#------------------------------------------------------------------------------
#$Date: 2019-11-08 02:56:26 +0200 (Fri, 08 Nov 2019) $
#$Revision: 224914 $
#$URL: file:///home/coder/svn-repositories/cod/cif/7/05/82/7058253.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_7058253
loop_
_publ_author_name
'Capozzi, Maria Annunziata M.'
'Alvarez-Larena, Angel'
'Piniella, Joan Francesc'
'Cardellicchio, Cosimo'
_publ_section_title
;
 Supramolecular synthons in fluorinated benzyl nitrophenyl sulfides
;
_journal_issue                   15
_journal_name_full               'New Journal of Chemistry'
_journal_page_first              5940
_journal_paper_doi               10.1039/C8NJ05350B
_journal_volume                  43
_journal_year                    2019
_chemical_formula_moiety         'C13 H6 F5 N O2 S'
_chemical_formula_sum            'C13 H6 F5 N O2 S'
_chemical_formula_weight         335.25
_chemical_name_systematic
;
4-nitrobenzyl 2,3,4,5,6-pentafluorophenyl sulfide
;
_space_group_crystal_system      orthorhombic
_space_group_IT_number           19
_space_group_name_Hall           'P 2ac 2ab'
_space_group_name_H-M_alt        'P 21 21 21'
_symmetry_space_group_name_Hall  'P 2ac 2ab'
_symmetry_space_group_name_H-M   'P 21 21 21'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_atom_sites_solution_secondary   direct
_audit_creation_method           SHELXL-2016/6
_audit_update_record
;
2017-10-30 deposited with the CCDC.    2019-03-18 downloaded from the CCDC.
;
_cell_angle_alpha                90
_cell_angle_beta                 90
_cell_angle_gamma                90
_cell_formula_units_Z            4
_cell_length_a                   5.0477(4)
_cell_length_b                   6.1732(5)
_cell_length_c                   41.665(3)
_cell_measurement_reflns_used    2203
_cell_measurement_temperature    296(2)
_cell_measurement_theta_max      22.46
_cell_measurement_theta_min      2.93
_cell_volume                     1298.30(17)
_computing_cell_refinement       'SAINT 5.0 (Bruker)'
_computing_data_collection       'SMART 5.6 (Bruker)'
_computing_data_reduction        'SAINT 5.0 (Bruker)'
_computing_structure_refinement  'SHELXL-2016/6 (Sheldrick, 2016)'
_computing_structure_solution    'SHELXTL-NT 6.1 (Bruker)'
_diffrn_ambient_temperature      296(2)
_diffrn_detector_area_resol_mean 8.13
_diffrn_measured_fraction_theta_full 0.999
_diffrn_measured_fraction_theta_max 0.964
_diffrn_measurement_device_type  'Bruker SMART-APEX diffractometer'
_diffrn_measurement_method       'φ and ω scans'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0384
_diffrn_reflns_av_unetI/netI     0.0414
_diffrn_reflns_Laue_measured_fraction_full 0.999
_diffrn_reflns_Laue_measured_fraction_max 0.964
_diffrn_reflns_limit_h_max       6
_diffrn_reflns_limit_h_min       -6
_diffrn_reflns_limit_k_max       8
_diffrn_reflns_limit_k_min       -8
_diffrn_reflns_limit_l_max       53
_diffrn_reflns_limit_l_min       -54
_diffrn_reflns_number            10392
_diffrn_reflns_point_group_measured_fraction_full 1.000
_diffrn_reflns_point_group_measured_fraction_max 0.941
_diffrn_reflns_theta_full        25.000
_diffrn_reflns_theta_max         28.726
_diffrn_reflns_theta_min         1.955
_diffrn_source                   'sealed X-ray tube'
_exptl_absorpt_coefficient_mu    0.317
_exptl_absorpt_correction_T_max  1
_exptl_absorpt_correction_T_min  0.908
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   'SADABS, 2.05'
_exptl_crystal_colour            colourless
_exptl_crystal_density_diffrn    1.715
_exptl_crystal_description       plate
_exptl_crystal_F_000             672
_exptl_crystal_size_max          0.640
_exptl_crystal_size_mid          0.250
_exptl_crystal_size_min          0.020
_refine_diff_density_max         0.299
_refine_diff_density_min         -0.260
_refine_diff_density_rms         0.042
_refine_ls_abs_structure_details
;
 Flack x determined using 648 quotients [(I+)-(I-)]/[(I+)+(I-)]
 (Parsons, Flack and Wagner, Acta Cryst. B69 (2013) 249-259).
;
_refine_ls_abs_structure_Flack   0.06(5)
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.026
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     199
_refine_ls_number_reflns         3149
_refine_ls_number_restraints     6
_refine_ls_restrained_S_all      1.026
_refine_ls_R_factor_all          0.0819
_refine_ls_R_factor_gt           0.0496
_refine_ls_shift/su_max          0.000
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0470P)²+0.2681P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1006
_refine_ls_wR_factor_ref         0.1122
_reflns_Friedel_coverage         0.622
_reflns_Friedel_fraction_full    1.000
_reflns_Friedel_fraction_max     0.905
_reflns_number_gt                2194
_reflns_number_total             3149
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            c8nj05350b2.cif
_cod_data_source_block           compound1
_cod_depositor_comments
'Adding full bibliography for 7058253--7058254.cif.'
_cod_database_code               7058253
_shelx_shelxl_version_number     2016/6
_shelx_space_group_comment
;
The symmetry employed for this shelxl refinement is uniquely defined
by the following loop, which should always be used as a source of
symmetry information in preference to the above space-group names.
They are only intended as comments.
;
_shelx_estimated_absorpt_t_min   0.823
_shelx_estimated_absorpt_t_max   0.994
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x+1/2, -y, z+1/2'
'-x, y+1/2, -z+1/2'
'x+1/2, -y+1/2, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
_atom_site_refinement_flags_adp
C1 C 0.6826(6) 0.0801(5) 0.16469(7) 0.0453(9) Uani 1 1 d D .
C2 C 0.5407(6) -0.1102(5) 0.16303(8) 0.0519(9) Uani 1 1 d D .
C3 C 0.3449(7) -0.1601(6) 0.18487(8) 0.0614(11) Uani 1 1 d D .
C4 C 0.2887(8) -0.0163(6) 0.20921(8) 0.0661(13) Uani 1 1 d D .
C5 C 0.4258(7) 0.1759(7) 0.21154(8) 0.0655(12) Uani 1 1 d D .
C6 C 0.6212(7) 0.2200(6) 0.18938(8) 0.0560(10) Uani 1 1 d D .
C7 C 0.7687(8) 0.2438(7) 0.10286(8) 0.0534(10) Uani 1 1 d . .
H7A H 0.687230 0.127034 0.090814 0.064 Uiso 1 1 calc R U
H7B H 0.631428 0.344530 0.109424 0.064 Uiso 1 1 calc R U
C8 C 0.9729(6) 0.3571(6) 0.08280(7) 0.0411(8) Uani 1 1 d . .
C9 C 1.0633(8) 0.5602(6) 0.09173(8) 0.0519(9) Uani 1 1 d . .
H9 H 0.991870 0.626625 0.109801 0.062 Uiso 1 1 calc R U
C10 C 1.2559(7) 0.6659(6) 0.07447(8) 0.0486(9) Uani 1 1 d . .
H10 H 1.315145 0.802334 0.080627 0.058 Uiso 1 1 calc R U
C11 C 1.3589(6) 0.5643(5) 0.04784(7) 0.0365(7) Uani 1 1 d . .
C12 C 1.2738(7) 0.3637(6) 0.03802(8) 0.0433(8) Uani 1 1 d . .
H12 H 1.345833 0.298199 0.019912 0.052 Uiso 1 1 calc R U
C13 C 1.0784(7) 0.2612(6) 0.05567(7) 0.0455(9) Uani 1 1 d . .
H13 H 1.017172 0.125939 0.049205 0.055 Uiso 1 1 calc R U
F2 F 0.5861(6) -0.2513(4) 0.13957(7) 0.0929(9) Uani 1 1 d . .
F3 F 0.2080(6) -0.3415(5) 0.18215(9) 0.1147(11) Uani 1 1 d . .
F4 F 0.0983(6) -0.0616(6) 0.23011(6) 0.1126(12) Uani 1 1 d . .
F5 F 0.3728(7) 0.3102(6) 0.23526(7) 0.1216(13) Uani 1 1 d . .
F6 F 0.7513(6) 0.4055(5) 0.19274(8) 0.1016(10) Uani 1 1 d . .
N1 N 1.5704(6) 0.6740(5) 0.02970(7) 0.0446(7) Uani 1 1 d . .
O1 O 1.6685(5) 0.5800(5) 0.00699(6) 0.0592(7) Uani 1 1 d . .
O2 O 1.6383(6) 0.8552(5) 0.03861(7) 0.0642(8) Uani 1 1 d . .
S1 S 0.9418(2) 0.1377(2) 0.13772(2) 0.0673(4) Uani 1 1 d . .
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C2 C1 C6 117.1(3)
C2 C1 S1 121.8(2)
C6 C1 S1 121.1(2)
F2 C2 C1 120.4(3)
F2 C2 C3 117.6(3)
C1 C2 C3 122.0(3)
F3 C3 C4 120.1(3)
F3 C3 C2 120.5(3)
C4 C3 C2 119.4(3)
F4 C4 C5 120.0(3)
F4 C4 C3 119.8(3)
C5 C4 C3 120.2(3)
F5 C5 C4 119.5(3)
F5 C5 C6 121.6(3)
C4 C5 C6 118.9(3)
F6 C6 C5 117.0(3)
F6 C6 C1 120.5(3)
C5 C6 C1 122.5(3)
C8 C7 S1 106.4(2)
C13 C8 C9 118.7(3)
C13 C8 C7 121.4(3)
C9 C8 C7 119.9(3)
C10 C9 C8 121.5(3)
C9 C10 C11 118.2(3)
C12 C11 C10 122.2(3)
C12 C11 N1 119.2(3)
C10 C11 N1 118.6(3)
C11 C12 C13 118.5(3)
C8 C13 C12 120.9(3)
O1 N1 O2 123.8(3)
O1 N1 C11 118.4(3)
O2 N1 C11 117.8(3)
C1 S1 C7 103.04(16)
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
C1 C2 1.3778(13)
C1 C6 1.3785(13)
C1 S1 1.761(3)
C2 F2 1.329(4)
C2 C3 1.3781(13)
C3 F3 1.321(4)
C3 C4 1.3774(13)
C4 F4 1.327(4)
C4 C5 1.3771(13)
C5 F5 1.317(4)
C5 C6 1.3780(13)
C6 F6 1.327(4)
C7 C8 1.500(5)
C7 S1 1.817(4)
C8 C13 1.383(5)
C8 C9 1.385(5)
C9 C10 1.374(5)
C10 C11 1.377(5)
C11 C12 1.373(5)
C11 N1 1.473(4)
C12 C13 1.384(5)
N1 O1 1.216(4)
N1 O2 1.228(4)
