#------------------------------------------------------------------------------ #$Date: 2014-07-12 07:06:18 +0300 (Sat, 12 Jul 2014) $ #$Revision: 120112 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/01/54/7015485.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7015485 loop_ _publ_author_name 'Raja, Duraisamy Senthil' 'Paramaguru, Ganesan' 'Bhuvanesh, Nattamai S. P.' 'Reibenspies, Joseph H.' 'Renganathan, Rajalingam' 'Natarajan, Karuppannan' _publ_section_title ; Effect of terminal N-substitution in 2-oxo-1,2-dihydroquinoline-3-carbaldehyde thiosemicarbazones on the mode of coordination, structure, interaction with protein, radical scavenging and cytotoxic activity of copper(II) complexes. ; _journal_issue 17 _journal_name_full 'Dalton transactions (Cambridge, England : 2003)' _journal_page_first 4548 _journal_page_last 4559 _journal_volume 40 _journal_year 2011 _chemical_formula_sum 'C11 H13.8 Cl2 Cu N4 O2.9 S' _chemical_formula_weight 414.96 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 101.1650(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.4870(5) _cell_length_b 10.0729(4) _cell_length_c 12.6494(5) _cell_measurement_reflns_used 6476 _cell_measurement_temperature 110(2) _cell_measurement_theta_max 60.65 _cell_measurement_theta_min 4.55 _cell_volume 1560.93(11) _computing_cell_refinement ; CELL-NOW (Sheldrick, 2003) and SAINT (BRUKER-NONIUS, 2003) ; _computing_data_collection 'FRAMBO (BRUKER-NONIUS, 2003)' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'X-SEED (Barbour, 2001)' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 110(2) _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.989 _diffrn_measurement_device_type 'BRUKER GADDS D8 Discover' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.0311 _diffrn_reflns_av_sigmaI/netI 0.0205 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 11666 _diffrn_reflns_theta_full 60.78 _diffrn_reflns_theta_max 60.78 _diffrn_reflns_theta_min 4.55 _exptl_absorpt_coefficient_mu 6.532 _exptl_absorpt_correction_T_max 0.6577 _exptl_absorpt_correction_T_min 0.5078 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS; (Sheldrick, 2006)' _exptl_crystal_colour green _exptl_crystal_density_diffrn 1.766 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 840 _exptl_crystal_size_max 0.12 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.07 _refine_diff_density_max 0.745 _refine_diff_density_min -0.312 _refine_diff_density_rms 0.064 _refine_ls_extinction_coef 0.00041(11) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.060 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 200 _refine_ls_number_reflns 2340 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.060 _refine_ls_R_factor_all 0.0293 _refine_ls_R_factor_gt 0.0268 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0386P)^2^+1.5843P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0683 _refine_ls_wR_factor_ref 0.0694 _reflns_number_gt 2169 _reflns_number_total 2340 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c0dt01657h.txt _[local]_cod_data_source_block cuq1 _[local]_cod_cif_authors_sg_H-M P2(1)/n _[local]_cod_chemical_formula_sum_orig 'C11 H13.80 Cl2 Cu N4 O2.90 S' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1555 2011-01-17 13:19:09Z saulius ; _cod_database_code 7015485 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Cu1 Cu 0.15435(3) 0.48501(3) 0.34597(3) 0.01401(14) Uani 1 1 d . . . S1 S 0.12085(5) 0.61948(6) 0.47905(5) 0.01642(17) Uani 1 1 d . . . Cl1 Cl 0.37119(5) 0.50607(6) 0.36267(5) 0.01790(17) Uani 1 1 d . . . Cl2 Cl 0.16389(5) 0.30279(6) 0.45147(4) 0.01682(17) Uani 1 1 d . . . O1 O 0.13437(14) 0.37144(16) 0.21684(13) 0.0178(4) Uani 1 1 d . . . N1 N 0.13235(15) 0.64592(19) 0.25269(15) 0.0130(4) Uani 1 1 d . . . N2 N 0.12370(16) 0.76502(19) 0.30449(16) 0.0141(4) Uani 1 1 d . . . H2N H 0.1132 0.8383 0.2653 0.017 Uiso 1 1 d R . . N3 N 0.12995(16) 0.3073(2) 0.04663(16) 0.0150(4) Uani 1 1 d . . . H3N H 0.1370 0.2227 0.0726 0.018 Uiso 1 1 d R . . N4 N 0.09438(17) 0.8796(2) 0.45145(17) 0.0200(5) Uani 1 1 d . . . H4M H 0.0730 0.8782 0.5191 0.024 Uiso 1 1 d R . . H4N H 0.0598 0.9498 0.4076 0.024 Uiso 1 1 d R . . C1 C 0.13293(19) 0.6534(2) 0.15124(19) 0.0141(5) Uani 1 1 d . . . H1 H 0.1311 0.7391 0.1197 0.017 Uiso 1 1 calc R . . C2 C 0.13617(19) 0.5404(2) 0.08236(19) 0.0145(5) Uani 1 1 d . . . C3 C 0.13374(18) 0.4048(2) 0.12069(19) 0.0141(5) Uani 1 1 d . . . C4 C 0.13174(19) 0.3266(3) -0.06146(19) 0.0161(5) Uani 1 1 d . . . C5 C 0.13517(19) 0.4577(3) -0.0990(2) 0.0167(5) Uani 1 1 d . . . C6 C 0.13641(19) 0.5622(3) -0.02434(19) 0.0158(5) Uani 1 1 d . . . H6 H 0.1374 0.6512 -0.0492 0.019 Uiso 1 1 calc R . . C7 C 0.1312(2) 0.2191(3) -0.1312(2) 0.0201(6) Uani 1 1 d . . . H7 H 0.1282 0.1307 -0.1058 0.024 Uiso 1 1 calc R . . C8 C 0.1350(2) 0.2434(3) -0.2375(2) 0.0229(6) Uani 1 1 d . . . H8 H 0.1359 0.1706 -0.2850 0.028 Uiso 1 1 calc R . . C9 C 0.1375(2) 0.3727(3) -0.2772(2) 0.0236(6) Uani 1 1 d . . . H9 H 0.1393 0.3870 -0.3510 0.028 Uiso 1 1 calc R . . C10 C 0.1372(2) 0.4790(3) -0.2094(2) 0.0199(6) Uani 1 1 d . . . H10 H 0.1383 0.5669 -0.2364 0.024 Uiso 1 1 calc R . . C11 C 0.11159(19) 0.7637(2) 0.40735(19) 0.0155(5) Uani 1 1 d . . . O20W O 0.61022(17) 0.6272(2) 0.37575(17) 0.0301(5) Uani 0.90 1 d P . . H20 H 0.6754 0.6096 0.4275 0.045 Uiso 0.90 1 d PR . . H21 H 0.5466 0.5875 0.3940 0.045 Uiso 0.90 1 d PR . . O30W O 0.52368(15) 0.60822(17) 0.15438(14) 0.0246(4) Uani 1 1 d . . . H30 H 0.5654 0.6303 0.2239 0.037 Uiso 1 1 d R . . H31 H 0.4727 0.6801 0.1431 0.037 Uiso 1 1 d R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cu1 0.0194(2) 0.0118(2) 0.0108(2) 0.00023(14) 0.00286(15) 0.00091(14) S1 0.0216(3) 0.0158(3) 0.0121(3) -0.0005(2) 0.0040(2) 0.0019(2) Cl1 0.0185(3) 0.0139(3) 0.0219(3) -0.0024(2) 0.0054(2) -0.0008(2) Cl2 0.0219(3) 0.0152(3) 0.0137(3) 0.0027(2) 0.0043(2) 0.0011(2) O1 0.0275(10) 0.0128(8) 0.0124(9) 0.0000(7) 0.0019(7) -0.0010(7) N1 0.0135(10) 0.0113(10) 0.0135(10) -0.0030(8) 0.0012(8) -0.0001(8) N2 0.0190(11) 0.0095(10) 0.0133(10) 0.0003(8) 0.0016(8) 0.0012(8) N3 0.0192(11) 0.0121(10) 0.0127(10) -0.0010(9) 0.0008(8) 0.0021(8) N4 0.0265(12) 0.0157(11) 0.0181(11) -0.0030(9) 0.0050(9) 0.0042(9) C1 0.0146(12) 0.0125(12) 0.0150(12) 0.0005(10) 0.0023(9) -0.0018(10) C2 0.0120(12) 0.0153(13) 0.0159(12) 0.0000(10) 0.0021(9) -0.0009(10) C3 0.0112(12) 0.0165(13) 0.0138(13) -0.0011(10) 0.0005(9) -0.0001(10) C4 0.0114(12) 0.0210(13) 0.0148(12) -0.0021(11) -0.0001(9) 0.0014(10) C5 0.0130(12) 0.0210(14) 0.0160(13) 0.0007(11) 0.0026(10) 0.0003(11) C6 0.0158(12) 0.0144(12) 0.0169(12) -0.0002(10) 0.0023(10) -0.0019(10) C7 0.0195(13) 0.0200(13) 0.0188(13) -0.0042(11) -0.0011(11) 0.0039(11) C8 0.0199(14) 0.0289(15) 0.0190(14) -0.0086(12) 0.0014(11) 0.0031(12) C9 0.0210(14) 0.0362(16) 0.0138(13) -0.0029(12) 0.0036(10) 0.0001(12) C10 0.0212(14) 0.0245(14) 0.0141(13) 0.0015(11) 0.0041(10) -0.0017(11) C11 0.0110(12) 0.0182(13) 0.0167(13) -0.0030(11) 0.0012(10) -0.0010(10) O20W 0.0282(12) 0.0310(12) 0.0296(12) -0.0014(10) 0.0019(9) -0.0051(9) O30W 0.0327(11) 0.0203(9) 0.0203(10) -0.0002(8) 0.0041(8) 0.0018(8) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.3331 0.5567 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.3639 0.7018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu -1.9646 0.5888 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O1 Cu1 N1 90.03(7) . . ? O1 Cu1 Cl2 90.10(5) . . ? N1 Cu1 Cl2 175.13(6) . . ? O1 Cu1 S1 162.33(6) . . ? N1 Cu1 S1 85.96(6) . . ? Cl2 Cu1 S1 92.47(2) . . ? O1 Cu1 Cl1 94.30(5) . . ? N1 Cu1 Cl1 90.21(6) . . ? Cl2 Cu1 Cl1 94.63(2) . . ? S1 Cu1 Cl1 102.90(2) . . ? C11 S1 Cu1 96.75(8) . . ? C3 O1 Cu1 128.41(16) . . ? C1 N1 N2 116.0(2) . . ? C1 N1 Cu1 127.67(17) . . ? N2 N1 Cu1 116.11(14) . . ? C11 N2 N1 119.1(2) . . ? C11 N2 H2N 121.4 . . ? N1 N2 H2N 118.4 . . ? C3 N3 C4 125.2(2) . . ? C3 N3 H3N 116.2 . . ? C4 N3 H3N 117.9 . . ? C11 N4 H4M 117.6 . . ? C11 N4 H4N 120.1 . . ? H4M N4 H4N 111.4 . . ? N1 C1 C2 124.3(2) . . ? N1 C1 H1 117.8 . . ? C2 C1 H1 117.8 . . ? C6 C2 C1 118.4(2) . . ? C6 C2 C3 119.0(2) . . ? C1 C2 C3 122.5(2) . . ? O1 C3 N3 117.9(2) . . ? O1 C3 C2 125.2(2) . . ? N3 C3 C2 116.9(2) . . ? N3 C4 C7 121.0(2) . . ? N3 C4 C5 118.2(2) . . ? C7 C4 C5 120.8(2) . . ? C4 C5 C6 118.1(2) . . ? C4 C5 C10 118.8(2) . . ? C6 C5 C10 123.1(2) . . ? C2 C6 C5 122.5(2) . . ? C2 C6 H6 118.7 . . ? C5 C6 H6 118.7 . . ? C8 C7 C4 118.8(2) . . ? C8 C7 H7 120.6 . . ? C4 C7 H7 120.6 . . ? C7 C8 C9 121.6(2) . . ? C7 C8 H8 119.2 . . ? C9 C8 H8 119.2 . . ? C10 C9 C8 120.0(2) . . ? C10 C9 H9 120.0 . . ? C8 C9 H9 120.0 . . ? C9 C10 C5 120.0(2) . . ? C9 C10 H10 120.0 . . ? C5 C10 H10 120.0 . . ? N4 C11 N2 117.2(2) . . ? N4 C11 S1 121.68(18) . . ? N2 C11 S1 121.14(19) . . ? H20 O20W H21 113.1 . . ? H30 O30W H31 101.0 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Cu1 O1 1.9701(16) . ? Cu1 N1 1.992(2) . ? Cu1 Cl2 2.2589(7) . ? Cu1 S1 2.2618(7) . ? Cu1 Cl1 2.6832(7) . ? S1 C11 1.704(3) . ? O1 C3 1.260(3) . ? N1 C1 1.287(3) . ? N1 N2 1.381(3) . ? N2 C11 1.339(3) . ? N2 H2N 0.8847 . ? N3 C3 1.352(3) . ? N3 C4 1.386(3) . ? N3 H3N 0.9109 . ? N4 C11 1.330(3) . ? N4 H4M 0.9450 . ? N4 H4N 0.9489 . ? C1 C2 1.439(4) . ? C1 H1 0.9500 . ? C2 C6 1.368(3) . ? C2 C3 1.451(3) . ? C4 C7 1.397(4) . ? C4 C5 1.407(4) . ? C5 C6 1.412(4) . ? C5 C10 1.418(4) . ? C6 H6 0.9500 . ? C7 C8 1.376(4) . ? C7 H7 0.9500 . ? C8 C9 1.398(4) . ? C8 H8 0.9500 . ? C9 C10 1.372(4) . ? C9 H9 0.9500 . ? C10 H10 0.9500 . ? O20W H20 0.9570 . ? O20W H21 0.9569 . ? O30W H30 0.9570 . ? O30W H31 0.9571 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag O1 Cu1 S1 C11 -81.80(19) . . . . ? N1 Cu1 S1 C11 -4.52(10) . . . . ? Cl2 Cu1 S1 C11 -179.90(8) . . . . ? Cl1 Cu1 S1 C11 84.77(8) . . . . ? N1 Cu1 O1 C3 13.1(2) . . . . ? Cl2 Cu1 O1 C3 -171.79(19) . . . . ? S1 Cu1 O1 C3 89.7(3) . . . . ? Cl1 Cu1 O1 C3 -77.13(19) . . . . ? O1 Cu1 N1 C1 -13.7(2) . . . . ? Cl2 Cu1 N1 C1 -105.2(7) . . . . ? S1 Cu1 N1 C1 -176.4(2) . . . . ? Cl1 Cu1 N1 C1 80.64(19) . . . . ? O1 Cu1 N1 N2 171.69(15) . . . . ? Cl2 Cu1 N1 N2 80.2(7) . . . . ? S1 Cu1 N1 N2 8.91(14) . . . . ? Cl1 Cu1 N1 N2 -94.01(14) . . . . ? C1 N1 N2 C11 173.4(2) . . . . ? Cu1 N1 N2 C11 -11.4(3) . . . . ? N2 N1 C1 C2 -177.0(2) . . . . ? Cu1 N1 C1 C2 8.4(3) . . . . ? N1 C1 C2 C6 180.0(2) . . . . ? N1 C1 C2 C3 3.1(4) . . . . ? Cu1 O1 C3 N3 173.20(15) . . . . ? Cu1 O1 C3 C2 -7.1(3) . . . . ? C4 N3 C3 O1 -178.1(2) . . . . ? C4 N3 C3 C2 2.2(3) . . . . ? C6 C2 C3 O1 179.2(2) . . . . ? C1 C2 C3 O1 -3.9(4) . . . . ? C6 C2 C3 N3 -1.1(3) . . . . ? C1 C2 C3 N3 175.8(2) . . . . ? C3 N3 C4 C7 177.8(2) . . . . ? C3 N3 C4 C5 -1.6(3) . . . . ? N3 C4 C5 C6 -0.1(3) . . . . ? C7 C4 C5 C6 -179.5(2) . . . . ? N3 C4 C5 C10 179.9(2) . . . . ? C7 C4 C5 C10 0.5(4) . . . . ? C1 C2 C6 C5 -177.5(2) . . . . ? C3 C2 C6 C5 -0.5(3) . . . . ? C4 C5 C6 C2 1.1(4) . . . . ? C10 C5 C6 C2 -179.0(2) . . . . ? N3 C4 C7 C8 -178.9(2) . . . . ? C5 C4 C7 C8 0.5(4) . . . . ? C4 C7 C8 C9 -1.1(4) . . . . ? C7 C8 C9 C10 0.6(4) . . . . ? C8 C9 C10 C5 0.5(4) . . . . ? C4 C5 C10 C9 -1.0(4) . . . . ? C6 C5 C10 C9 179.0(2) . . . . ? N1 N2 C11 N4 -174.5(2) . . . . ? N1 N2 C11 S1 6.9(3) . . . . ? Cu1 S1 C11 N4 -178.28(19) . . . . ? Cu1 S1 C11 N2 0.3(2) . . . . ? _journal_paper_doi 10.1039/c0dt01657h