#------------------------------------------------------------------------------
#$Date: 2019-11-17 15:20:46 +0200 (Sun, 17 Nov 2019) $
#$Revision: 230827 $
#$URL: file:///home/coder/svn-repositories/cod/cif/7/15/61/7156198.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_7156198
loop_
_publ_author_name
'García de la Concepción, Juan'
'Ávalos, Martín'
'Cintas, Pedro'
'Jiménez, José L'
'Light, Mark E.'
_publ_section_title
;
 Mechanistic studies of 1,3-dipolar cycloadditions of bicyclic
 thioisomünchnones with alkenes. A computational rationale focused on
 donor-acceptor interactions.
;
_journal_issue                   18
_journal_name_full               'Organic & biomolecular chemistry'
_journal_page_first              3438
_journal_page_last               3452
_journal_paper_doi               10.1039/c8ob00683k
_journal_volume                  16
_journal_year                    2018
_chemical_formula_moiety         'C19 H16 N2 O3 S2'
_chemical_formula_sum            'C19 H16 N2 O3 S2'
_chemical_formula_weight         384.46
_space_group_crystal_system      orthorhombic
_space_group_IT_number           61
_space_group_name_Hall           '-P 2ac 2ab'
_space_group_name_H-M_alt        'P b c a'
_symmetry_space_group_name_Hall  '-P 2ac 2ab'
_symmetry_space_group_name_H-M   'P b c a'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_audit_creation_date             2015-03-23
_audit_creation_method
;
Olex2 1.2-alpha
(compiled 2015.01.26 svn.r3150 for OlexSys, GUI svn.r4998)
;
_audit_update_record
;
2018-03-19 deposited with the CCDC.
2018-04-11 downloaded from the CCDC.
;
_cell_angle_alpha                90
_cell_angle_beta                 90
_cell_angle_gamma                90
_cell_formula_units_Z            8
_cell_length_a                   10.4140(3)
_cell_length_b                   15.8099(4)
_cell_length_c                   21.1096(5)
_cell_measurement_reflns_used    9202
_cell_measurement_temperature    100(2)
_cell_measurement_theta_max      30.7140
_cell_measurement_theta_min      2.5130
_cell_volume                     3475.58(16)
_computing_cell_refinement
'CrysAlisPro, Agilent Technologies, Version 1.171.37.31 (release 14-01-2014 CrysAlis171 .NET) (compiled Jan 14 2014,18:38:05)'
_computing_data_collection
'CrystalClear-SM Expert 3.1 b27 (Rigaku, 2013)'
_computing_data_reduction
'CrysAlisPro, Agilent Technologies, Version 1.171.37.31 (release 14-01-2014 CrysAlis171 .NET) (compiled Jan 14 2014,18:38:05)'
_computing_molecular_graphics    'Olex2 (Dolomanov et al., 2009)'
_computing_publication_material  'Olex2 (Dolomanov et al., 2009)'
_computing_structure_refinement  'ShelXL (Sheldrick, 2008)'
_computing_structure_solution    'ShelXT (Sheldrick, 2015)'
_diffrn_ambient_temperature      100(2)
_diffrn_detector                 'CCD area detector'
_diffrn_detector_area_resol_mean 28.5714
_diffrn_detector_type            'Rigaku HG Saturn724+ (2x2 bin mode)'
_diffrn_measured_fraction_theta_full 1.000
_diffrn_measured_fraction_theta_max 0.914
_diffrn_measurement_details
;
#__ type_ start__ end____ width___ exp.time_
  1 omega -109.00   71.00   1.0000   20.0000
omega____ theta____ kappa____ phi______ frames
    -      -19.0000    0.0000 -180.0000 180

#__ type_ start__ end____ width___ exp.time_
  2 omega   52.00   62.00   1.0000   20.0000
omega____ theta____ kappa____ phi______ frames
    -      -19.0000   72.0000 -120.0000 10

#__ type_ start__ end____ width___ exp.time_
  3 omega -109.00  -77.00   1.0000   20.0000
omega____ theta____ kappa____ phi______ frames
    -      -19.0000    0.0000  120.0000 32
;
_diffrn_measurement_device       'four-circle κ diffractometer'
_diffrn_measurement_device_type  'Rigaku AFC12 FRE-HF'
_diffrn_measurement_method       'profile data from ω-scans'
_diffrn_measurement_specimen_support 'MiTeGen MicroMesh'
_diffrn_orient_matrix_UB_11      -0.0550570000
_diffrn_orient_matrix_UB_12      0.0124904000
_diffrn_orient_matrix_UB_13      -0.0174137000
_diffrn_orient_matrix_UB_21      -0.0138859000
_diffrn_orient_matrix_UB_22      0.0311486000
_diffrn_orient_matrix_UB_23      0.0231854000
_diffrn_orient_matrix_UB_31      0.0376133000
_diffrn_orient_matrix_UB_32      0.0297811000
_diffrn_orient_matrix_UB_33      -0.0169723000
_diffrn_radiation_collimation    0.3
_diffrn_radiation_monochromator  'Confocal mirrors, HF Varimax'
_diffrn_radiation_probe          x-ray
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0401
_diffrn_reflns_av_unetI/netI     0.0369
_diffrn_reflns_Laue_measured_fraction_full 1.000
_diffrn_reflns_Laue_measured_fraction_max 0.914
_diffrn_reflns_limit_h_max       14
_diffrn_reflns_limit_h_min       -14
_diffrn_reflns_limit_k_max       22
_diffrn_reflns_limit_k_min       -22
_diffrn_reflns_limit_l_max       30
_diffrn_reflns_limit_l_min       -30
_diffrn_reflns_number            18670
_diffrn_reflns_point_group_measured_fraction_full 1.000
_diffrn_reflns_point_group_measured_fraction_max 0.914
_diffrn_reflns_theta_full        25.242
_diffrn_reflns_theta_max         30.811
_diffrn_reflns_theta_min         1.929
_diffrn_source                   'Rotating Anode'
_diffrn_source_current           55.0
_diffrn_source_power             2.475
_diffrn_source_target            Mo
_diffrn_source_type              'Rotating Anode'
_diffrn_source_voltage           45.0
_exptl_absorpt_coefficient_mu    0.329
_exptl_absorpt_correction_T_max  1.00000
_exptl_absorpt_correction_T_min  0.88687
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details
'CrysAlisPro, Agilent Technologies, Version 1.171.37.31 (release 14-01-2014 CrysAlis171 .NET) (compiled Jan 14 2014,18:38:05) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.'
_exptl_crystal_colour            'clear colourless'
_exptl_crystal_colour_lustre     clear
_exptl_crystal_colour_primary    colourless
_exptl_crystal_density_diffrn    1.469
_exptl_crystal_description       block
_exptl_crystal_F_000             1600
_exptl_crystal_size_max          0.12
_exptl_crystal_size_mid          0.09
_exptl_crystal_size_min          0.03
_refine_diff_density_max         0.424
_refine_diff_density_min         -0.293
_refine_diff_density_rms         0.067
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.032
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     235
_refine_ls_number_reflns         4978
_refine_ls_number_restraints     0
_refine_ls_restrained_S_all      1.032
_refine_ls_R_factor_all          0.0552
_refine_ls_R_factor_gt           0.0410
_refine_ls_shift/su_max          0.002
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0377P)²+2.5535P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.0886
_refine_ls_wR_factor_ref         0.0948
_reflns_Friedel_coverage         0.000
_reflns_number_gt                4044
_reflns_number_total             4978
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            c8ob00683k2.cif
_cod_data_source_block           2015acc0009_k_100k
_cod_depositor_comments
'Adding full bibliography for 7156195--7156203.cif.'
_cod_original_cell_volume        3475.57(15)
_cod_database_code               7156198
_shelx_space_group_comment
;
The symmetry employed for this shelxl refinement is uniquely defined
by the following loop, which should always be used as a source of
symmetry information in preference to the above space-group names.
They are only intended as comments.
;
_diffrn_measurement_device_type2 'Rigaku AFC12 (Right)'
_reflns_odcompleteness_completeness 91.53
_reflns_odcompleteness_iscentric 1
_reflns_odcompleteness_theta     30.74
_olex2_refinement_description
;
1. Fixed Uiso
 At 1.2 times of:
  All C(H) groups, All C(H,H) groups
2.a Ternary CH refined with riding coordinates:
 C6(H6), C7(H7)
2.b Secondary CH2 refined with riding coordinates:
 C1(H1A,H1B), C2(H2A,H2B)
2.c Aromatic/amide H refined with riding coordinates:
 C9(H9), C12(H12), C15(H15), C10(H10), C13(H13), C19(H19), C16(H16), C11(H11),
 C18(H18), C17(H17)
;
_shelx_shelxl_version_number     2014/7
_olex2_diffrn_ambient_temperature_device 'Oxford Cryosystems'
_olex2_exptl_crystal_mounting_method
'The crystal was mounted on a MITIGEN holder in perfluoroether oil'
_olex2_submission_original_sample_id caNO2
_olex2_submission_special_instructions 'No special instructions were received'
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x+1/2, -y, z+1/2'
'-x, y+1/2, -z+1/2'
'x+1/2, -y+1/2, -z'
'-x, -y, -z'
'x-1/2, y, -z-1/2'
'x, -y-1/2, z-1/2'
'-x-1/2, y-1/2, z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
S2 S 0.90568(4) 0.59671(2) 0.63319(2) 0.01573(9) Uani 1 1 d .
S1 S 1.03082(4) 0.44020(3) 0.69724(2) 0.01744(9) Uani 1 1 d .
O1 O 0.83354(11) 0.47085(7) 0.48882(5) 0.0179(2) Uani 1 1 d .
O3 O 0.76252(12) 0.35856(7) 0.74420(5) 0.0223(3) Uani 1 1 d .
O2 O 0.68558(13) 0.34058(7) 0.64957(6) 0.0258(3) Uani 1 1 d .
N1 N 0.90358(12) 0.44158(8) 0.59011(6) 0.0146(3) Uani 1 1 d .
N2 N 0.73209(13) 0.38467(8) 0.69148(6) 0.0171(3) Uani 1 1 d .
C8 C 0.72384(15) 0.62865(9) 0.53632(7) 0.0145(3) Uani 1 1 d .
C6 C 0.67582(14) 0.51687(9) 0.62647(7) 0.0142(3) Uani 1 1 d .
H6 H 0.6353 0.4706 0.6029 0.017 Uiso 1 1 calc R
C4 C 0.84129(14) 0.48700(9) 0.54496(7) 0.0145(3) Uani 1 1 d .
C14 C 0.56975(15) 0.57308(10) 0.65164(7) 0.0147(3) Uani 1 1 d .
C3 C 0.90110(15) 0.48318(10) 0.65179(7) 0.0146(3) Uani 1 1 d .
C7 C 0.76205(15) 0.47672(9) 0.67831(7) 0.0141(3) Uani 1 1 d .
H7 H 0.7552 0.5095 0.7176 0.017 Uiso 1 1 calc R
C9 C 0.78100(15) 0.70800(10) 0.53227(8) 0.0182(3) Uani 1 1 d .
H9 H 0.8479 0.7218 0.5596 0.022 Uiso 1 1 calc R
C5 C 0.77490(14) 0.56204(9) 0.58031(7) 0.0138(3) Uani 1 1 d .
C1 C 1.10813(15) 0.39790(11) 0.62605(7) 0.0190(3) Uani 1 1 d .
H1A H 1.1629 0.4402 0.6066 0.023 Uiso 1 1 calc R
H1B H 1.1597 0.3486 0.6363 0.023 Uiso 1 1 calc R
C12 C 0.58032(17) 0.66887(11) 0.45152(8) 0.0217(3) Uani 1 1 d .
H12 H 0.5124 0.6558 0.4246 0.026 Uiso 1 1 calc R
C15 C 0.59465(16) 0.64656(10) 0.68632(8) 0.0198(3) Uani 1 1 d .
H15 H 0.6790 0.6620 0.6949 0.024 Uiso 1 1 calc R
C10 C 0.73941(16) 0.76701(10) 0.48794(8) 0.0218(3) Uani 1 1 d .
H10 H 0.7788 0.8197 0.4855 0.026 Uiso 1 1 calc R
C13 C 0.62207(16) 0.60962(10) 0.49568(8) 0.0195(3) Uani 1 1 d .
H13 H 0.5820 0.5571 0.4981 0.023 Uiso 1 1 calc R
C2 C 0.99806(15) 0.37416(10) 0.58207(7) 0.0172(3) Uani 1 1 d .
H2A H 1.0272 0.3713 0.5385 0.021 Uiso 1 1 calc R
H2B H 0.9619 0.3198 0.5938 0.021 Uiso 1 1 calc R
C19 C 0.44265(16) 0.55119(11) 0.63983(8) 0.0204(3) Uani 1 1 d .
H19 H 0.4246 0.5021 0.6172 0.024 Uiso 1 1 calc R
C16 C 0.49439(17) 0.69665(11) 0.70807(8) 0.0232(4) Uani 1 1 d .
H16 H 0.5120 0.7453 0.7313 0.028 Uiso 1 1 calc R
C11 C 0.63935(17) 0.74723(11) 0.44739(8) 0.0223(3) Uani 1 1 d .
H11 H 0.6118 0.7864 0.4175 0.027 Uiso 1 1 calc R
C18 C 0.34170(17) 0.60182(12) 0.66137(9) 0.0256(4) Uani 1 1 d .
H18 H 0.2572 0.5866 0.6528 0.031 Uiso 1 1 calc R
C17 C 0.36767(18) 0.67452(11) 0.69537(8) 0.0230(4) Uani 1 1 d .
H17 H 0.3008 0.7085 0.7097 0.028 Uiso 1 1 calc R
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C3 S2 C5 79.62(7)
C3 S1 C1 91.75(7)
C4 N1 C3 112.30(12)
C4 N1 C2 128.76(12)
C3 N1 C2 116.40(12)
O3 N2 C7 115.86(13)
O2 N2 O3 124.36(14)
O2 N2 C7 119.70(12)
C9 C8 C5 121.26(14)
C9 C8 C13 118.77(14)
C13 C8 C5 119.85(14)
C14 C6 H6 107.6
C14 C6 C7 114.52(12)
C14 C6 C5 115.17(12)
C7 C6 H6 107.6
C7 C6 C5 103.92(12)
C5 C6 H6 107.6
O1 C4 N1 127.23(14)
O1 C4 C5 126.58(14)
N1 C4 C5 106.11(12)
C15 C14 C6 122.44(14)
C19 C14 C6 119.03(14)
C19 C14 C15 118.52(14)
S1 C3 S2 117.73(8)
N1 C3 S2 104.43(10)
N1 C3 S1 107.08(10)
N1 C3 C7 107.94(12)
C7 C3 S2 99.50(10)
C7 C3 S1 118.97(10)
N2 C7 C6 113.80(12)
N2 C7 C3 108.72(12)
N2 C7 H7 109.7
C6 C7 C3 104.96(11)
C6 C7 H7 109.7
C3 C7 H7 109.7
C8 C9 H9 119.6
C10 C9 C8 120.87(15)
C10 C9 H9 119.6
C8 C5 S2 115.30(11)
C8 C5 C6 117.69(12)
C8 C5 C4 113.19(12)
C6 C5 S2 104.01(9)
C4 C5 S2 100.83(10)
C4 C5 C6 103.83(11)
S1 C1 H1A 110.7
S1 C1 H1B 110.7
H1A C1 H1B 108.8
C2 C1 S1 105.04(10)
C2 C1 H1A 110.7
C2 C1 H1B 110.7
C13 C12 H12 119.8
C11 C12 H12 119.8
C11 C12 C13 120.36(16)
C14 C15 H15 119.7
C16 C15 C14 120.52(16)
C16 C15 H15 119.7
C9 C10 H10 120.0
C11 C10 C9 119.93(15)
C11 C10 H10 120.0
C8 C13 H13 119.9
C12 C13 C8 120.25(15)
C12 C13 H13 119.9
N1 C2 C1 104.86(12)
N1 C2 H2A 110.8
N1 C2 H2B 110.8
C1 C2 H2A 110.8
C1 C2 H2B 110.8
H2A C2 H2B 108.9
C14 C19 H19 119.5
C14 C19 C18 121.01(16)
C18 C19 H19 119.5
C15 C16 H16 119.8
C15 C16 C17 120.40(16)
C17 C16 H16 119.8
C12 C11 H11 120.1
C10 C11 C12 119.81(15)
C10 C11 H11 120.1
C19 C18 H18 120.1
C17 C18 C19 119.88(17)
C17 C18 H18 120.1
C16 C17 H17 120.2
C18 C17 C16 119.67(16)
C18 C17 H17 120.2
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
S2 C3 1.8380(16)
S2 C5 1.8443(15)
S1 C3 1.7909(16)
S1 C1 1.8314(16)
O1 C4 1.2149(18)
O3 N2 1.2286(17)
O2 N2 1.2260(17)
N1 C4 1.3584(19)
N1 C3 1.4589(19)
N1 C2 1.4605(19)
N2 C7 1.514(2)
C8 C9 1.391(2)
C8 C5 1.501(2)
C8 C13 1.396(2)
C6 H6 0.9800
C6 C14 1.514(2)
C6 C7 1.551(2)
C6 C5 1.589(2)
C4 C5 1.563(2)
C14 C15 1.397(2)
C14 C19 1.391(2)
C3 C7 1.556(2)
C7 H7 0.9800
C9 H9 0.9300
C9 C10 1.391(2)
C1 H1A 0.9700
C1 H1B 0.9700
C1 C2 1.522(2)
C12 H12 0.9300
C12 C13 1.391(2)
C12 C11 1.386(2)
C15 H15 0.9300
C15 C16 1.389(2)
C10 H10 0.9300
C10 C11 1.384(2)
C13 H13 0.9300
C2 H2A 0.9700
C2 H2B 0.9700
C19 H19 0.9300
C19 C18 1.397(2)
C16 H16 0.9300
C16 C17 1.391(3)
C11 H11 0.9300
C18 H18 0.9300
C18 C17 1.382(3)
C17 H17 0.9300
