beta 102.410(16) _cell_angle_gamma 102.309(16) _cell_formula_units_Z 2 _cell_length_a 6.6112(18) _cell_length_b 7.2474(19) _cell_length_c 12.577(3) _cell_measurement_reflns_used 56 _cell_measurement_temperature 153(2) _cell_measurement_theta_max 11.5 _cell_measurement_theta_min 10 _cell_volume 571.5(3) _computing_cell_refinement DIF4 _computing_data_collection 'DIF4 (Stoe & Cie, 1992)' _computing_data_reduction 'REDU4 (Stoe & Cie, 1992)' _computing_molecular_graphics 'XP (Siemens, 1994)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 153(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Stoe STADI-4' _diffrn_measurement_method \w/\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0212 _diffrn_reflns_av_sigmaI/netI 0.0175 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 2374 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.02 _diffrn_reflns_theta_min 3.18 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.086 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.222 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 228 _exptl_crystal_size_max 0.70 _exptl_crystal_size_mid 0.60 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.204 _refine_diff_density_min -0.201 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.053 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 160 _refine_ls_number_reflns 2022 _refine_ls_number_restraints 7 _refine_ls_restrained_S_all 1.052 _refine_ls_R_factor_all 0.0373 _refine_ls_R_factor_gt 0.0340 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0362P)^2^+0.2046P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0819 _refine_ls_wR_factor_ref 0.0844 _reflns_number_gt 1849 _reflns_number_total 2022 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ln3003.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy O O1 0.84693(14) 0.39717(13) 0.82084(7) 0.0223(2) Uani d D 1 H H01 0.730(3) 0.414(3) 0.7798(14) 0.047(5) Uiso d D 1 C C1 0.81482(19) 0.36043(17) 0.92784(10) 0.0196(3) Uani d . 1 C C2 1.01113(19) 0.30015(17) 0.98931(10) 0.0216(3) Uani d . 1 H H2A 1.0331 0.1909 0.9457 0.026 Uiso calc R 1 H H2B 0.9864 0.2578 1.0598 0.026 Uiso calc R 1 C C3 0.78829(19) 0.53954(17) 0.98833(10) 0.0212(3) Uani d . 1 H H3A 0.6681 0.5832 0.9440 0.025 Uiso calc R 1 H H3B 0.7528 0.5087 1.0588 0.025 Uiso calc R 1 C C4 0.6122(2) 0.20182(18) 0.91501(11) 0.0243(3) Uani d . 1 H H4A 0.5899 0.1765 0.9886 0.029 Uiso calc R 1 H H4B 0.4884 0.2466 0.8754 0.029 Uiso calc R 1 C C5 0.6205(2) 0.02421(19) 0.85603(11) 0.0249(3) Uani d . 1 C C6 0.6284(2) -0.1173(2) 0.80689(12) 0.0296(3) Uani d D 1 H H6 0.633(3) -0.230(2) 0.7677(14) 0.046(5) Uiso d D 1 O O1' 0.49797(14) 0.45806(12) 0.67637(7) 0.0216(2) Uani d D 1 H H01' 0.383(3) 0.477(3) 0.6934(15) 0.049(5) Uiso d D 1 C C1' 0.44261(19) 0.34810(17) 0.57046(10) 0.0193(3) Uani d . 1 C C2' 0.27312(19) 0.41941(18) 0.49225(10) 0.0206(3) Uani d . 1 H H2'1 0.1468 0.4108 0.5237 0.025 Uiso calc R 1 H H2'2 0.2287 0.3366 0.4219 0.025 Uiso calc R 1 C C3' 0.64711(19) 0.37550(18) 0.52919(10) 0.0206(3) Uani d . 1 H H3'1 0.7588 0.3389 0.5842 0.025 Uiso calc R 1 H H3'2 0.6207 0.2906 0.4606 0.025 Uiso calc R 1 C C4' 0.3643(2) 0.13701(18) 0.58442(11) 0.0238(3) Uani d . 1 H H4'1 0.3150 0.0628 0.5112 0.029 Uiso calc R 1 H H4'2 0.4850 0.0905 0.6260 0.029 Uiso calc R 1 C C5' 0.1907(2) 0.10345(18) 0.64148(11) 0.0265(3) Uani d . 1 C C6' 0.0553(2) 0.0849(2) 0.69061(13) 0.0354(4) Uani d D 1 H H6' -0.049(3) 0.073(3) 0.7311(15) 0.053(5) Uiso d D 1 O O3 0.17155(17) 0.58949(16) 0.73225(10) 0.0375(3) Uani d D 1 H H03 0.070(3) 0.536(3) 0.7641(17) 0.071(7) Uiso d D 1 H H04 0.179(4) 0.711(2) 0.739(2) 0.097(9) Uiso d D 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0185(5) 0.0289(5) 0.0189(5) 0.0044(4) 0.0042(4) 0.0032(4) C1 0.0181(6) 0.0219(6) 0.0185(6) 0.0035(5) 0.0044(5) 0.0027(5) C2 0.0223(6) 0.0198(6) 0.0223(6) 0.0059(5) 0.0039(5) 0.0011(5) C3 0.0184(6) 0.0243(7) 0.0218(6) 0.0077(5) 0.0043(5) 0.0024(5) C4 0.0211(7) 0.0247(7) 0.0262(7) 0.0020(5) 0.0071(5) 0.0019(5) C5 0.0197(6) 0.0257(7) 0.0261(7) -0.0007(5) 0.0037(5) 0.0063(6) C6 0.0292(7) 0.0230(7) 0.0338(8) 0.0009(6) 0.0066(6) 0.0027(6) O1' 0.0201(5) 0.0253(5) 0.0193(5) 0.0062(4) 0.0044(4) -0.0005(4) C1' 0.0198(6) 0.0198(6) 0.0185(6) 0.0054(5) 0.0042(5) 0.0007(5) C2' 0.0168(6) 0.0239(6) 0.0211(6) 0.0049(5) 0.0042(5) 0.0013(5) C3' 0.0186(6) 0.0233(6) 0.0216(6) 0.0085(5) 0.0044(5) 0.0036(5) C4' 0.0246(7) 0.0220(7) 0.0264(7) 0.0071(5) 0.0077(5) 0.0036(5) C5' 0.0282(7) 0.0215(7) 0.0283(7) 0.0036(5) 0.0053(6) 0.0033(5) C6' 0.0321(8) 0.0365(8) 0.0381(8) 0.0028(6) 0.0141(7) 0.0054(7) O3 0.0317(6) 0.0352(6) 0.0502(7) 0.0050(5) 0.0224(5) 0.0035(5) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 . 1.4381(15) y O1 H01 . 0.871(15) ? C1 C2 . 1.5242(17) ? C1 C3 . 1.5273(17) ? C1 C4 . 1.5396(17) ? C2 C3 2_767 1.5270(18) ? C2 H2A . 0.9900 ? C2 H2B . 0.9900 ? C3 H3A . 0.9900 ? C3 H3B . 0.9900 ? C4 C5 . 1.4646(19) ? C4 H4A . 0.9900 ? C4 H4B . 0.9900 ? C5 C6 . 1.182(2) y C6 H6 . 0.939(16) ? O1' C1' . 1.4437(15) y O1' H01' . 0.867(15) ? C1' C2' . 1.5242(17) ? C1' C3' . 1.5284(17) ? C1' C4' . 1.5403(18) ? C2' C3' 2_666 1.5279(18) ? C2' H2'1 . 0.9900 ? C2' H2'2 . 0.9900 ? C3' H3'1 . 0.9900 ? C3' H3'2 . 0.9900 ? C4' C5' . 1.4654(19) ? C4' H4'1 . 0.9900 ? C4' H4'2 . 0.9900 ? C5' C6' . 1.182(2) y C6' H6' . 0.932(16) ? O3 H03 . 0.884(16) ? O3 H04 . 0.872(17) ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C1 O1 H01 . . 109.5(12) ? O1 C1 C2 . . 107.03(10) ? O1 C1 C3 . . 110.20(10) ? C2 C1 C3 . . 110.23(10) ? O1 C1 C4 . . 108.81(10) ? C2 C1 C4 . . 111.28(10) ? C3 C1 C4 . . 109.25(10) ? C1 C2 C3 . 2_767 112.44(10) ? C1 C2 H2A . . 109.1 ? C3 C2 H2A 2_767 . 109.1 ? C1 C2 H2B . . 109.1 ? C3 C2 H2B 2_767 . 109.1 ? H2A C2 H2B . . 107.8 ? C2 C3 C1 2_767 . 112.33(10) ? C2 C3 H3A 2_767 . 109.1 ? C1 C3 H3A . . 109.1 ? C2 C3 H3B 2_767 . 109.1 ? C1 C3 H3B . . 109.1 ? H3A C3 H3B . . 107.9 ? C5 C4 C1 . . 113.46(11) ? C5 C4 H4A . . 108.9 ? C1 C4 H4A . . 108.9 ? C5 C4 H4B . . 108.9 ? C1 C4 H4B . . 108.9 ? H4A C4 H4B . . 107.7 ? C6 C5 C4 . . 178.75(14) y C5 C6 H6 . . 179.4(11) ? C1' O1' H01' . . 109.5(12) ? O1' C1' C2' . . 110.06(10) ? O1' C1' C3' . . 106.34(10) ? C2' C1' C3' . . 110.48(10) ? O1' C1' C4' . . 108.92(10) ? C2' C1' C4' . . 111.30(10) ? C3' C1' C4' . . 109.61(10) ? C1' C2' C3' . 2_666 112.21(10) ? C1' C2' H2'1 . . 109.2 ? C3' C2' H2'1 2_666 . 109.2 ? C1' C2' H2'2 . . 109.2 ? C3' C2' H2'2 2_666 . 109.2 ? H2'1 C2' H2'2 . . 107.9 ? C2' C3' C1' 2_666 . 112.22(10) ? C2' C3' H3'1 2_666 . 109.2 ? C1' C3' H3'1 . . 109.2 ? C2' C3' H3'2 2_666 . 109.2 ? C1' C3' H3'2 . . 109.2 ? H3'1 C3' H3'2 . . 107.9 ? C5' C4' C1' . . 113.00(11) ? C5' C4' H4'1 . . 109.0 ? C1' C4' H4'1 . . 109.0 ? C5' C4' H4'2 . . 109.0 ? C1' C4' H4'2 . . 109.0 ? H4'1 C4' H4'2 . . 107.8 ? C6' C5' C4' . . 176.68(15) y C5' C6' H6' . . 178.2(12) ? H03 O3 H04 . . 107(2) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion O1 C1 C2 C3 2_767 66.02(13) C3 C1 C2 C3 2_767 -53.83(14) C4 C1 C2 C3 2_767 -175.21(10) O1 C1 C3 C2 2_767 -64.15(13) C2 C1 C3 C2 2_767 53.77(15) C4 C1 C3 C2 2_767 176.35(10) O1 C1 C4 C5 . 58.64(14) C2 C1 C4 C5 . -59.06(14) C3 C1 C4 C5 . 179.00(11) O1' C1' C2' C3' 2_666 63.20(13) C3' C1' C2' C3' 2_666 -53.94(14) C4' C1' C2' C3' 2_666 -175.95(10) O1' C1' C3' C2' 2_666 -65.47(13) C2' C1' C3' C2' 2_666 53.94(15) C4' C1' C3' C2' 2_666 176.94(10) O1' C1' C4' C5' . 54.05(14) C2' C1' C4' C5' . -67.47(14) C3' C1' C4' C5' . 170.01(11) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1 H01 O1' . 0.871(15) 1.882(15) 2.7470(14) 172.2(17) O1' H01' O3 . 0.867(15) 1.895(15) 2.7399(15) 164.4(17) O3 H03 O1 1_455 0.884(16) 1.899(16) 2.7795(15) 174(2) C6 H6 O1' 1_545 0.939(16) 2.370(17) 3.2516(19) 156.3(15) C6' H6' O1 1_455 0.932(16) 2.825(18) 3.4004(19) 121.0(14)