#------------------------------------------------------------------------------ #$Date: 2017-10-14 22:27:35 +0300 (Sat, 14 Oct 2017) $ #$Revision: 202017 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/15/17/7151742.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7151742 loop_ _publ_author_name 'Nesbitt, Caroline L.' 'McErlean, Christopher S. P.' _publ_section_title ; Total synthesis of C19 lipid diols containing a 2,5-disubstituted-3-oxygenated tetrahydrofuran. ; _journal_issue 7 _journal_name_full 'Organic & biomolecular chemistry' _journal_page_first 2198 _journal_page_last 2208 _journal_paper_doi 10.1039/c0ob00754d _journal_volume 9 _journal_year 2011 _chemical_absolute_configuration syn _chemical_formula_moiety 'C14 H16 O4' _chemical_formula_sum 'C14 H16 O4' _chemical_formula_weight 248.27 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_Int_Tables_number 19 _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.4822(4) _cell_length_b 8.8469(6) _cell_length_c 24.9538(17) _cell_measurement_reflns_used 9970 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 32.9315 _cell_measurement_theta_min 2.8225 _cell_volume 1210.27(15) _computing_cell_refinement 'SAINT Ver. 7.68A (Bruker-AXS, 2009)' _computing_data_collection 'APEX2 Ver. 2009.11-0 (Bruker-AXS, 2009)' _computing_data_reduction 'SAINT Ver. 7.68A' _computing_molecular_graphics ; X-Seed (Barbour, 2001), SHELXTL Ver. 6.14 (Bruker-AXS, 2003) ; _computing_publication_material 'modiCIFer-12162005 (Guzei, 2005)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 150(2) _diffrn_crystal_treatment ; attached with Exxon Paratone N, to a short length of fibre supported on a thin piece of copper wire inserted in a copper mounting pin. The crystal was quenched in a cold nitrogen gas stream from an Oxford Cryosystems Cryostream. ; _diffrn_measured_fraction_theta_full 0.984 _diffrn_measured_fraction_theta_max 0.984 _diffrn_measurement_device_type 'Bruker-Nonius FR591 Kappa APEX II' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0215 _diffrn_reflns_av_sigmaI/netI 0.0141 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 36 _diffrn_reflns_limit_l_min -38 _diffrn_reflns_number 18636 _diffrn_reflns_theta_full 32.93 _diffrn_reflns_theta_max 32.93 _diffrn_reflns_theta_min 3.27 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.099 _exptl_absorpt_correction_T_max 0.987 _exptl_absorpt_correction_T_min 0.927 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; SADABS Ver. 2008/1 (Bruker-AXS, 2008) ; _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.363 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 528 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.13 _refine_diff_density_max 0.320 _refine_diff_density_min -0.170 _refine_diff_density_rms 0.040 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.041 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 163 _refine_ls_number_reflns 2593 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.041 _refine_ls_R_factor_all 0.0334 _refine_ls_R_factor_gt 0.0321 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0613P)^2^+0.1036P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0895 _refine_ls_wR_factor_ref 0.0908 _reflns_number_gt 2485 _reflns_number_total 2593 _reflns_threshold_expression I>2\s(I) _cod_data_source_file c0ob00754d.txt _cod_data_source_block csm10pj1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1555 2011-01-17 13:19:09Z saulius ; _cod_original_sg_symbol_Hall 'P 2ac 2ab ' _cod_original_sg_symbol_H-M 'P 21 21 21 ' _cod_database_code 7151742 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group O1 O 0.0748(2) 0.15208(10) 0.37743(3) 0.0370(2) Uani 1 1 d . . . O2 O 0.02592(16) 0.34345(9) 0.32005(3) 0.02514(15) Uani 1 1 d . . . O3 O 0.46580(17) 0.29305(10) 0.25596(3) 0.02959(19) Uani 1 1 d . . . O4 O 0.55230(17) 0.24951(8) 0.13982(3) 0.02483(16) Uani 1 1 d . . . C1 C 0.1633(2) 0.25584(11) 0.35285(4) 0.0243(2) Uani 1 1 d . . . C2 C 0.4243(2) 0.31012(11) 0.35184(4) 0.02397(19) Uani 1 1 d . . . H2A H 0.5400 0.2242 0.3517 0.029 Uiso 1 1 calc R . . H2B H 0.4602 0.3762 0.3829 0.029 Uiso 1 1 calc R . . C3 C 0.4351(2) 0.39740(11) 0.29967(4) 0.02226(18) Uani 1 1 d . . . H3 H 0.5604 0.4795 0.3000 0.027 Uiso 1 1 calc R . . C4 C 0.1767(2) 0.45658(11) 0.29349(4) 0.02182(17) Uani 1 1 d . . . H4 H 0.1560 0.5594 0.3095 0.026 Uiso 1 1 calc R . . C5 C 0.1313(2) 0.45586(14) 0.23372(4) 0.0286(2) Uani 1 1 d . . . H5A H 0.1755 0.5543 0.2175 0.034 Uiso 1 1 calc R . . H5B H -0.0419 0.4338 0.2257 0.034 Uiso 1 1 calc R . . C6 C 0.2983(2) 0.32894(11) 0.21300(4) 0.02270(18) Uani 1 1 d . . . H6 H 0.1973 0.2378 0.2046 0.027 Uiso 1 1 calc R . . C7 C 0.4351(2) 0.37688(11) 0.16314(4) 0.02303(18) Uani 1 1 d . . . H7A H 0.3200 0.4218 0.1371 0.028 Uiso 1 1 calc R . . H7B H 0.5582 0.4543 0.1725 0.028 Uiso 1 1 calc R . . C8 C 0.7119(3) 0.29487(12) 0.09712(5) 0.0319(3) Uani 1 1 d . . . H8A H 0.8606 0.3422 0.1121 0.038 Uiso 1 1 calc R . . H8B H 0.6290 0.3700 0.0740 0.038 Uiso 1 1 calc R . . C9 C 0.7800(2) 0.15808(11) 0.06456(4) 0.02188(18) Uani 1 1 d . . . C10 C 0.6262(2) 0.10816(13) 0.02377(4) 0.0278(2) Uani 1 1 d . . . H10 H 0.4775 0.1600 0.0171 0.033 Uiso 1 1 calc R . . C11 C 0.6877(3) -0.01692(14) -0.00738(4) 0.0326(2) Uani 1 1 d . . . H11 H 0.5816 -0.0499 -0.0351 0.039 Uiso 1 1 calc R . . C12 C 0.9049(3) -0.09310(13) 0.00232(4) 0.0313(2) Uani 1 1 d . . . H12 H 0.9487 -0.1780 -0.0189 0.038 Uiso 1 1 calc R . . C13 C 1.0576(2) -0.04448(12) 0.04321(4) 0.0279(2) Uani 1 1 d . . . H13 H 1.2047 -0.0975 0.0503 0.033 Uiso 1 1 calc R . . C14 C 0.99667(19) 0.08156(11) 0.07392(4) 0.02332(18) Uani 1 1 d . . . H14 H 1.1039 0.1152 0.1014 0.028 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0481(6) 0.0305(4) 0.0325(4) 0.0034(3) 0.0095(4) -0.0038(4) O2 0.0200(3) 0.0312(3) 0.0242(3) -0.0008(3) 0.0007(3) 0.0000(3) O3 0.0307(4) 0.0373(4) 0.0207(3) -0.0019(3) -0.0013(3) 0.0176(4) O4 0.0302(4) 0.0213(3) 0.0229(3) 0.0025(2) 0.0081(3) 0.0015(3) C1 0.0293(5) 0.0239(4) 0.0198(3) -0.0035(3) 0.0020(4) 0.0016(4) C2 0.0252(5) 0.0255(4) 0.0212(4) -0.0027(3) -0.0045(3) 0.0047(4) C3 0.0186(4) 0.0227(4) 0.0256(4) -0.0006(3) -0.0013(3) 0.0029(4) C4 0.0198(4) 0.0225(4) 0.0232(4) -0.0006(3) 0.0006(3) 0.0049(3) C5 0.0259(5) 0.0373(5) 0.0225(4) 0.0031(4) 0.0009(4) 0.0136(5) C6 0.0213(4) 0.0262(4) 0.0206(3) 0.0020(3) 0.0012(3) 0.0028(4) C7 0.0250(5) 0.0212(4) 0.0230(4) 0.0020(3) 0.0031(4) 0.0025(4) C8 0.0383(6) 0.0221(4) 0.0353(5) 0.0030(4) 0.0175(5) -0.0003(4) C9 0.0228(4) 0.0218(4) 0.0210(3) 0.0049(3) 0.0055(3) -0.0004(3) C10 0.0214(4) 0.0334(5) 0.0286(4) 0.0108(4) -0.0028(4) -0.0003(4) C11 0.0333(6) 0.0407(6) 0.0237(4) 0.0011(4) -0.0062(4) -0.0103(5) C12 0.0358(6) 0.0291(4) 0.0290(4) -0.0057(4) 0.0058(4) -0.0048(5) C13 0.0221(5) 0.0280(4) 0.0334(5) 0.0013(4) 0.0025(4) 0.0024(4) C14 0.0205(4) 0.0276(4) 0.0219(3) 0.0011(3) -0.0013(3) -0.0024(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C1 O2 C4 110.61(9) . . ? C3 O3 C6 110.28(8) . . ? C7 O4 C8 110.96(7) . . ? O1 C1 O2 121.24(12) . . ? O1 C1 C2 129.21(11) . . ? O2 C1 C2 109.55(9) . . ? C1 C2 C3 102.34(8) . . ? C1 C2 H2A 111.3 . . ? C3 C2 H2A 111.3 . . ? C1 C2 H2B 111.3 . . ? C3 C2 H2B 111.3 . . ? H2A C2 H2B 109.2 . . ? O3 C3 C2 109.21(8) . . ? O3 C3 C4 104.68(8) . . ? C2 C3 C4 103.09(8) . . ? O3 C3 H3 113.0 . . ? C2 C3 H3 113.0 . . ? C4 C3 H3 113.0 . . ? O2 C4 C5 110.63(9) . . ? O2 C4 C3 104.26(7) . . ? C5 C4 C3 104.61(8) . . ? O2 C4 H4 112.3 . . ? C5 C4 H4 112.3 . . ? C3 C4 H4 112.3 . . ? C4 C5 C6 103.69(8) . . ? C4 C5 H5A 111.0 . . ? C6 C5 H5A 111.0 . . ? C4 C5 H5B 111.0 . . ? C6 C5 H5B 111.0 . . ? H5A C5 H5B 109.0 . . ? O3 C6 C7 110.85(9) . . ? O3 C6 C5 106.80(8) . . ? C7 C6 C5 111.51(8) . . ? O3 C6 H6 109.2 . . ? C7 C6 H6 109.2 . . ? C5 C6 H6 109.2 . . ? O4 C7 C6 109.78(8) . . ? O4 C7 H7A 109.7 . . ? C6 C7 H7A 109.7 . . ? O4 C7 H7B 109.7 . . ? C6 C7 H7B 109.7 . . ? H7A C7 H7B 108.2 . . ? O4 C8 C9 109.09(8) . . ? O4 C8 H8A 109.9 . . ? C9 C8 H8A 109.9 . . ? O4 C8 H8B 109.9 . . ? C9 C8 H8B 109.9 . . ? H8A C8 H8B 108.3 . . ? C14 C9 C10 119.12(9) . . ? C14 C9 C8 120.93(10) . . ? C10 C9 C8 119.95(11) . . ? C9 C10 C11 120.84(11) . . ? C9 C10 H10 119.6 . . ? C11 C10 H10 119.6 . . ? C12 C11 C10 119.69(11) . . ? C12 C11 H11 120.2 . . ? C10 C11 H11 120.2 . . ? C13 C12 C11 119.63(10) . . ? C13 C12 H12 120.2 . . ? C11 C12 H12 120.2 . . ? C12 C13 C14 120.51(11) . . ? C12 C13 H13 119.7 . . ? C14 C13 H13 119.7 . . ? C9 C14 C13 120.21(10) . . ? C9 C14 H14 119.9 . . ? C13 C14 H14 119.9 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag O1 C1 1.2061(13) . ? O2 C1 1.3557(13) . ? O2 C4 1.4574(13) . ? O3 C3 1.4389(12) . ? O3 C6 1.4468(12) . ? O4 C7 1.4219(12) . ? O4 C8 1.4359(13) . ? C1 C2 1.5095(17) . ? C2 C3 1.5148(14) . ? C2 H2A 0.9900 . ? C2 H2B 0.9900 . ? C3 C4 1.5183(15) . ? C3 H3 1.0000 . ? C4 C5 1.5122(14) . ? C4 H4 1.0000 . ? C5 C6 1.5383(15) . ? C5 H5A 0.9900 . ? C5 H5B 0.9900 . ? C6 C7 1.5133(13) . ? C6 H6 1.0000 . ? C7 H7A 0.9900 . ? C7 H7B 0.9900 . ? C8 C9 1.5047(15) . ? C8 H8A 0.9900 . ? C8 H8B 0.9900 . ? C9 C14 1.3872(15) . ? C9 C10 1.3934(15) . ? C10 C11 1.3938(17) . ? C10 H10 0.9500 . ? C11 C12 1.390(2) . ? C11 H11 0.9500 . ? C12 C13 1.3881(17) . ? C12 H12 0.9500 . ? C13 C14 1.3936(14) . ? C13 H13 0.9500 . ? C14 H14 0.9500 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C4 O2 C1 O1 -177.73(9) . . . . ? C4 O2 C1 C2 2.00(10) . . . . ? O1 C1 C2 C3 158.82(11) . . . . ? O2 C1 C2 C3 -20.89(10) . . . . ? C6 O3 C3 C2 133.49(9) . . . . ? C6 O3 C3 C4 23.67(10) . . . . ? C1 C2 C3 O3 -80.59(10) . . . . ? C1 C2 C3 C4 30.30(9) . . . . ? C1 O2 C4 C5 129.78(9) . . . . ? C1 O2 C4 C3 17.84(10) . . . . ? O3 C3 C4 O2 84.37(9) . . . . ? C2 C3 C4 O2 -29.85(9) . . . . ? O3 C3 C4 C5 -31.86(10) . . . . ? C2 C3 C4 C5 -146.07(9) . . . . ? O2 C4 C5 C6 -84.05(11) . . . . ? C3 C4 C5 C6 27.67(11) . . . . ? C3 O3 C6 C7 115.54(9) . . . . ? C3 O3 C6 C5 -6.11(11) . . . . ? C4 C5 C6 O3 -13.96(12) . . . . ? C4 C5 C6 C7 -135.20(10) . . . . ? C8 O4 C7 C6 -171.59(10) . . . . ? O3 C6 C7 O4 71.57(11) . . . . ? C5 C6 C7 O4 -169.58(9) . . . . ? C7 O4 C8 C9 -165.31(10) . . . . ? O4 C8 C9 C14 -96.54(13) . . . . ? O4 C8 C9 C10 84.49(12) . . . . ? C14 C9 C10 C11 0.02(15) . . . . ? C8 C9 C10 C11 179.01(10) . . . . ? C9 C10 C11 C12 0.08(16) . . . . ? C10 C11 C12 C13 0.48(17) . . . . ? C11 C12 C13 C14 -1.14(17) . . . . ? C10 C9 C14 C13 -0.68(14) . . . . ? C8 C9 C14 C13 -179.66(9) . . . . ? C12 C13 C14 C9 1.25(16) . . . . ? loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 9966203