#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2200267.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2200267 loop_ _publ_author_name 'Cho, Nam Sook' 'Hong, Soon Il' 'Kim, Jin-Gyu' 'Suh, Il-Hwan' _publ_section_title ; 1,5-[5,5'-(3-Oxa-1,5-pentylenedithio)bis(2,3-dihydro-2-oxo-1,3,4-thiadiazol-3-yl)]-3-oxapentane ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o434 _journal_page_last o435 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C12 H16 N4 O4 S4' _chemical_formula_moiety 'C12 H16 N4 O4 S4' _chemical_formula_sum 'C12 H16 N4 O4 S4' _chemical_formula_weight 408.53 _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 103.833(8) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.7369(8) _cell_length_b 15.741(3) _cell_length_c 13.3967(12) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13.7 _cell_measurement_theta_min 11.4 _cell_volume 1789.0(4) _computing_cell_refinement 'CAD-4 EXPRESS' _computing_data_collection 'CAD-4 EXPRESS (Enraf-Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .997 _diffrn_measured_fraction_theta_max .997 _diffrn_measurement_device_type 'Enraf Nonius CAD4' _diffrn_measurement_method 'non-profiled \w/2\q' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71069 _diffrn_reflns_av_R_equivalents .0256 _diffrn_reflns_av_sigmaI/netI .0318 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min -18 _diffrn_reflns_limit_l_max 0 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 3139 _diffrn_reflns_theta_full 24.97 _diffrn_reflns_theta_max 24.97 _diffrn_reflns_theta_min 2.59 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 300 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .556 _exptl_absorpt_correction_T_max .861 _exptl_absorpt_correction_T_min .745 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.517 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 848 _exptl_crystal_size_max .53 _exptl_crystal_size_mid .43 _exptl_crystal_size_min .26 _refine_diff_density_max .161 _refine_diff_density_min -.196 _refine_ls_extinction_coef .0028(6) _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.018 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 130 _refine_ls_number_reflns 1573 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.018 _refine_ls_R_factor_all .0521 _refine_ls_R_factor_gt .0351 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0409P)^2^+0.7080P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .0885 _reflns_number_gt 1201 _reflns_number_total 1573 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bt6031.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_original_cell_volume 1788.9(4) _cod_database_code 2200267 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol S1 .02169(9) .17999(5) .40152(5) .0665(3) Uani d . 1 . S S2 -.10009(10) .34446(5) .46857(6) .0777(3) Uani d . 1 . S N1 .1523(2) .15102(12) .58796(13) .0493(5) Uani d . 1 . N N2 .0813(2) .22914(11) .58945(14) .0509(5) Uani d . 1 . N O1 .0000 .10389(13) .7500 .0572(6) Uani d S 1 . O O2 .1839(2) .04098(12) .48204(14) .0735(5) Uani d . 1 . O O3 .0000 .44894(14) .7500 .0717(7) Uani d S 1 . O C1 .1209(3) .05431(15) .72579(19) .0631(7) Uani d . 1 . C H1A .0758 .0123 .6741 .076 Uiso calc R 1 . H H1B .1791 .0248 .7866 .076 Uiso calc R 1 . H C2 .2287(3) .11229(16) .68591(18) .0585(7) Uani d . 1 . C H2A .2657 .1567 .7360 .070 Uiso calc R 1 . H H2B .3198 .0803 .6777 .070 Uiso calc R 1 . H C3 .1338(3) .11066(16) .49686(18) .0529(6) Uani d . 1 . C C4 .0094(3) .25109(15) .49841(18) .0514(6) Uani d . 1 . C C5' -.0748(6) .3878(3) .6839(4) .0534(17) Uani d P .491(6) 1 C H5'A -.0539 .3294 .7062 .064 Uiso calc PR .491(6) 1 H H5'B -.1847 .3983 .6511 .064 Uiso calc PR .491(6) 1 H C5 -.1169(7) .3735(3) .5857(4) .0545(17) Uani d P .509(6) 2 C H5A -.2103 .4068 .5854 .065 Uiso calc PR .509(6) 2 H H5B -.1059 .3269 .6343 .065 Uiso calc PR .509(6) 2 H C6 .0284(11) .4232(6) .6411(6) .0555(18) Uani d P .491(6) 1 C H6A -.0094 .4613 .5836 .067 Uiso calc PR .491(6) 1 H H6B .1231 .3916 .6394 .067 Uiso calc PR .491(6) 1 H C6' -.0104(13) .4112(6) .5932(7) .063(2) Uani d P .509(6) 2 C H6'A .0858 .3907 .6391 .076 Uiso calc PR .509(6) 2 H H6'B -.0211 .4725 .5891 .076 Uiso calc PR .509(6) 2 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 .0779(5) .0815(5) .0381(4) -.0132(4) .0099(3) -.0048(3) S2 .0926(6) .0697(5) .0616(5) .0137(4) .0002(4) .0224(4) N1 .0549(12) .0526(11) .0406(10) .0094(9) .0120(9) -.0051(8) N2 .0632(12) .0485(11) .0411(11) .0082(10) .0126(9) .0008(9) O1 .0811(17) .0388(12) .0541(14) .000 .0206(12) .000 O2 .0798(13) .0742(12) .0709(12) .0070(10) .0270(10) -.0252(10) O3 .0890(19) .0428(13) .0758(18) .000 .0051(14) .000 C1 .0887(19) .0455(13) .0500(14) .0132(13) .0064(13) .0015(11) C2 .0636(16) .0573(15) .0491(14) .0180(12) .0028(12) -.0026(11) C3 .0502(14) .0637(16) .0482(13) -.0054(12) .0188(11) -.0098(12) C4 .0529(13) .0573(14) .0430(13) -.0060(11) .0094(10) .0054(11) C5' .058(3) .049(3) .056(4) -.002(2) .020(2) .001(2) C5 .052(3) .043(3) .065(4) .005(2) .008(3) .004(2) C6 .065(5) .041(3) .063(5) .000(3) .019(4) .001(4) C6' .087(7) .036(4) .070(6) .004(4) .025(5) .009(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S .1246 .1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C4 S1 C3 . . 88.89(11) y C5 S2 C4 . . 100.42(18) ? C5 S2 C6' . . 33.5(3) ? C4 S2 C6' . . 99.8(3) ? C3 N1 N2 . . 118.37(18) ? C3 N1 C2 . . 123.19(19) ? N2 N1 C2 . . 118.09(17) ? C4 N2 N1 . . 110.31(18) ? C1 O1 C1 2_556 . 112.9(3) ? C5' O3 C5' . 2_556 90.2(4) ? C5' O3 C6 . . 51.7(4) ? C5' O3 C6 2_556 . 105.1(4) ? C5' O3 C6 . 2_556 105.1(4) ? C5' O3 C6 2_556 2_556 51.7(4) ? C6 O3 C6 . 2_556 150.5(7) ? O1 C1 C2 . . 108.28(18) ? N1 C2 C1 . . 112.6(2) ? O2 C3 N1 . . 127.0(2) ? O2 C3 S1 . . 126.36(19) ? N1 C3 S1 . . 106.60(17) ? N2 C4 S1 . . 115.76(18) ? N2 C4 S2 . . 124.25(18) ? S1 C4 S2 . . 119.97(14) ? C6 C5' O3 . . 73.1(4) ? C6 C5' C5' . 2_556 90.9(5) ? O3 C5' C5' . 2_556 44.9(2) ? C6' C5 S2 . . 88.3(6) ? C5' C6 O3 . . 55.2(4) ? C5 C6' S2 . . 58.2(5) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag S1 C4 . 1.737(2) y S1 C3 . 1.784(3) y S2 C5 . 1.674(5) y S2 C4 . 1.747(3) y S2 C6' . 1.970(9) y N1 C3 . 1.351(3) ? N1 N2 . 1.380(2) ? N1 C2 . 1.456(3) ? N2 C4 . 1.279(3) y O1 C1 2_556 1.412(3) ? O1 C1 . 1.412(3) ? O2 C3 . 1.215(3) y O3 C5' . 1.365(5) ? O3 C5' 2_556 1.365(5) ? O3 C6 . 1.590(8) ? O3 C6 2_556 1.590(8) ? C1 C2 . 1.499(3) ? C5' C6 . 1.304(11) ? C5' C5' 2_556 1.934(11) ? C5 C6' . 1.088(11) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion C3 N1 N2 C4 . . -1.4(3) C2 N1 N2 C4 . . -174.9(2) C1 O1 C1 C2 2_556 . 171.4(2) C3 N1 C2 C1 . . -80.7(3) N2 N1 C2 C1 . . 92.4(2) O1 C1 C2 N1 . . -66.3(2) N2 N1 C3 O2 . . -177.7(2) C2 N1 C3 O2 . . -4.7(4) N2 N1 C3 S1 . . 2.6(2) C2 N1 C3 S1 . . 175.63(18) C4 S1 C3 O2 . . 178.1(2) C4 S1 C3 N1 . . -2.22(17) N1 N2 C4 S1 . . -.6(3) N1 N2 C4 S2 . . 177.96(16) C3 S1 C4 N2 . . 1.7(2) C3 S1 C4 S2 . . -176.91(15) C5 S2 C4 N2 . . -14.0(3) C6' S2 C4 N2 . . 20.1(4) C5 S2 C4 S1 . . 164.5(2) C6' S2 C4 S1 . . -161.4(3) C5' O3 C5' C6 2_556 . -109.2(5) C6 O3 C5' C6 2_556 . -159.3(5) C6 O3 C5' C5' . 2_556 109.2(5) C6 O3 C5' C5' 2_556 2_556 -50.1(4) C4 S2 C5 C6' . . 92.0(5) C5' C5' C6 O3 2_556 . -41.8(2) C5' O3 C6 C5' 2_556 . 78.0(6) C6 O3 C6 C5' 2_556 . 43.8(3) C4 S2 C6' C5 . . -94.2(5)