#------------------------------------------------------------------------------ #$Date: 2011-02-15 20:19:50 +0200 (Tue, 15 Feb 2011) $ #$Revision: 11574 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/4025769.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4025769 loop_ _publ_author_name 'Tyrone C. Casey' 'Julie Carlisle' 'Patrizia Tisselli' 'Louise Male' 'Neil Spencer' 'Richard S. Grainger' _publ_contact_author_address ; School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK. ; _publ_contact_author_email r.s.grainger@bham.ac.uk _publ_contact_author_fax '0121 414 4403' _publ_contact_author_name 'Richard S. Grainger' _publ_contact_author_phone '0121 414 4465' _publ_section_title ; Stereoselective \a,\a'-Annelation Reactions of 1,3-Dioxan-5-ones ; _journal_name_full 'Journal of Organic Chemistry' _journal_page_first 7461 _journal_page_last 7464 _journal_volume 75 _journal_year 2010 _chemical_formula_moiety 'C11 H16 O6' _chemical_formula_sum 'C11 H16 O6' _chemical_formula_weight 244.24 _chemical_name_systematic ; Methyl 3\b-Methoxy-3\a-methyl-9-oxo-2,4-dioxabicyclo[3.3.1]nonane- 7\b-carboxylate ; _space_group_IT_number 14 _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 96.097(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.9826(1) _cell_length_b 10.3401(2) _cell_length_c 18.4246(4) _cell_measurement_reflns_used 8106 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 2.91 _cell_volume 1133.31(4) _computing_cell_refinement 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' _computing_data_collection 'COLLECT (Hooft, R.W.W., 1998)' _computing_data_reduction 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 120(2) _diffrn_detector_area_resol_mean 9.091 _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker-Nonius Roper CCD camera on \k-goniostat' _diffrn_measurement_method '\f & \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Bruker-Nonius FR591 rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0402 _diffrn_reflns_av_sigmaI/netI 0.0341 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -23 _diffrn_reflns_number 14865 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 2.97 _exptl_absorpt_coefficient_mu 0.117 _exptl_absorpt_correction_T_max 0.9884 _exptl_absorpt_correction_T_min 0.9713 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_process_details 'SADABS 2007/2 (Sheldrick, G.M., 2007)' _exptl_crystal_colour Colourless _exptl_crystal_density_diffrn 1.431 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 520 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.490 _refine_diff_density_min -0.453 _refine_diff_density_rms 0.147 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.105 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 157 _refine_ls_number_reflns 2600 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.105 _refine_ls_R_factor_all 0.0528 _refine_ls_R_factor_gt 0.0427 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0538P)^2^+0.4132P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1093 _refine_ls_wR_factor_ref 0.1160 _reflns_number_gt 2150 _reflns_number_total 2600 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file jo101531b_si_005.cif _[local]_cod_data_source_block 12c _cod_database_code 4025769 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 0.2649(2) 0.59151(14) 0.22338(7) 0.0179(3) Uani 1 1 d . . . C2 C 0.3260(2) 0.45047(14) 0.23648(7) 0.0170(3) Uani 1 1 d . . . H2 H 0.4929 0.4399 0.2443 0.020 Uiso 1 1 calc R . . C3 C 0.2297(2) 0.37888(14) 0.16710(8) 0.0181(3) Uani 1 1 d . . . H3A H 0.2544 0.2848 0.1741 0.022 Uiso 1 1 calc R . . H3B H 0.3117 0.4067 0.1258 0.022 Uiso 1 1 calc R . . C4 C -0.0230(2) 0.40425(13) 0.14771(7) 0.0166(3) Uani 1 1 d . . . H4 H -0.1070 0.3551 0.1829 0.020 Uiso 1 1 calc R . . C5 C -0.0885(2) 0.54865(14) 0.15169(7) 0.0176(3) Uani 1 1 d . . . H5A H -0.0366 0.5952 0.1096 0.021 Uiso 1 1 calc R . . H5B H -0.2542 0.5562 0.1483 0.021 Uiso 1 1 calc R . . C6 C 0.0147(2) 0.61142(13) 0.22260(7) 0.0175(3) Uani 1 1 d . . . H6 H -0.0218 0.7058 0.2229 0.021 Uiso 1 1 calc R . . C7 C 0.0983(2) 0.49299(14) 0.33271(7) 0.0178(3) Uani 1 1 d . . . C8 C -0.0975(2) 0.35520(14) 0.07137(8) 0.0190(3) Uani 1 1 d . . . C9 C -0.4113(3) 0.33105(17) -0.01754(8) 0.0267(4) Uani 1 1 d . . . H9A H -0.3663 0.3966 -0.0516 0.040 Uiso 1 1 calc R . . H9B H -0.5758 0.3272 -0.0206 0.040 Uiso 1 1 calc R . . H9C H -0.3526 0.2465 -0.0303 0.040 Uiso 1 1 calc R . . C10 C 0.4423(3) 0.56494(18) 0.39935(11) 0.0389(5) Uani 1 1 d . . . H10A H 0.4083 0.5262 0.4455 0.058 Uiso 1 1 calc R . . H10B H 0.5341 0.6426 0.4095 0.058 Uiso 1 1 calc R . . H10C H 0.5250 0.5026 0.3724 0.058 Uiso 1 1 calc R . . C11 C -0.0079(3) 0.42608(16) 0.39311(8) 0.0243(3) Uani 1 1 d . . . H11A H -0.0737 0.4908 0.4234 0.037 Uiso 1 1 calc R . . H11B H 0.1068 0.3766 0.4232 0.037 Uiso 1 1 calc R . . H11C H -0.1260 0.3674 0.3720 0.037 Uiso 1 1 calc R . . O1 O 0.39198(18) 0.67169(10) 0.20234(6) 0.0253(3) Uani 1 1 d . . . O2 O 0.22321(16) 0.40026(9) 0.29832(5) 0.0182(2) Uani 1 1 d . . . O3 O -0.07158(16) 0.54672(10) 0.28367(5) 0.0186(2) Uani 1 1 d . . . O4 O 0.02470(18) 0.31644(13) 0.02799(6) 0.0323(3) Uani 1 1 d . . . O5 O -0.32166(16) 0.36483(10) 0.05612(5) 0.0209(2) Uani 1 1 d . . . O6 O 0.23761(17) 0.59902(10) 0.35671(5) 0.0206(2) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.0213(7) 0.0178(7) 0.0142(6) -0.0016(5) 0.0009(5) -0.0023(6) C2 0.0161(6) 0.0181(7) 0.0173(7) 0.0011(5) 0.0038(5) -0.0003(5) C3 0.0197(7) 0.0178(7) 0.0173(7) -0.0012(5) 0.0041(5) 0.0019(5) C4 0.0193(7) 0.0164(7) 0.0148(7) -0.0008(5) 0.0045(5) 0.0001(5) C5 0.0185(6) 0.0186(7) 0.0157(6) 0.0009(5) 0.0015(5) 0.0028(5) C6 0.0224(7) 0.0145(7) 0.0159(7) 0.0009(5) 0.0038(5) 0.0018(5) C7 0.0213(7) 0.0161(7) 0.0159(7) -0.0007(5) 0.0015(5) 0.0025(5) C8 0.0211(7) 0.0189(7) 0.0173(7) -0.0007(5) 0.0041(5) -0.0022(6) C9 0.0282(8) 0.0342(9) 0.0168(7) -0.0028(6) -0.0013(6) -0.0032(7) C10 0.0397(10) 0.0290(9) 0.0423(10) -0.0045(8) -0.0223(8) 0.0050(8) C11 0.0297(8) 0.0263(8) 0.0180(7) 0.0031(6) 0.0069(6) 0.0028(6) O1 0.0272(6) 0.0221(6) 0.0269(6) 0.0031(4) 0.0043(4) -0.0068(4) O2 0.0232(5) 0.0137(5) 0.0186(5) 0.0005(4) 0.0059(4) 0.0015(4) O3 0.0192(5) 0.0213(5) 0.0154(5) 0.0031(4) 0.0026(4) 0.0026(4) O4 0.0257(6) 0.0498(8) 0.0225(6) -0.0133(5) 0.0070(5) -0.0017(5) O5 0.0203(5) 0.0254(6) 0.0165(5) -0.0025(4) 0.0002(4) 0.0002(4) O6 0.0242(5) 0.0172(5) 0.0193(5) -0.0015(4) -0.0023(4) 0.0022(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O1 C1 C6 123.85(13) . . ? O1 C1 C2 123.94(13) . . ? C6 C1 C2 110.76(11) . . ? O2 C2 C1 110.79(11) . . ? O2 C2 C3 109.24(11) . . ? C1 C2 C3 105.57(11) . . ? O2 C2 H2 110.4 . . ? C1 C2 H2 110.4 . . ? C3 C2 H2 110.4 . . ? C2 C3 C4 112.55(11) . . ? C2 C3 H3A 109.1 . . ? C4 C3 H3A 109.1 . . ? C2 C3 H3B 109.1 . . ? C4 C3 H3B 109.1 . . ? H3A C3 H3B 107.8 . . ? C8 C4 C3 110.07(11) . . ? C8 C4 C5 108.40(11) . . ? C3 C4 C5 113.64(11) . . ? C8 C4 H4 108.2 . . ? C3 C4 H4 108.2 . . ? C5 C4 H4 108.2 . . ? C6 C5 C4 111.65(11) . . ? C6 C5 H5A 109.3 . . ? C4 C5 H5A 109.3 . . ? C6 C5 H5B 109.3 . . ? C4 C5 H5B 109.3 . . ? H5A C5 H5B 108.0 . . ? O3 C6 C1 111.34(11) . . ? O3 C6 C5 108.82(11) . . ? C1 C6 C5 105.08(11) . . ? O3 C6 H6 110.5 . . ? C1 C6 H6 110.5 . . ? C5 C6 H6 110.5 . . ? O3 C7 O2 111.31(11) . . ? O3 C7 O6 104.85(11) . . ? O2 C7 O6 110.15(11) . . ? O3 C7 C11 108.92(11) . . ? O2 C7 C11 107.79(12) . . ? O6 C7 C11 113.85(12) . . ? O4 C8 O5 123.15(13) . . ? O4 C8 C4 125.84(13) . . ? O5 C8 C4 110.96(11) . . ? O5 C9 H9A 109.5 . . ? O5 C9 H9B 109.5 . . ? H9A C9 H9B 109.5 . . ? O5 C9 H9C 109.5 . . ? H9A C9 H9C 109.5 . . ? H9B C9 H9C 109.5 . . ? O6 C10 H10A 109.5 . . ? O6 C10 H10B 109.5 . . ? H10A C10 H10B 109.5 . . ? O6 C10 H10C 109.5 . . ? H10A C10 H10C 109.5 . . ? H10B C10 H10C 109.5 . . ? C7 C11 H11A 109.5 . . ? C7 C11 H11B 109.5 . . ? H11A C11 H11B 109.5 . . ? C7 C11 H11C 109.5 . . ? H11A C11 H11C 109.5 . . ? H11B C11 H11C 109.5 . . ? C7 O2 C2 113.60(10) . . ? C7 O3 C6 112.94(10) . . ? C8 O5 C9 116.12(11) . . ? C7 O6 C10 114.95(11) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag C1 O1 1.2158(18) . ? C1 C6 1.510(2) . ? C1 C2 1.517(2) . ? C2 O2 1.4473(16) . ? C2 C3 1.5353(19) . ? C2 H2 1.0000 . ? C3 C4 1.5387(19) . ? C3 H3A 0.9900 . ? C3 H3B 0.9900 . ? C4 C8 1.5169(19) . ? C4 C5 1.5474(19) . ? C4 H4 1.0000 . ? C5 C6 1.5289(19) . ? C5 H5A 0.9900 . ? C5 H5B 0.9900 . ? C6 O3 1.4504(16) . ? C6 H6 1.0000 . ? C7 O3 1.4011(16) . ? C7 O2 1.4070(17) . ? C7 O6 1.4191(17) . ? C7 C11 1.507(2) . ? C8 O4 1.2077(18) . ? C8 O5 1.3441(17) . ? C9 O5 1.4481(17) . ? C9 H9A 0.9800 . ? C9 H9B 0.9800 . ? C9 H9C 0.9800 . ? C10 O6 1.4270(18) . ? C10 H10A 0.9800 . ? C10 H10B 0.9800 . ? C10 H10C 0.9800 . ? C11 H11A 0.9800 . ? C11 H11B 0.9800 . ? C11 H11C 0.9800 . ?