#------------------------------------------------------------------------------ #$Date: 2016-02-14 16:26:36 +0200 (Sun, 14 Feb 2016) $ #$Revision: 176435 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/50/68/1506809.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1506809 loop_ _publ_author_name 'Nagashima, Hideaki' 'Inoue, Hidenari' 'Yoshioka, Naoki' _publ_section_title ; An Ideal One-Dimensional Antiferromagnetic Spin System Observed in Hydrogen-Bonded Naphth[2,3-d]imidazol-2-yl Nitronyl Nitroxide Crystal: The Role of the Hydrogen Bond. ; _journal_issue 20 _journal_name_full 'The journal of physical chemistry. B' _journal_page_first 6144 _journal_page_last 6151 _journal_paper_doi 10.1021/jp035849r _journal_volume 108 _journal_year 2004 _chemical_formula_moiety 'C18 H19 N4 O2 ' _chemical_formula_sum 'C18 H19 N4 O2' _chemical_formula_weight 323.37 _chemical_melting_point 502.5(5) _space_group_IT_number 29 _symmetry_cell_setting orthorhombic _symmetry_Int_Tables_number 29 _symmetry_space_group_name_Hall 'P 2c -2ac' _symmetry_space_group_name_H-M 'P c a 21' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 13.515(3) _cell_length_b 11.858(3) _cell_length_c 10.593(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 297.2 _cell_measurement_theta_max 12.0 _cell_measurement_theta_min 10.5 _cell_volume 1697.6(7) _computing_cell_refinement WinAFC _computing_data_collection WinAFC _computing_data_reduction 'teXsan Ver. 1.11' _computing_molecular_graphics ORTEP _computing_publication_material 'teXsan Ver. 1.11' _computing_structure_refinement SHELXL97 _computing_structure_solution SIR92 _diffrn_measurement_device_type 'Rigaku AFC7R' _diffrn_measurement_method \q-2\q _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0453 _diffrn_reflns_limit_h_max 18 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 7114 _diffrn_reflns_theta_max 32.5 _diffrn_reflns_theta_min 2.5 _diffrn_standards_decay_% 0.79 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.085 _exptl_absorpt_correction_T_max 0.983 _exptl_absorpt_correction_T_min 0.967 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(North, Phillips & Mathews, 1968)' _exptl_crystal_colour 'dark green' _exptl_crystal_density_diffrn 1.265 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_size_max 0.55 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.2 _refine_diff_density_max 0.14 _refine_diff_density_min -0.19 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.83 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 293 _refine_ls_number_reflns 3103 _refine_ls_R_factor_gt 0.041 _refine_ls_shift/su_max 0.0000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^) + (0.0275P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.082 _reflns_number_gt 1407 _reflns_number_total 3103 _reflns_threshold_expression >2.0sigma(I) _cod_data_source_file jp035849rsi20040223_111315.cif _cod_data_source_block NIm-NN(2004.2.4) _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value '502-503' was changed to '502.5(5)' - the average value was taken and precision was estimated. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1697.6(8) _cod_original_sg_symbol_H-M 'P c a 21 ' _cod_original_formula_sum 'C18 H19 N4 O2 ' _cod_database_code 1506809 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,1/2+z 1/2-x,y,1/2+z 1/2+x,-y,z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag O1 O 0.9059(1) 0.0868(2) 0.4043(2) 0.0505(5) Uani 1.00 d O2 O 0.7824(2) -0.0049(2) 0.0113(2) 0.0647(7) Uani 1.00 d N3 N 0.8837(2) 0.0323(2) 0.3051(2) 0.0354(5) Uani 1.00 d N4 N 0.8231(2) -0.0134(2) 0.1192(2) 0.0403(5) Uani 1.00 d N5 N 0.7321(2) 0.2126(2) 0.0934(2) 0.0322(5) Uani 1.00 d N6 N 0.7662(2) 0.2418(2) 0.2996(2) 0.0367(5) Uani 1.00 d C7 C 0.8273(2) 0.0675(2) 0.2079(2) 0.0314(5) Uani 1.00 d C8 C 0.9320(2) -0.0789(2) 0.2732(2) 0.0406(6) Uani 1.00 d C9 C 0.8604(2) -0.1236(2) 0.1714(3) 0.0430(7) Uani 1.00 d C10 C 0.9397(4) -0.1505(4) 0.3916(4) 0.078(1) Uani 1.00 d C11 C 1.0346(2) -0.0476(4) 0.2228(4) 0.0665(10) Uani 1.00 d C12 C 0.7695(3) -0.1833(3) 0.2255(4) 0.068(1) Uani 1.00 d C13 C 0.9065(3) -0.1922(3) 0.0666(4) 0.0592(10) Uani 1.00 d C14 C 0.7764(2) 0.1749(2) 0.2017(2) 0.0291(5) Uani 1.00 d C15 C 0.6880(2) 0.3148(2) 0.1239(2) 0.0298(5) Uani 1.00 d C16 C 0.7102(2) 0.3311(2) 0.2538(2) 0.0330(6) Uani 1.00 d C17 C 0.6760(2) 0.4259(2) 0.3151(3) 0.0440(7) Uani 1.00 d C18 C 0.6182(2) 0.5037(2) 0.2488(2) 0.0380(6) Uani 1.00 d C19 C 0.5953(2) 0.4848(2) 0.1182(2) 0.0353(6) Uani 1.00 d C20 C 0.6317(2) 0.3888(2) 0.0557(2) 0.0364(6) Uani 1.00 d C21 C 0.5791(2) 0.6017(2) 0.3081(3) 0.0502(8) Uani 1.00 d C22 C 0.5189(3) 0.6740(3) 0.2461(3) 0.0556(8) Uani 1.00 d C23 C 0.4947(3) 0.6546(3) 0.1191(3) 0.0555(8) Uani 1.00 d C24 C 0.5328(2) 0.5650(2) 0.0567(3) 0.0509(8) Uani 1.00 d H5 H 0.732(2) 0.182(2) 0.021(3) 0.0585(1) Uiso 1.00 d H10A H 0.998(3) -0.117(3) 0.449(4) 0.1204(2) Uiso 1.00 d H10B H 0.964(3) -0.228(4) 0.369(4) 0.1230(2) Uiso 1.00 d H10C H 0.871(3) -0.146(3) 0.435(4) 0.1183(2) Uiso 1.00 d H11A H 1.077(3) 0.003(4) 0.281(4) 0.1191(2) Uiso 1.00 d H11B H 1.028(4) 0.001(5) 0.137(5) 0.1738(3) Uiso 1.00 d H11C H 1.068(3) -0.119(3) 0.199(4) 0.1018(2) Uiso 1.00 d H12A H 0.735(2) -0.137(2) 0.305(3) 0.0722(1) Uiso 1.00 d H12B H 0.791(2) -0.263(2) 0.262(3) 0.0760(1) Uiso 1.00 d H12C H 0.727(3) -0.201(3) 0.150(4) 0.0913(2) Uiso 1.00 d H13A H 0.959(2) -0.144(2) 0.025(3) 0.0616(1) Uiso 1.00 d H13B H 0.849(3) -0.213(3) 0.000(4) 0.1196(2) Uiso 1.00 d H13C H 0.933(3) -0.252(3) 0.101(4) 0.0930(2) Uiso 1.00 d H17 H 0.689(2) 0.436(2) 0.402(3) 0.0541(1) Uiso 1.00 d H20 H 0.619(2) 0.374(2) -0.037(2) 0.04562(9) Uiso 1.00 d H21 H 0.596(2) 0.617(2) 0.399(3) 0.0792(1) Uiso 1.00 d H22 H 0.490(2) 0.744(2) 0.292(2) 0.0528(1) Uiso 1.00 d H23 H 0.451(2) 0.704(2) 0.077(3) 0.0796(1) Uiso 1.00 d H24 H 0.520(2) 0.545(2) -0.032(3) 0.0694(1) Uiso 1.00 d loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.059(1) 0.053(1) 0.038(1) 0.009(1) -0.012(1) -0.0081(10) O2 0.088(2) 0.059(1) 0.047(1) 0.025(1) -0.029(1) -0.021(1) N3 0.039(1) 0.038(1) 0.029(1) 0.004(1) 0.001(1) -0.003(1) N4 0.045(1) 0.040(1) 0.036(1) 0.011(1) -0.006(1) -0.009(1) N5 0.038(1) 0.034(1) 0.024(1) 0.0046(10) -0.0004(10) -0.0065(9) N6 0.045(1) 0.034(1) 0.031(1) 0.008(1) -0.007(1) -0.0067(10) C7 0.031(1) 0.036(1) 0.027(1) 0.002(1) 0.002(1) -0.005(1) C8 0.049(2) 0.039(1) 0.033(1) 0.016(1) 0.000(1) -0.002(1) C9 0.050(2) 0.035(1) 0.044(2) 0.012(1) 0.006(1) -0.006(1) C10 0.126(4) 0.053(2) 0.054(2) 0.035(3) -0.013(3) 0.012(2) C11 0.038(2) 0.083(2) 0.079(3) 0.015(2) -0.001(2) -0.020(2) C12 0.072(3) 0.050(2) 0.082(3) -0.013(2) 0.012(2) 0.000(2) C13 0.075(3) 0.046(2) 0.057(2) 0.021(2) 0.005(2) -0.014(2) C14 0.030(1) 0.028(1) 0.029(1) 0.000(1) -0.001(1) -0.004(1) C15 0.033(1) 0.029(1) 0.027(1) 0.001(1) 0.002(1) -0.004(1) C16 0.039(1) 0.032(1) 0.029(1) 0.002(1) -0.003(1) -0.005(1) C17 0.056(2) 0.045(2) 0.031(1) 0.011(1) -0.010(1) -0.016(1) C18 0.041(2) 0.033(1) 0.040(1) 0.006(1) 0.002(1) -0.005(1) C19 0.037(1) 0.033(1) 0.036(1) 0.002(1) 0.003(1) 0.005(1) C20 0.041(2) 0.042(1) 0.026(1) 0.005(1) -0.001(1) -0.001(1) C21 0.061(2) 0.037(1) 0.053(2) 0.011(1) 0.003(2) -0.015(1) C22 0.066(2) 0.036(2) 0.065(2) 0.012(2) 0.016(2) -0.002(2) C23 0.063(2) 0.045(2) 0.058(2) 0.018(2) 0.011(2) 0.015(2) C24 0.063(2) 0.043(2) 0.047(2) 0.013(2) 0.003(2) 0.009(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.003 0.002 ;International Tables for Crystallography (1992, Vol. C) ; H H 0.000 0.000 ;International Tables for Crystallography (1992, Vol. C) ; N N 0.006 0.003 ;International Tables for Crystallography (1992, Vol. C) ; O O 0.011 0.006 ;International Tables for Crystallography (1992, Vol. C) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 N3 C7 127.5(2) yes O1 N3 C8 121.8(2) yes C7 N3 C8 110.1(2) yes O2 N4 C7 126.2(2) yes O2 N4 C9 122.9(2) yes C7 N4 C9 110.4(2) yes C14 N5 C15 106.1(2) yes C14 N5 H5 128(2) no C15 N5 H5 126(2) no C14 N6 C16 104.0(2) yes N3 C7 N4 109.7(2) yes N3 C7 C14 125.1(2) yes N4 C7 C14 125.1(2) yes N3 C8 C9 100.7(2) yes N3 C8 C10 109.5(2) yes N3 C8 C11 105.0(2) yes C9 C8 C10 115.3(3) yes C9 C8 C11 114.0(3) yes C10 C8 C11 111.2(3) yes N4 C9 C8 99.7(2) yes N4 C9 C12 105.7(2) yes N4 C9 C13 109.6(2) yes C8 C9 C12 113.6(3) yes C8 C9 C13 116.1(3) yes C12 C9 C13 110.9(3) yes C8 C10 H10A 108(2) no C8 C10 H10B 110(2) no C8 C10 H10C 106(2) no H10A C10 H10B 104(3) no H10A C10 H10C 113(3) no H10B C10 H10C 116(3) no C8 C11 H11A 116(2) no C8 C11 H11B 111(3) no C8 C11 H11C 107(2) no H11A C11 H11B 104(4) no H11A C11 H11C 113(3) no H11B C11 H11C 106(4) no C9 C12 H12A 113(1) no C9 C12 H12B 109(2) no C9 C12 H12C 105(2) no H12A C12 H12B 106(2) no H12A C12 H12C 118(3) no H12B C12 H12C 105(3) no C9 C13 H13A 108(2) no C9 C13 H13B 108(2) no C9 C13 H13C 107(3) no H13A C13 H13B 110(3) no H13A C13 H13C 111(3) no H13B C13 H13C 113(3) no N5 C14 N6 114.8(2) yes N5 C14 C7 122.2(2) yes N6 C14 C7 123.0(2) yes N5 C15 C16 104.7(2) yes N5 C15 C20 132.5(2) yes C16 C15 C20 122.7(2) yes N6 C16 C15 110.4(2) yes N6 C16 C17 129.8(2) yes C15 C16 C17 119.8(2) yes C16 C17 C18 119.3(2) yes C16 C17 H17 120(1) no C18 C17 H17 121(1) no C17 C18 C19 120.1(2) yes C17 C18 C21 121.7(2) yes C19 C18 C21 118.2(2) yes C18 C19 C20 120.3(2) yes C18 C19 C24 117.6(2) yes C20 C19 C24 122.0(2) yes C15 C20 C19 117.7(2) yes C15 C20 H20 120(1) no C19 C20 H20 122(1) no C18 C21 C22 121.8(3) yes C18 C21 H21 119(2) no C22 C21 H21 119(2) no C21 C22 C23 120.1(3) yes C21 C22 H22 120(1) no C23 C22 H22 120(1) no C22 C23 C24 120.5(3) yes C22 C23 H23 120(2) no C24 C23 H23 119(2) no C19 C24 C23 121.7(3) yes C19 C24 H24 113(2) no C23 C24 H24 126(2) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 N3 1.270(3) yes O2 N4 1.273(3) yes N3 C7 1.346(3) yes N3 C8 1.510(3) yes N4 C7 1.344(3) yes N4 C9 1.505(3) yes N5 C14 1.369(3) yes N5 C15 1.387(3) yes N5 H5 0.85(3) no N6 C14 1.313(3) yes N6 C16 1.389(3) yes C7 C14 1.450(3) yes C8 C9 1.543(4) yes C8 C10 1.519(5) yes C8 C11 1.531(4) yes C9 C12 1.530(5) yes C9 C13 1.510(5) yes C10 H10A 1.07(4) no C10 H10B 1.01(4) no C10 H10C 1.04(4) no C11 H11A 1.04(4) no C11 H11B 1.08(6) no C11 H11C 0.99(4) no C12 H12A 1.11(3) no C12 H12B 1.06(3) no C12 H12C 1.01(4) no C13 H13A 1.02(3) no C13 H13B 1.08(4) no C13 H13C 0.87(4) no C15 C16 1.421(3) yes C15 C20 1.368(3) yes C16 C17 1.378(4) yes C17 C18 1.398(4) yes C17 H17 0.94(3) no C18 C19 1.435(3) yes C18 C21 1.423(4) yes C19 C20 1.406(4) yes C19 C24 1.429(4) yes C20 H20 1.01(3) no C21 C22 1.352(4) yes C21 H21 1.00(4) no C22 C23 1.403(5) yes C22 H22 1.04(3) no C23 C24 1.354(4) yes C23 H23 0.94(3) no C24 H24 0.99(3) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N5 H5 O2 0.85(3) 2.32(3) 2.806(3) 117(2) 1_555 N5 H5 N6 0.85(3) 2.45(3) 3.132(3) 138(2) 3_654 N5 H5 O1 0.85(3) 2.50(3) 3.117(3) 130(3) 3_654