#------------------------------------------------------------------------------ #$Date: 2013-08-29 18:37:19 +0300 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/20/02/2200250.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200250 loop_ _publ_author_name 'Yamamoto, Emi' 'Kubo, Kanji' 'Kato, Nobuo' 'Mori, Akira' _publ_section_title ; 2-Amino-5-hexyloxytropone ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o279 _journal_page_last o281 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C13 H19 N O2' _chemical_formula_moiety 'C13 H19 N O2' _chemical_formula_sum 'C13 H19 N O2' _chemical_formula_weight 221.29 _chemical_name_systematic ; 2-Amino-5-hexyloxytropone ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yab' _symmetry_space_group_name_H-M 'P 1 21/a 1' _cell_angle_alpha 90.00 _cell_angle_beta 104.9458(12) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.7540(4) _cell_length_b 13.9616(5) _cell_length_c 8.9464(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 18.2 _cell_measurement_theta_min 10.7 _cell_volume 1297.80(9) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'MolEN (Fair, 1990)' _computing_molecular_graphics 'Xtal_GX (Hall & du Boulay, 1995)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR97 (Altomare et al., 1999)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full .000 _diffrn_measured_fraction_theta_max .998 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .019 _diffrn_reflns_av_sigmaI/netI .056 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 3274 _diffrn_reflns_theta_full 28.0 _diffrn_reflns_theta_max 28.0 _diffrn_reflns_theta_min 2.77 _diffrn_standards_decay_% 3.1 _diffrn_standards_interval_time 120 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .08 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min .987 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.133 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 480 _exptl_crystal_size_max .40 _exptl_crystal_size_mid .37 _exptl_crystal_size_min .17 _refine_diff_density_max .48 _refine_diff_density_min -.27 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.03 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 153 _refine_ls_number_reflns 3113 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.02 _refine_ls_R_factor_all .165 _refine_ls_R_factor_gt .071 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.1195P)^2^+0.2445P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .244 _reflns_number_gt 1461 _reflns_number_total 3113 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ya6011.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/a' _cod_database_code 2200250 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z' '-x, -y, -z' 'x-1/2, -y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 .6758(3) .2549(2) 1.0734(4) .0696(8) Uani d . 1 . . N O1 .90866(18) .22072(15) 1.0657(3) .0748(7) Uani d . 1 . . O O2 .6451(2) -.08804(15) .6873(3) .0768(7) Uani d . 1 . . O C1 .8277(2) .1644(2) .9862(3) .0562(7) Uani d . 1 . . C C2 .6924(2) .17955(19) .9878(3) .0517(7) Uani d . 1 . . C C3 .5876(2) .1245(2) .9134(3) .0621(8) Uani d . 1 . . C H3 .5096 .1462 .9271 .074 Uiso calc R 1 . . H C4 .5768(3) .0433(2) .8225(4) .0627(8) Uani d . 1 . . C H4 .4939 .0189 .7879 .075 Uiso calc R 1 . . H C5 .6701(3) -.0069(2) .7755(3) .0596(7) Uani d . 1 . . C C6 .8015(3) .0179(2) .8111(4) .0670(8) Uani d . 1 . . C H6 .8520 -.0218 .7674 .080 Uiso calc R 1 . . H C7 .8660(3) .0901(2) .8986(4) .0654(8) Uani d . 1 . . C H7 .9532 .0914 .9024 .079 Uiso calc R 1 . . H C8 .5158(3) -.1230(2) .6366(4) .0666(8) Uani d . 1 . . C H8A .4608 -.0751 .5741 .080 Uiso calc R 1 . . H H8B .4826 -.1376 .7251 .080 Uiso calc R 1 . . H C9 .5181(3) -.2115(2) .5434(4) .0788(10) Uani d . 1 . . C H9A .5518 -.1953 .4559 .095 Uiso calc R 1 . . H H9B .5767 -.2573 .6066 .095 Uiso calc R 1 . . H C10 .3908(4) -.2577(3) .4852(5) .0970(12) Uani d . 1 . . C H10A .3322 -.2129 .4197 .116 Uiso calc R 1 . . H H10B .3562 -.2736 .5720 .116 Uiso calc R 1 . . H C11 .3995(5) -.3487(4) .3933(6) .1266(17) Uani d . 1 . . C H11A .4273 -.3301 .3025 .152 Uiso calc R 1 . . H H11B .4670 -.3884 .4562 .152 Uiso calc R 1 . . H C12 .2905(6) -.4054(4) .3438(7) .151(2) Uani d . 1 . . C H12A .2236 -.3670 .2770 .182 Uiso calc R 1 . . H H12B .2606 -.4228 .4336 .182 Uiso calc R 1 . . H C13 .3053(5) -.4937(4) .2606(7) .143(2) Uani d . 1 . . C H13A .2244 -.5267 .2310 .215 Uiso calc R 1 . . H H13B .3684 -.5341 .3268 .215 Uiso calc R 1 . . H H13C .3330 -.4778 .1699 .215 Uiso calc R 1 . . H H1 .596(4) .268(2) 1.075(4) .084(10) Uiso d . 1 . . H H2 .741(4) .285(2) 1.124(4) .078(10) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 .0368(13) .0711(17) .100(2) -.0032(12) .0167(13) -.0172(15) O1 .0379(10) .0833(15) .1048(16) -.0130(10) .0213(11) -.0149(12) O2 .0557(12) .0769(14) .0984(16) -.0052(10) .0212(11) -.0224(12) C1 .0367(13) .0620(17) .0714(17) -.0038(12) .0167(12) .0066(14) C2 .0346(12) .0544(16) .0662(16) .0015(11) .0130(11) .0055(13) C3 .0328(12) .0688(19) .0841(19) .0034(12) .0142(12) -.0021(16) C4 .0365(13) .0683(18) .0814(19) -.0024(12) .0116(12) -.0046(16) C5 .0489(15) .0612(17) .0693(17) -.0011(13) .0165(13) -.0028(14) C6 .0456(15) .076(2) .084(2) .0038(14) .0261(14) -.0062(17) C7 .0365(13) .077(2) .088(2) -.0013(13) .0257(14) -.0048(17) C8 .0575(17) .0671(19) .0730(19) -.0061(14) .0127(14) -.0007(15) C9 .080(2) .075(2) .084(2) -.0099(17) .0251(18) -.0159(18) C10 .105(3) .097(3) .092(3) -.036(2) .030(2) -.026(2) C11 .124(4) .137(4) .127(4) -.045(3) .047(3) -.054(3) C12 .124(4) .163(5) .190(5) -.051(4) .082(4) -.087(4) C13 .118(4) .132(4) .190(5) -.029(3) .056(4) -.089(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.340(4) yes N1 H1 . .89(4) yes N1 H2 . .84(4) yes O1 C1 . 1.250(3) yes O2 C5 . 1.367(3) yes O2 C8 . 1.433(3) ? C1 C2 . 1.474(3) yes C1 C7 . 1.423(4) yes C2 C3 . 1.385(4) yes C3 C4 . 1.382(4) yes C3 H3 . .9300 ? C4 C5 . 1.376(4) yes C4 H4 . .9300 ? C5 C6 . 1.409(4) yes C6 C7 . 1.353(4) yes C6 H6 . .9300 ? C7 H7 . .9300 ? C8 C9 . 1.495(4) ? C8 H8A . .9700 ? C8 H8B . .9700 ? C9 C10 . 1.481(5) ? C9 H9A . .9700 ? C9 H9B . .9700 ? C10 C11 . 1.530(5) ? C10 H10A . .9700 ? C10 H10B . .9700 ? C11 C12 . 1.390(6) ? C11 H11A . .9700 ? C11 H11B . .9700 ? C12 C13 . 1.469(6) ? C12 H12A . .9700 ? C12 H12B . .9700 ? C13 H13A . .9600 ? C13 H13B . .9600 ? C13 H13C . .9600 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 H1 116(2) C2 N1 H2 119(2) H1 N1 H2 124(3) C5 O2 C8 119.7(2) O1 C1 C7 120.9(2) O1 C1 C2 116.6(3) C7 C1 C2 122.5(2) N1 C2 C3 120.0(2) N1 C2 C1 113.3(2) C3 C2 C1 126.7(3) C4 C3 C2 132.3(3) C4 C3 H3 113.9 C2 C3 H3 113.9 C5 C4 C3 129.8(3) C5 C4 H4 115.1 C3 C4 H4 115.1 O2 C5 C4 123.3(3) O2 C5 C6 111.7(2) C4 C5 C6 125.0(3) C7 C6 C5 130.4(3) C7 C6 H6 114.8 C5 C6 H6 114.8 C6 C7 C1 133.1(3) C6 C7 H7 113.4 C1 C7 H7 113.4 O2 C8 C9 107.7(3) O2 C8 H8A 110.2 C9 C8 H8A 110.2 O2 C8 H8B 110.2 C9 C8 H8B 110.2 H8A C8 H8B 108.5 C10 C9 C8 114.1(3) C10 C9 H9A 108.7 C8 C9 H9A 108.7 C10 C9 H9B 108.7 C8 C9 H9B 108.7 H9A C9 H9B 107.6 C9 C10 C11 111.8(4) C9 C10 H10A 109.3 C11 C10 H10A 109.3 C9 C10 H10B 109.3 C11 C10 H10B 109.3 H10A C10 H10B 107.9 C12 C11 C10 118.7(4) C12 C11 H11A 107.6 C10 C11 H11A 107.6 C12 C11 H11B 107.6 C10 C11 H11B 107.6 H11A C11 H11B 107.1 C11 C12 C13 116.5(5) C11 C12 H12A 108.2 C13 C12 H12A 108.2 C11 C12 H12B 108.2 C13 C12 H12B 108.2 H12A C12 H12B 107.3 C12 C13 H13A 109.5 C12 C13 H13B 109.5 H13A C13 H13B 109.5 C12 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O1 4_565 .89(4) 2.00(4) 2.877(4) 171.87 yes N1 H2 O2 2_657 .84(4) 2.54(3) 3.312(4) 154.38 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 C1 C2 N1 1.6(4) ? C7 C1 C2 N1 -178.0(3) ? O1 C1 C2 C3 -177.7(3) ? C7 C1 C2 C3 2.7(4) ? N1 C2 C3 C4 -178.3(3) ? C1 C2 C3 C4 .9(5) ? C2 C3 C4 C5 -1.5(6) ? C8 O2 C5 C4 1.5(4) ? C8 O2 C5 C6 -178.5(3) ? C3 C4 C5 O2 178.6(3) ? C3 C4 C5 C6 -1.4(5) ? O2 C5 C6 C7 -177.5(3) ? C4 C5 C6 C7 2.5(6) ? C5 C6 C7 C1 1.1(6) ? O1 C1 C7 C6 176.1(3) ? C2 C1 C7 C6 -4.3(5) ? C5 O2 C8 C9 180.0(3) yes O2 C8 C9 C10 178.7(3) yes C8 C9 C10 C11 -179.0(4) yes C9 C10 C11 C12 173.7(5) yes C10 C11 C12 C13 -178.0(5) yes _cod_database_fobs_code 2200250