#------------------------------------------------------------------------------ #$Date: 2011-11-03 10:58:22 +0200 (Thu, 03 Nov 2011) $ #$Revision: 29461 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/4104437.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4104437 loop_ _publ_author_name 'Giuditta Guazzelli' 'Sara De Grazia' 'Karl D. Collins' 'Hiroshi Matsubara' 'Malcolm Spain' 'David J. Procter' _publ_section_title ; Selective Reductions of Cyclic 1,3-Diesters Using SmI2 and H2O ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 7214 _journal_page_last 7215 _journal_volume 131 _journal_year 2009 _chemical_formula_sum 'C11 H20 O3' _chemical_formula_weight 200.27 _space_group_IT_number 86 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall '-P 4bc' _symmetry_space_group_name_H-M 'P 42/n :2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 14.141(4) _cell_length_b 14.141(4) _cell_length_c 11.289(4) _cell_measurement_reflns_used 741 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 18.66 _cell_measurement_theta_min 2.31 _cell_volume 2257.4(12) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1037 _diffrn_reflns_av_sigmaI/netI 0.0631 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 13565 _diffrn_reflns_theta_full 23.24 _diffrn_reflns_theta_max 23.24 _diffrn_reflns_theta_min 2.04 _exptl_absorpt_coefficient_mu 0.084 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.178 _exptl_crystal_description rod _exptl_crystal_F_000 880 _exptl_crystal_size_max 0.45 _exptl_crystal_size_mid 0.15 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.701 _refine_diff_density_min -0.224 _refine_diff_density_rms 0.055 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.056 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 132 _refine_ls_number_reflns 1624 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.056 _refine_ls_R_factor_all 0.1013 _refine_ls_R_factor_gt 0.0701 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0984P)^2^+1.1767P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1745 _refine_ls_wR_factor_ref 0.1895 _reflns_number_gt 1182 _reflns_number_total 1624 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ja901715d_si_001.cif _[local]_cod_data_source_block s3147m _[local]_cod_cif_authors_sg_H-M 'P 42/n' _cod_original_cell_volume 2257.5(11) _cod_database_code 4104437 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y+1/2, z' '-y, x+1/2, z+1/2' 'y+1/2, -x, z+1/2' '-x, -y, -z' 'x-1/2, y-1/2, -z' 'y, -x-1/2, -z-1/2' '-y-1/2, x, -z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.18283(17) 0.84412(18) 0.1631(2) 0.0344(7) Uani 1 1 d . O2 O 0.13569(17) 0.69543(17) 0.1393(2) 0.0324(7) Uani 1 1 d . H2 H 0.1940 0.6851 0.1454 0.049 Uiso 1 1 calc R O3 O -0.12067(17) 0.76711(18) 0.2911(2) 0.0312(7) Uani 1 1 d . H3 H -0.1431 0.7168 0.2632 0.047 Uiso 1 1 calc R C1 C 0.0148(2) 0.8096(2) 0.1647(3) 0.0245(9) Uani 1 1 d . C2 C -0.0205(2) 0.7648(3) 0.2829(3) 0.0261(9) Uani 1 1 d . H2A H 0.0030 0.6984 0.2904 0.031 Uiso 1 1 calc R C3 C 0.0224(3) 0.8269(3) 0.3792(3) 0.0306(10) Uani 1 1 d . H3A H 0.0917 0.8127 0.3834 0.037 Uiso 1 1 calc R C4 C 0.0106(3) 0.9270(3) 0.3295(4) 0.0441(11) Uani 1 1 d . H4A H 0.0660 0.9665 0.3500 0.053 Uiso 1 1 calc R H4B H -0.0469 0.9571 0.3624 0.053 Uiso 1 1 calc R C5 C 0.0019(3) 0.9160(3) 0.1929(4) 0.0358(10) Uani 1 1 d . H5A H -0.0609 0.9381 0.1657 0.043 Uiso 1 1 calc R H5B H 0.0512 0.9538 0.1525 0.043 Uiso 1 1 calc R C6 C 0.1194(3) 0.7848(2) 0.1550(3) 0.0251(9) Uani 1 1 d . C7 C -0.0401(2) 0.7729(3) 0.0566(3) 0.0302(10) Uani 1 1 d . H7A H -0.1081 0.7704 0.0772 0.036 Uiso 1 1 calc R H7B H -0.0193 0.7074 0.0400 0.036 Uiso 1 1 calc R C8 C -0.0286(3) 0.8320(3) -0.0575(3) 0.0382(11) Uani 1 1 d . H8 H -0.0492 0.8982 -0.0401 0.046 Uiso 1 1 calc R C9 C 0.0712(3) 0.8353(3) -0.1060(4) 0.0497(12) Uani 1 1 d . H9A H 0.0947 0.7707 -0.1171 0.075 Uiso 1 1 calc R H9B H 0.1122 0.8689 -0.0501 0.075 Uiso 1 1 calc R H9C H 0.0713 0.8685 -0.1822 0.075 Uiso 1 1 calc R C10 C -0.0956(3) 0.7907(4) -0.1507(4) 0.0605(15) Uani 1 1 d . H10A H -0.0936 0.8298 -0.2223 0.091 Uiso 1 1 calc R H10B H -0.1602 0.7896 -0.1193 0.091 Uiso 1 1 calc R H10C H -0.0758 0.7261 -0.1702 0.091 Uiso 1 1 calc R C11 C -0.0194(3) 0.8107(3) 0.5015(4) 0.0377(10) Uani 1 1 d . H11A H -0.0871 0.8256 0.5001 0.057 Uiso 1 1 calc R H11B H 0.0125 0.8517 0.5590 0.057 Uiso 1 1 calc R H11C H -0.0106 0.7444 0.5243 0.057 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0213(14) 0.0263(15) 0.056(2) 0.0003(13) 0.0039(13) -0.0015(11) O2 0.0232(14) 0.0282(16) 0.0458(17) -0.0043(12) 0.0002(13) 0.0026(11) O3 0.0290(15) 0.0319(16) 0.0328(15) -0.0018(12) 0.0004(12) -0.0030(11) C1 0.0195(19) 0.0201(19) 0.034(2) 0.0010(17) 0.0029(16) 0.0019(15) C2 0.0142(19) 0.032(2) 0.032(2) 0.0002(18) -0.0001(16) 0.0017(16) C3 0.025(2) 0.033(2) 0.034(2) -0.0055(18) -0.0001(17) -0.0009(17) C4 0.046(3) 0.032(2) 0.055(3) -0.005(2) 0.014(2) -0.002(2) C5 0.027(2) 0.028(2) 0.052(3) 0.0043(19) 0.0066(19) 0.0006(17) C6 0.028(2) 0.020(2) 0.027(2) 0.0021(16) 0.0008(17) 0.0007(17) C7 0.018(2) 0.039(2) 0.034(2) 0.0021(19) 0.0057(17) 0.0033(17) C8 0.031(2) 0.057(3) 0.028(2) 0.007(2) 0.0068(18) 0.003(2) C9 0.052(3) 0.055(3) 0.043(3) 0.010(2) 0.009(2) -0.001(2) C10 0.052(3) 0.095(4) 0.034(3) 0.020(3) -0.009(2) -0.009(3) C11 0.036(2) 0.044(3) 0.034(2) -0.009(2) -0.0047(18) -0.001(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6 O2 H2 109.5 C2 O3 H3 109.5 C6 C1 C7 110.8(3) C6 C1 C5 110.6(3) C7 C1 C5 115.6(3) C6 C1 C2 106.2(3) C7 C1 C2 112.4(3) C5 C1 C2 100.4(3) O3 C2 C3 109.8(3) O3 C2 C1 111.4(3) C3 C2 C1 104.5(3) O3 C2 H2A 110.3 C3 C2 H2A 110.3 C1 C2 H2A 110.3 C11 C3 C2 114.0(3) C11 C3 C4 115.4(3) C2 C3 C4 103.1(3) C11 C3 H3A 108.0 C2 C3 H3A 108.0 C4 C3 H3A 108.0 C3 C4 C5 106.2(3) C3 C4 H4A 110.5 C5 C4 H4A 110.5 C3 C4 H4B 110.5 C5 C4 H4B 110.5 H4A C4 H4B 108.7 C1 C5 C4 107.0(3) C1 C5 H5A 110.3 C4 C5 H5A 110.3 C1 C5 H5B 110.3 C4 C5 H5B 110.3 H5A C5 H5B 108.6 O1 C6 O2 123.0(3) O1 C6 C1 123.0(3) O2 C6 C1 114.0(3) C1 C7 C8 115.2(3) C1 C7 H7A 108.5 C8 C7 H7A 108.5 C1 C7 H7B 108.5 C8 C7 H7B 108.5 H7A C7 H7B 107.5 C9 C8 C10 109.8(4) C9 C8 C7 114.6(3) C10 C8 C7 107.6(3) C9 C8 H8 108.2 C10 C8 H8 108.2 C7 C8 H8 108.2 C8 C9 H9A 109.5 C8 C9 H9B 109.5 H9A C9 H9B 109.5 C8 C9 H9C 109.5 H9A C9 H9C 109.5 H9B C9 H9C 109.5 C8 C10 H10A 109.5 C8 C10 H10B 109.5 H10A C10 H10B 109.5 C8 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 C3 C11 H11A 109.5 C3 C11 H11B 109.5 H11A C11 H11B 109.5 C3 C11 H11C 109.5 H11A C11 H11C 109.5 H11B C11 H11C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C6 1.231(4) O2 C6 1.297(4) O2 H2 0.8400 O3 C2 1.420(4) O3 H3 0.8400 C1 C6 1.525(5) C1 C7 1.536(5) C1 C5 1.549(5) C1 C2 1.559(5) C2 C3 1.523(5) C2 H2A 1.0000 C3 C11 1.519(5) C3 C4 1.532(6) C3 H3A 1.0000 C4 C5 1.555(6) C4 H4A 0.9900 C4 H4B 0.9900 C5 H5A 0.9900 C5 H5B 0.9900 C7 C8 1.544(5) C7 H7A 0.9900 C7 H7B 0.9900 C8 C9 1.515(6) C8 C10 1.531(6) C8 H8 1.0000 C9 H9A 0.9800 C9 H9B 0.9800 C9 H9C 0.9800 C10 H10A 0.9800 C10 H10B 0.9800 C10 H10C 0.9800 C11 H11A 0.9800 C11 H11B 0.9800 C11 H11C 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O2 H2 O1 0.84 1.80 2.640(3) 176.3 2_565 O3 H3 O3 0.84 1.96 2.769(4) 161.8 7_466 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 C1 C2 O3 -168.6(3) C7 C1 C2 O3 -47.3(4) C5 C1 C2 O3 76.2(3) C6 C1 C2 C3 72.9(3) C7 C1 C2 C3 -165.7(3) C5 C1 C2 C3 -42.3(3) O3 C2 C3 C11 47.4(4) C1 C2 C3 C11 167.0(3) O3 C2 C3 C4 -78.5(4) C1 C2 C3 C4 41.1(3) C11 C3 C4 C5 -148.0(3) C2 C3 C4 C5 -23.0(4) C6 C1 C5 C4 -84.5(4) C7 C1 C5 C4 148.5(3) C2 C1 C5 C4 27.3(4) C3 C4 C5 C1 -3.2(4) C7 C1 C6 O1 126.3(4) C5 C1 C6 O1 -3.3(5) C2 C1 C6 O1 -111.4(4) C7 C1 C6 O2 -54.8(4) C5 C1 C6 O2 175.6(3) C2 C1 C6 O2 67.5(4) C6 C1 C7 C8 -77.1(4) C5 C1 C7 C8 49.8(4) C2 C1 C7 C8 164.3(3) C1 C7 C8 C9 63.1(5) C1 C7 C8 C10 -174.4(3)