#------------------------------------------------------------------------------ #$Date: 2013-08-29 18:37:19 +0300 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/20/01/2200162.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200162 loop_ _publ_author_name 'Rugutt, Joseph K.' 'Fronczek, Frank R.' 'Franzblau, Scott G.' 'Warner, Isiah M.' _publ_section_title ; Dihydroparthenolide diol, a novel sesquiterpene lactone ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o323 _journal_page_last o325 _journal_volume 57 _journal_year 2001 _chemical_formula_moiety 'C15 H24 O5' _chemical_formula_sum 'C15 H24 O5' _chemical_formula_weight 284.34 _chemical_name_common 'dihydroparthenolide diol' _chemical_name_systematic ; 2,10-dihydroxy-1,6,10-trimethyl-4,14-dioxztricyclo[9.2.1.0<3,7>] tetradecan-5-one ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 9.2706(13) _cell_length_b 10.4565(8) _cell_length_c 15.094(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 300 _cell_measurement_theta_max 42.2 _cell_measurement_theta_min 21.3 _cell_volume 1463.2(4) _computing_cell_refinement 'CAD-4 EXPRESS' _computing_data_collection 'CAD-4 EXPRESS (Enraf-Nonius, 1994)' _computing_data_reduction 'maXus (Mackay et al., 1999)' _computing_molecular_graphics 'ORTEPIII (Burnett & Johnson, 1996)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 300 _diffrn_measured_fraction_theta_full .999 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents .018 _diffrn_reflns_av_sigmaI/netI .017 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 3269 _diffrn_reflns_theta_full 76.0 _diffrn_reflns_theta_max 76.0 _diffrn_reflns_theta_min 5.1 _diffrn_standards_decay_% 3.3 _diffrn_standards_interval_time 40 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .788 _exptl_absorpt_correction_T_max .875 _exptl_absorpt_correction_T_min .808 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details ; (North, et al, 1968) ; _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.291 _exptl_crystal_density_method 'not measured' _exptl_crystal_description fragment _exptl_crystal_F_000 616 _exptl_crystal_size_max .38 _exptl_crystal_size_mid .32 _exptl_crystal_size_min .17 _refine_diff_density_max .17 _refine_diff_density_min -.15 _refine_ls_abs_structure_details '(Flack, 1983), 1217 Friedel pairs' _refine_ls_abs_structure_Flack -.3(2) _refine_ls_extinction_coef .0042(7) _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.068 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 191 _refine_ls_number_reflns 2975 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.068 _refine_ls_R_factor_all .049 _refine_ls_R_factor_gt .044 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean <0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0780P)^2^+0.2091P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .128 _reflns_number_gt 2731 _reflns_number_total 2975 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file cv6008.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2200162 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 .25990(19) .39108(13) .31506(12) .0585(4) Uani d . 1 . . O O2 .3331(2) .20483(16) .36804(16) .0809(6) Uani d . 1 . . O O3 .19097(14) .77712(13) .35784(9) .0413(3) Uani d . 1 . . O O4 .2259(2) .54554(17) .18149(11) .0614(5) Uani d . 1 . . O H4O .303(4) .502(4) .162(2) .092 Uiso d . 1 . . H O5 .50052(18) .98461(15) .40080(14) .0639(5) Uani d . 1 . . O H5O .455(4) 1.063(4) .403(2) .096 Uiso d . 1 . . H C1 .2748(2) .89276(18) .35280(14) .0448(4) Uani d . 1 . . C H1 .2110 .9652 .3653 .054 Uiso calc R 1 . . H C2 .3248(3) .9029(2) .25695(16) .0610(6) Uani d . 1 . . C H2A .3313 .9914 .2382 .073 Uiso calc R 1 . . H H2B .4178 .8620 .2487 .073 Uiso calc R 1 . . H C3 .2076(3) .8328(2) .20715(15) .0581(6) Uani d . 1 . . C H3A .2436 .7991 .1515 .070 Uiso calc R 1 . . H H3B .1262 .8886 .1953 .070 Uiso calc R 1 . . H C4 .1657(2) .7254(2) .27012(12) .0436(4) Uani d . 1 . . C C5 .2678(2) .61033(19) .25950(13) .0432(4) Uani d . 1 . . C H5 .3665 .6421 .2519 .052 Uiso calc R 1 . . H C6 .2624(2) .52513(17) .34328(14) .0423(4) Uani d . 1 . . C H6 .1738 .5440 .3762 .051 Uiso calc R 1 . . H C7 .3911(2) .52959(18) .40717(13) .0385(4) Uani d . 1 . . C H7 .4797 .5260 .3719 .046 Uiso calc R 1 . . H C8 .4010(2) .64537(18) .46861(13) .0440(4) Uani d . 1 . . C H8A .4532 .6207 .5216 .053 Uiso calc R 1 . . H H8B .3042 .6697 .4864 .053 Uiso calc R 1 . . H C9 .4760(2) .76292(19) .42726(17) .0483(5) Uani d . 1 . . C H9A .5647 .7777 .4598 .058 Uiso calc R 1 . . H H9B .5030 .7408 .3671 .058 Uiso calc R 1 . . H C10 .3930(2) .88970(19) .42385(15) .0458(5) Uani d . 1 . . C C11 .3721(2) .39996(18) .45337(14) .0443(4) Uani d . 1 . . C H11 .2932 .4075 .4962 .053 Uiso calc R 1 . . H C12 .3218(3) .3185(2) .37812(17) .0544(5) Uani d . 1 . . C C13 .5020(3) .3444(2) .50059(17) .0568(6) Uani d . 1 . . C H13A .4764 .2638 .5268 .085 Uiso calc R 1 . . H H13B .5331 .4023 .5461 .085 Uiso calc R 1 . . H H13C .5788 .3318 .4588 .085 Uiso calc R 1 . . H C14 .3308(3) .9239(2) .51443(16) .0559(5) Uani d . 1 . . C H14A .4050 .9172 .5585 .084 Uiso calc R 1 . . H H14B .2537 .8660 .5286 .084 Uiso calc R 1 . . H H14C .2944 1.0098 .5131 .084 Uiso calc R 1 . . H C15 .0085(3) .6876(3) .26291(16) .0577(6) Uani d . 1 . . C H15A -.0102 .6162 .3012 .087 Uiso calc R 1 . . H H15B -.0129 .6643 .2028 .087 Uiso calc R 1 . . H H15C -.0511 .7585 .2802 .087 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0715(10) .0304(7) .0735(10) -.0018(7) -.0253(8) -.0044(7) O2 .0971(14) .0308(8) .1149(17) .0011(8) -.0369(13) .0002(9) O3 .0477(7) .0342(6) .0419(7) -.0009(5) .0015(5) .0019(5) O4 .0746(11) .0612(10) .0484(9) .0130(8) -.0114(8) -.0124(8) O5 .0526(9) .0334(7) .1056(14) -.0063(7) .0076(9) .0059(8) C1 .0526(10) .0291(8) .0528(11) .0048(8) .0053(9) .0040(8) C2 .0815(16) .0440(11) .0575(13) -.0012(11) .0160(12) .0131(10) C3 .0792(16) .0485(12) .0466(11) .0099(11) .0054(11) .0134(9) C4 .0507(10) .0430(10) .0372(9) .0076(9) -.0007(8) .0035(8) C5 .0489(10) .0395(9) .0413(9) .0042(8) -.0027(8) -.0017(8) C6 .0462(10) .0287(8) .0519(10) -.0002(7) -.0058(8) -.0013(8) C7 .0426(9) .0296(8) .0433(9) .0011(7) -.0013(7) .0036(7) C8 .0502(10) .0351(9) .0468(10) .0001(8) -.0055(8) .0002(8) C9 .0406(9) .0334(9) .0710(13) .0011(8) -.0032(9) -.0012(9) C10 .0434(10) .0289(9) .0650(12) -.0009(7) .0018(9) .0013(9) C11 .0480(10) .0323(9) .0527(11) .0002(8) .0001(8) .0083(8) C12 .0567(12) .0332(10) .0732(14) -.0024(8) -.0126(11) .0050(9) C13 .0640(13) .0438(11) .0625(13) .0024(11) -.0102(11) .0133(10) C14 .0604(13) .0442(11) .0630(13) .0041(10) -.0052(10) -.0096(10) C15 .0507(11) .0700(15) .0525(12) .0081(11) -.0086(10) .0035(11) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C12 . 1.346(3) ? O1 C6 . 1.465(2) ? O2 C12 . 1.203(3) ? O3 C1 . 1.439(2) ? O3 C4 . 1.450(2) ? O4 C5 . 1.413(2) ? O4 H4O . .90(4) ? O5 C10 . 1.449(2) ? O5 H5O . .92(4) ? C1 C2 . 1.523(3) ? C1 C10 . 1.534(3) ? C1 H1 . .9800 ? C2 C3 . 1.511(4) ? C2 H2A . .9700 ? C2 H2B . .9700 ? C3 C4 . 1.522(3) ? C3 H3A . .9700 ? C3 H3B . .9700 ? C4 C15 . 1.514(3) ? C4 C5 . 1.539(3) ? C5 C6 . 1.548(3) ? C5 H5 . .9800 ? C6 C7 . 1.535(3) ? C6 H6 . .9800 ? C7 C8 . 1.528(3) ? C7 C11 . 1.534(2) ? C7 H7 . .9800 ? C8 C9 . 1.544(3) ? C8 H8A . .9700 ? C8 H8B . .9700 ? C9 C10 . 1.534(3) ? C9 H9A . .9700 ? C9 H9B . .9700 ? C10 C14 . 1.526(3) ? C11 C12 . 1.495(3) ? C11 C13 . 1.515(3) ? C11 H11 . .9800 ? C13 H13A . .9600 ? C13 H13B . .9600 ? C13 H13C . .9600 ? C14 H14A . .9600 ? C14 H14B . .9600 ? C14 H14C . .9600 ? C15 H15A . .9600 ? C15 H15B . .9600 ? C15 H15C . .9600 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0181 .0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0492 .0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l -3 3 0 0 0 -5 6 6 1 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C12 O1 C6 109.11(16) C1 O3 C4 110.65(14) C5 O4 H4O 107(2) C10 O5 H5O 107(2) O3 C1 C2 105.84(17) O3 C1 C10 109.36(15) C2 C1 C10 116.6(2) O3 C1 H1 108.2 C2 C1 H1 108.2 C10 C1 H1 108.2 C3 C2 C1 102.71(19) C3 C2 H2A 111.2 C1 C2 H2A 111.2 C3 C2 H2B 111.2 C1 C2 H2B 111.2 H2A C2 H2B 109.1 C2 C3 C4 103.34(18) C2 C3 H3A 111.1 C4 C3 H3A 111.1 C2 C3 H3B 111.1 C4 C3 H3B 111.1 H3A C3 H3B 109.1 O3 C4 C15 108.58(17) O3 C4 C3 104.68(17) C15 C4 C3 113.16(19) O3 C4 C5 106.71(15) C15 C4 C5 112.40(19) C3 C4 C5 110.79(17) O4 C5 C4 107.00(17) O4 C5 C6 113.33(16) C4 C5 C6 110.16(16) O4 C5 H5 108.8 C4 C5 H5 108.8 C6 C5 H5 108.8 O1 C6 C7 102.93(15) O1 C6 C5 108.27(16) C7 C6 C5 118.07(16) O1 C6 H6 109.1 C7 C6 H6 109.1 C5 C6 H6 109.1 C8 C7 C11 115.53(16) C8 C7 C6 116.88(16) C11 C7 C6 99.78(15) C8 C7 H7 108.0 C11 C7 H7 108.0 C6 C7 H7 108.0 C7 C8 C9 114.36(18) C7 C8 H8A 108.7 C9 C8 H8A 108.7 C7 C8 H8B 108.7 C9 C8 H8B 108.7 H8A C8 H8B 107.6 C10 C9 C8 118.40(17) C10 C9 H9A 107.7 C8 C9 H9A 107.7 C10 C9 H9B 107.7 C8 C9 H9B 107.7 H9A C9 H9B 107.1 O5 C10 C14 108.36(18) O5 C10 C1 108.02(18) C14 C10 C1 110.57(18) O5 C10 C9 104.78(16) C14 C10 C9 111.21(19) C1 C10 C9 113.57(17) C12 C11 C13 112.78(18) C12 C11 C7 101.18(16) C13 C11 C7 117.50(17) C12 C11 H11 108.3 C13 C11 H11 108.3 C7 C11 H11 108.3 O2 C12 O1 120.3(2) O2 C12 C11 129.2(2) O1 C12 C11 110.44(17) C11 C13 H13A 109.5 C11 C13 H13B 109.5 H13A C13 H13B 109.5 C11 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 C10 C14 H14A 109.5 C10 C14 H14B 109.5 H14A C14 H14B 109.5 C10 C14 H14C 109.5 H14A C14 H14C 109.5 H14B C14 H14C 109.5 C4 C15 H15A 109.5 C4 C15 H15B 109.5 H15A C15 H15B 109.5 C4 C15 H15C 109.5 H15A C15 H15C 109.5 H15B C15 H15C 109.5 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O4 H4O O5 4_645 .90(4) 2.06(4) 2.895(3) 154(3) O5 H5O O2 1_565 .92(4) 1.94(4) 2.821(2) 160(3) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C4 O3 C1 C2 -9.1(2) yes C4 O3 C1 C10 -135.49(16) ? O3 C1 C2 C3 27.9(2) yes C10 C1 C2 C3 149.75(18) yes C1 C2 C3 C4 -35.5(2) yes C1 O3 C4 C15 -134.60(18) ? C1 O3 C4 C3 -13.5(2) yes C1 O3 C4 C5 104.03(17) ? C2 C3 C4 O3 30.6(2) yes C2 C3 C4 C15 148.6(2) ? C2 C3 C4 C5 -84.1(2) yes O3 C4 C5 O4 169.53(16) ? C15 C4 C5 O4 50.6(2) ? C3 C4 C5 O4 -77.1(2) ? O3 C4 C5 C6 45.9(2) ? C15 C4 C5 C6 -73.0(2) ? C3 C4 C5 C6 159.33(18) yes C12 O1 C6 C7 25.4(2) yes C12 O1 C6 C5 151.16(19) ? O4 C5 C6 O1 18.0(2) ? C4 C5 C6 O1 137.79(18) ? O4 C5 C6 C7 134.27(19) ? C4 C5 C6 C7 -105.9(2) yes O1 C6 C7 C8 -163.68(17) ? C5 C6 C7 C8 77.2(2) yes O1 C6 C7 C11 -38.4(2) yes C5 C6 C7 C11 -157.55(16) ? C11 C7 C8 C9 157.72(17) ? C6 C7 C8 C9 -85.3(2) yes C7 C8 C9 C10 123.2(2) yes O3 C1 C10 O5 162.79(15) ? C2 C1 C10 O5 42.8(2) ? O3 C1 C10 C14 -78.8(2) ? C2 C1 C10 C14 161.21(19) ? O3 C1 C10 C9 47.0(2) ? C2 C1 C10 C9 -73.0(2) yes C8 C9 C10 O5 167.66(19) ? C8 C9 C10 C14 50.8(3) ? C8 C9 C10 C1 -74.7(3) yes C8 C7 C11 C12 163.36(17) ? C6 C7 C11 C12 37.16(19) yes C8 C7 C11 C13 -73.4(2) ? C6 C7 C11 C13 160.37(19) ? C6 O1 C12 O2 -179.0(3) ? C6 O1 C12 C11 -.7(3) yes C13 C11 C12 O2 27.5(4) ? C7 C11 C12 O2 153.9(3) ? C13 C11 C12 O1 -150.6(2) ? C7 C11 C12 O1 -24.2(2) yes _cod_database_fobs_code 2200162