Crystallography Open Database

Information card for entry 7108086

Preview

Coordinates	7108086.cif
Original paper (by DOI)	HTML

Structure parameters

Formula	C33 H43 N O12
Calculated formula	C33 H43 N O12
SMILES	O([C@@H]1[C@@]23[C@H]4[C@@H]([C@H](O)[C@H]([C@]56[C@]7(O)[C@H](OC5=O)[C@@H]5O[C@@H]([C@]7(OC5)O)C6)CC4)[C@@](OC3)(O)[C@@H](O)[C@@H]2C(CC1)(C)C)C(=O)C.n1ccccc1
Title of publication	Neoadenoloside A, a highly functionalized diterpene C-glycoside, from Isodon adenolomus
Authors of publication	Wei Zhao; Wei-Guang Wang; Xiao-Nian Li; Xue Du; Rui Zhan; Juan Zou; Yan Li; Hai-Bo Zhang; Fei He; Jian-Xin Pu; Han-Dong Sun
Journal of publication	Chem.Commun.
Year of publication	2012
Journal volume	48
Pages of publication	7723
a	11.6541 ± 0.0002 Å
b	11.6541 ± 0.0002 Å
c	43.9234 ± 0.0008 Å
α	90°
β	90°
γ	90°
Cell volume	5965.59 ± 0.18 Å³
Cell temperature	100 ± 2 K
Ambient diffraction temperature	100 ± 2 K
Number of distinct elements	4
Space group number	92
Hermann-Mauguin space group symbol	P 41 21 2
Hall space group symbol	P 4abw 2nw
Residual factor for all reflections	0.0279
Residual factor for significantly intense reflections	0.0279
Weighted residual factors for significantly intense reflections	0.0715
Weighted residual factors for all reflections included in the refinement	0.0715
Goodness-of-fit parameter for all reflections included in the refinement	1.07
Diffraction radiation wavelength	1.54178 Å
Diffraction radiation type	CuKα
Has coordinates	Yes
Has disorder	No
Has F_obs	No

Version history

Revision	Date	Message	Files
180184 (current)	2016-03-26	cif/7/10/ (antanas@kurmis) Replacing _[local]_cod_* tags with their equivalents from the COD CIF dictionary in multiple entries in subrange 7/10/80.	7108086.cif
106525	2014-03-15	cif/ (saulius@koala.ibt.lt) Adding DOIs to those Chem. Comm. structure descriptions that did not have it before and that could be matched unambiguously. Unambiguously means: a) journal name is "like 'Chem%Com%'" in SQl parlour b) first author's last name is the same in COD and in PubMed b) publication year and first page are the same in COD and in PubMed database. The commands to change these files where: awk '{print $1, $2}' outputs/join-dois.tab \ \| xargs -i sh -c ' CODID=$(echo {} \| awk "{print \$1}"); DOI=$(echo {} \| awk "{print \$2}"); CODFILE=$(echo $CODID \| codid2file); if ! grep -q _journal_paper_doi $CODFILE; then ( set -x; echo _journal_paper_doi $DOI >> $CODFILE ); else echo $CODID already has DOI; fi' Some files that did not had new-line at the end had to be fixed afterwards (in the ~/struct/cod/cif/7 directory, a COD working copy): svn st \ \| awk '{print $2}' \ \| xargs cifparse -q 2> /dev/null \ \| awk -F"'" '{print $2}' \ \| xargs perl -i -pe 's/_journal_paper_doi/\n_journal_paper_doi/' The working copy containing 'outputs/join-dois.tab' was: Path: /home/saulius/struct/xyz-extraction/dois/chem-comm-refetched-from-pubmed URL: svn+ssh://pitonas.ibt.lt/home/xray/svn-repositories/xyz-extraction/dois/chem-comm-refetched-from-pubmed Repository Root: svn+ssh://pitonas.ibt.lt/home/xray/svn-repositories/xyz-extraction Repository UUID: 9acf3947-1f02-0410-ae2a-984b57ad209b Revision: 2871 Node Kind: directory Schedule: normal Last Changed Author: saulius Last Changed Rev: 2871 Last Changed Date: 2014-03-15 11:18:46 +0200 (Sat, 15 Mar 2014) Three conflicts in files 10/81/7108128.cif, 10/81/7108130.cif and 10/99/7109903.cif were resolved manually.	7108086.cif
63757	2012-08-09	cif/ Adding structures of 7108086 via cif-deposit CGI script.	7108086.cif