#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2015317.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2015317 loop_ _publ_author_name 'Kolev, Tsonko' 'Spiteller, Michael' 'Sheldrick, William S.' 'Mayer-Figge, Heike' _publ_section_title ; L-Argininamidium bis(hydrogensquarate) ; _journal_coeditor_code KP2003 _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o299 _journal_page_last o300 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'C6 H17 N5 O 2+, 2C4 H O4 -' _chemical_formula_moiety 'C6 H17 N5 O 2+, 2C4 H O4 -' _chemical_formula_sum 'C14 H19 N5 O9' _chemical_formula_weight 401.34 _chemical_name_systematic ; 1-[4-(Aminocarbonyl)butyl]guanidinium bis(hydrogensquarate) ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 101.90(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 5.1850(10) _cell_length_b 16.668(3) _cell_length_c 10.458(2) _cell_measurement_reflns_used 15 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 14.43 _cell_measurement_theta_min 8.0 _cell_volume 884.4(3) _computing_cell_refinement R3m/V _computing_data_collection 'R3m/V (Siemens, 1989)' _computing_data_reduction 'XDISK (Siemens, 1989)' _computing_molecular_graphics 'SHELXTL-Plus (Sheldrick, 1995)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 294(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Siemens P4 four-circle diffractometer' _diffrn_measurement_method 'Profile fitted omega' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0297 _diffrn_reflns_av_sigmaI/netI 0.0431 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 23 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 2919 _diffrn_reflns_theta_full 30.00 _diffrn_reflns_theta_max 30.00 _diffrn_reflns_theta_min 2.34 _diffrn_standards_decay_% 2 _diffrn_standards_interval_count 100 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.127 _exptl_absorpt_correction_T_max 0.9764547 _exptl_absorpt_correction_T_min 0.9445504 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(XPREP in SHELXTL; Sheldrick, 1995)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.507 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 420 _exptl_crystal_size_max 0.54 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.22 _refine_diff_density_max 0.230 _refine_diff_density_min -0.192 _refine_ls_extinction_coef 0.023(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.008 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 260 _refine_ls_number_reflns 2659 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.008 _refine_ls_R_factor_all 0.0740 _refine_ls_R_factor_gt 0.0446 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0460P)^2^+0.0784P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0911 _refine_ls_wR_factor_ref 0.0993 _reflns_number_gt 1972 _reflns_number_total 2659 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file kp2003.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21' _cod_original_cell_volume 884.5(3) _cod_database_code 2015317 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy C C1' 0.6409(6) 0.32405(19) 0.2642(3) 0.0369(7) Uani d . 1 O O1' 0.7821(5) 0.37009(17) 0.3405(2) 0.0555(7) Uani d . 1 C C2' 0.6141(6) 0.30259(19) 0.1239(3) 0.0356(6) Uani d . 1 O O2' 0.7203(5) 0.32579(16) 0.0350(2) 0.0528(6) Uani d . 1 C C3' 0.4086(6) 0.24732(19) 0.1383(3) 0.0347(6) Uani d . 1 O O3' 0.2690(5) 0.19802(15) 0.0537(2) 0.0478(6) Uani d . 1 H H3' 0.1569 0.1762 0.0868 0.059(12) Uiso calc R 1 C C4' 0.4284(6) 0.26614(19) 0.2734(3) 0.0350(6) Uani d . 1 O O4' 0.3218(5) 0.24522(15) 0.3652(2) 0.0474(6) Uani d . 1 C C5' 0.4129(6) 0.53035(18) 0.7961(3) 0.0310(6) Uani d . 1 O O5' 0.5537(4) 0.48650(14) 0.8744(2) 0.0426(5) Uani d . 1 C C6' 0.3731(6) 0.54673(18) 0.6522(3) 0.0316(6) Uani d . 1 O O6' 0.4717(4) 0.51994(13) 0.56320(19) 0.0396(5) Uani d . 1 C C7' 0.1743(6) 0.60470(17) 0.6659(3) 0.0324(6) Uani d . 1 O O7' 0.0293(5) 0.65092(15) 0.5784(2) 0.0481(6) Uani d . 1 H H7' -0.0551 0.6820 0.6146 0.058 Uiso calc R 1 C C8' 0.2037(5) 0.58970(18) 0.8027(3) 0.0322(6) Uani d . 1 O O8' 0.1007(5) 0.61370(14) 0.8947(2) 0.0437(6) Uani d . 1 C C1 1.0043(5) 0.35767(17) 0.7428(3) 0.0289(5) Uani d . 1 O O1 1.1166(4) 0.37749(14) 0.6554(2) 0.0409(5) Uani d . 1 N N1 1.1117(5) 0.36099(17) 0.8694(2) 0.0391(6) Uani d . 1 H H11 1.2706 0.3780 0.8947 0.047 Uiso calc R 1 H H12 1.0223 0.3462 0.9260 0.047 Uiso calc R 1 C C2 0.7251(5) 0.32405(16) 0.7102(3) 0.0268(5) Uani d . 1 H H2 0.6258 0.3446 0.7734 0.032 Uiso calc R 1 N N2 0.6032(4) 0.35426(15) 0.5779(2) 0.0329(5) Uani d . 1 H H21 0.5479 0.4044 0.5839 0.044 Uiso calc R 1 H H22 0.4669 0.3233 0.5431 0.044 Uiso calc R 1 H H23 0.7217 0.3532 0.5273 0.044 Uiso calc R 1 C C3 0.7263(5) 0.23211(17) 0.7149(3) 0.0324(6) Uani d . 1 H H31 0.7747 0.2114 0.6364 0.042(9) Uiso calc R 1 H H32 0.8584 0.2144 0.7892 0.052(10) Uiso calc R 1 C C4 0.4599(5) 0.19779(16) 0.7259(3) 0.0305(6) Uani d . 1 H H41 0.3258 0.2191 0.6555 0.036(8) Uiso calc R 1 H H42 0.4182 0.2152 0.8078 0.047(10) Uiso calc R 1 C C5 0.4518(6) 0.10630(17) 0.7200(3) 0.0374(7) Uani d . 1 H H51 0.2789 0.0879 0.7289 0.045 Uiso calc R 1 H H52 0.4801 0.0887 0.6355 0.045 Uiso calc R 1 N N6 0.6516(5) 0.07069(15) 0.8228(2) 0.0394(6) Uani d . 1 H H6 0.6643 0.0894 0.9005 0.047 Uiso calc R 1 C C7 0.8163(6) 0.01196(17) 0.8076(3) 0.0329(6) Uani d . 1 N N8 0.8127(5) -0.02190(18) 0.6928(2) 0.0447(7) Uani d . 1 H H81 0.7013 -0.0060 0.6248 0.054 Uiso calc R 1 H H82 0.9218 -0.0598 0.6861 0.054 Uiso calc R 1 N N9 0.9916(6) -0.01320(19) 0.9115(3) 0.0518(7) Uani d . 1 H H91 1.1003 -0.0509 0.9033 0.062 Uiso calc R 1 H H92 0.9962 0.0083 0.9867 0.062 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1' 0.0361(15) 0.0415(17) 0.0358(15) -0.0083(14) 0.0134(12) -0.0004(13) O1' 0.0566(14) 0.0678(17) 0.0462(13) -0.0313(14) 0.0204(11) -0.0132(12) C2' 0.0355(15) 0.0362(15) 0.0363(15) -0.0027(13) 0.0101(12) 0.0037(13) O2' 0.0561(14) 0.0659(17) 0.0406(12) -0.0165(12) 0.0200(11) 0.0075(11) C3' 0.0359(14) 0.0385(16) 0.0304(13) -0.0048(13) 0.0085(11) 0.0026(12) O3' 0.0545(14) 0.0566(15) 0.0344(11) -0.0252(12) 0.0143(10) -0.0056(10) C4' 0.0327(14) 0.0397(17) 0.0351(15) -0.0068(12) 0.0127(12) -0.0017(13) O4' 0.0514(13) 0.0590(15) 0.0371(11) -0.0245(12) 0.0214(10) -0.0080(11) C5' 0.0321(14) 0.0290(14) 0.0303(13) -0.0005(12) 0.0028(11) -0.0014(11) O5' 0.0443(12) 0.0413(12) 0.0370(11) 0.0074(11) -0.0039(9) 0.0045(10) C6' 0.0328(14) 0.0306(14) 0.0314(14) 0.0011(11) 0.0064(11) 0.0018(12) O6' 0.0459(12) 0.0433(13) 0.0314(10) 0.0126(10) 0.0117(9) 0.0024(9) C7' 0.0362(15) 0.0318(15) 0.0292(13) 0.0067(12) 0.0069(11) 0.0051(12) O7' 0.0540(13) 0.0613(15) 0.0311(10) 0.0297(12) 0.0135(10) 0.0105(11) C8' 0.0347(14) 0.0340(15) 0.0277(13) 0.0011(12) 0.0063(11) 0.0030(11) O8' 0.0556(14) 0.0494(14) 0.0295(10) 0.0162(11) 0.0165(10) 0.0056(10) C1 0.0257(12) 0.0290(13) 0.0333(13) 0.0034(11) 0.0092(10) -0.0017(11) O1 0.0315(10) 0.0567(14) 0.0378(11) -0.0097(10) 0.0153(9) 0.0016(10) N1 0.0313(12) 0.0547(16) 0.0319(12) -0.0095(13) 0.0077(10) -0.0009(12) C2 0.0225(12) 0.0308(13) 0.0280(13) 0.0018(10) 0.0077(10) 0.0005(10) N2 0.0287(11) 0.0352(12) 0.0361(12) 0.0004(10) 0.0096(9) 0.0052(11) C3 0.0275(13) 0.0295(13) 0.0419(15) 0.0017(11) 0.0112(11) -0.0015(12) C4 0.0280(13) 0.0273(13) 0.0383(15) 0.0025(11) 0.0115(11) 0.0012(12) C5 0.0393(16) 0.0269(14) 0.0443(16) 0.0020(13) 0.0048(13) -0.0013(13) N6 0.0579(16) 0.0320(13) 0.0278(11) 0.0091(12) 0.0079(11) -0.0034(10) C7 0.0357(14) 0.0314(14) 0.0314(14) -0.0035(12) 0.0063(11) -0.0008(12) N8 0.0444(15) 0.0524(17) 0.0345(14) 0.0170(13) 0.0016(11) -0.0070(13) N9 0.0631(18) 0.0531(17) 0.0335(13) 0.0162(16) -0.0031(12) 0.0025(13) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O1' C1' C4' 135.4(3) O1' C1' C2' 135.2(3) C4' C1' C2' 89.3(2) O2' C2' C3' 137.2(3) O2' C2' C1' 134.4(3) C3' C2' C1' 88.4(2) O3' C3' C4' 136.2(3) O3' C3' C2' 130.4(3) C4' C3' C2' 93.4(2) C3' O3' H3' 109.5 O4' C4' C3' 138.0(3) O4' C4' C1' 133.1(3) C3' C4' C1' 88.9(2) O5' C5' C8' 135.4(3) O5' C5' C6' 136.1(3) C8' C5' C6' 88.5(2) O6' C6' C7' 137.1(3) O6' C6' C5' 134.2(3) C7' C6' C5' 88.6(2) O7' C7' C8' 136.9(3) O7' C7' C6' 130.2(3) C8' C7' C6' 92.9(2) C7' O7' H7' 109.5 O8' C8' C7' 137.4(3) O8' C8' C5' 132.7(3) C7' C8' C5' 89.9(2) O1 C1 N1 124.5(3) O1 C1 C2 120.5(2) N1 C1 C2 115.0(2) C1 N1 H11 120.0 C1 N1 H12 120.0 H11 N1 H12 120.0 N2 C2 C1 106.6(2) N2 C2 C3 111.5(2) C1 C2 C3 111.3(2) N2 C2 H2 109.1 C1 C2 H2 109.1 C3 C2 H2 109.1 C2 N2 H21 109.5 C2 N2 H22 109.5 H21 N2 H22 109.5 C2 N2 H23 109.5 H21 N2 H23 109.5 H22 N2 H23 109.5 C4 C3 C2 112.4(2) C4 C3 H31 109.1 C2 C3 H31 109.1 C4 C3 H32 109.1 C2 C3 H32 109.1 H31 C3 H32 107.9 C3 C4 C5 113.0(2) C3 C4 H41 109.0 C5 C4 H41 109.0 C3 C4 H42 109.0 C5 C4 H42 109.0 H41 C4 H42 107.8 N6 C5 C4 111.6(3) N6 C5 H51 109.3 C4 C5 H51 109.3 N6 C5 H52 109.3 C4 C5 H52 109.3 H51 C5 H52 108.0 C7 N6 C5 126.1(2) C7 N6 H6 117.0 C5 N6 H6 117.0 N8 C7 N6 122.2(3) N8 C7 N9 119.0(3) N6 C7 N9 118.8(3) C7 N8 H81 120.0 C7 N8 H82 120.0 H81 N8 H82 120.0 C7 N9 H91 120.0 C7 N9 H92 120.0 H91 N9 H92 120.0 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1' O1' 1.233(4) C1' C4' 1.483(4) C1' C2' 1.489(4) C2' O2' 1.236(3) C2' C3' 1.440(4) C3' O3' 1.311(4) C3' C4' 1.431(4) O3' H3' 0.8200 C4' O4' 1.252(3) C5' O5' 1.221(4) C5' C8' 1.480(4) C5' C6' 1.501(4) C6' O6' 1.235(3) C6' C7' 1.441(4) C7' O7' 1.309(4) C7' C8' 1.429(4) O7' H7' 0.8200 C8' O8' 1.259(3) C1 O1 1.226(3) C1 N1 1.327(4) C1 C2 1.524(4) N1 H11 0.8600 N1 H12 0.8600 C2 N2 1.486(3) C2 C3 1.533(4) C2 H2 0.9800 N2 H21 0.8900 N2 H22 0.8900 N2 H23 0.8900 C3 C4 1.521(4) C3 H31 0.9700 C3 H32 0.9700 C4 C5 1.526(4) C4 H41 0.9700 C4 H42 0.9700 C5 N6 1.457(4) C5 H51 0.9700 C5 H52 0.9700 N6 C7 1.330(4) N6 H6 0.8600 C7 N8 1.324(4) C7 N9 1.332(4) N8 H81 0.8600 N8 H82 0.8600 N9 H91 0.8600 N9 H92 0.8600 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H11 O5' 1_655 0.86 2.37 3.095(3) 142.8 y N1 H12 O2' 1_556 0.86 2.15 2.986(3) 165.3 y N2 H23 O1 . 0.89 2.24 2.646(3) 107.4 y N2 H22 O1 1_455 0.89 2.52 2.831(3) 100.9 y N2 H23 O1' . 0.89 2.06 2.836(3) 145.0 y N2 H22 O4' . 0.89 2.27 3.007(3) 140.3 y N2 H21 O6' . 0.89 1.97 2.841(3) 166.1 y N6 H6 O8' 2_647 0.86 2.27 3.054(3) 151.3 y N8 H82 O1' 2_746 0.86 1.99 2.842(3) 168.4 y N8 H81 O6' 2_646 0.86 2.03 2.863(3) 162.2 y N9 H91 O2' 2_746 0.86 2.29 3.066(4) 149.7 y N9 H92 O5' 2_747 0.86 2.51 2.898(3) 108.4 y N9 H92 O8' 2_647 0.86 2.27 3.035(4) 148.8 y O3' H3' O8' 2_546 0.82 1.74 2.523(3) 160.2 y O7' H7' O4' 2_556 0.82 1.79 2.564(3) 158.1 y