#------------------------------------------------------------------------------ #$Date: 2016-02-20 05:06:23 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176774 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/20/60/2206024.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206024 loop_ _publ_author_name 'Laurent F. Bornaghi' 'Sally-Ann Poulsen' 'Peter C. Healy' 'Alan R. White' _publ_section_title ; N-(2-Nitrobenzenesulfonyl)-L-alanine methyl ester ; _journal_issue 6 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1665 _journal_page_last o1667 _journal_paper_doi 10.1107/S1600536805014315 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C10 H12 N2 O6 S' _chemical_formula_moiety 'C10 H12 N2 O6 S' _chemical_formula_sum 'C10 H12 N2 O6 S' _chemical_formula_weight 288.29 _chemical_melting_point 359 _chemical_name_systematic ; N-(2-nitrobenzenesulfonyl)-L-alanine methyl ester ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90 _cell_angle_beta 95.10(2) _cell_angle_gamma 90 _cell_formula_units_Z 2 _cell_length_a 8.845(3) _cell_length_b 13.335(5) _cell_length_c 5.5203(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 295 _cell_measurement_theta_max 17.0 _cell_measurement_theta_min 12.8 _cell_volume 648.5(3) _computing_cell_refinement 'MSC/AFC7 Diffractometer Control Software for Windows' _computing_data_collection ; MSC/AFC7 Diffractometer Control Software for Windows (Molecular Structure Corporation, 1999) ; _computing_data_reduction 'TEXSAN for Windows (Molecular Structure Corporation, 2001)' _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997)' _computing_publication_material 'TEXSAN for Windows aaand PLATON (Spek, 2003)' _computing_structure_refinement 'TEXSAN for Windows and SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'TEXSAN for Windows' _diffrn_ambient_temperature 295 _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device 'Rigaku AFC-7R' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Rigaku rotating anode' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.7107 _diffrn_reflns_av_R_equivalents 0.0329 _diffrn_reflns_av_sigmaI/netI 0.0422 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min -7 _diffrn_reflns_number 1708 _diffrn_reflns_reduction_process ' ?' _diffrn_reflns_theta_full 27.49 _diffrn_reflns_theta_max 27.49 _diffrn_reflns_theta_min 2.77 _diffrn_standards_decay_% 1.79 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.274 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.476 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_F_000 300 _exptl_crystal_size_max 0.400 _exptl_crystal_size_mid 0.200 _exptl_crystal_size_min 0.150 _refine_diff_density_max 0.202 _refine_diff_density_min -0.205 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack 0.24(12) _refine_ls_extinction_coef 0.041(7) _refine_ls_extinction_expression FC^*^=KFC[1+0.001XFC^2^\L^3^/SIN(2\Q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.022 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 173 _refine_ls_number_reflns 1608 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.022 _refine_ls_R_factor_all 0.0549 _refine_ls_R_factor_gt 0.0357 _refine_ls_shift/su_max 0.018 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0631P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0962 _refine_ls_wR_factor_ref 0.1055 _reflns_number_gt 1252 _reflns_number_total 1608 _reflns_threshold_expression I>2\s(I) _cod_data_source_file nc6028.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M 'P 21' _cod_database_code 2206024 _cod_database_fobs_code 2206024 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,1/2+y,-z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 0.0753(6) 0.0325(3) 0.0333(3) -0.0029(4) 0.0076(3) 0.0025(4) O1 0.082(2) 0.097(3) 0.0467(14) -0.0142(19) 0.0042(14) -0.0071(16) O2 0.063(2) 0.169(5) 0.122(3) 0.012(3) -0.029(2) 0.006(3) O3 0.085(2) 0.0530(16) 0.0613(17) -0.0254(15) 0.0169(15) -0.0053(13) O4 0.103(2) 0.0473(17) 0.0337(11) 0.0168(13) 0.0080(12) 0.0085(9) O5 0.0751(18) 0.0464(14) 0.0590(15) -0.0008(13) -0.0032(13) 0.0077(12) O6 0.087(2) 0.0545(16) 0.0685(19) 0.0015(16) -0.0218(16) -0.0103(14) N1 0.0699(19) 0.0407(19) 0.0318(12) 0.0033(13) 0.0018(13) -0.0036(10) N2 0.061(2) 0.084(3) 0.056(2) -0.007(2) -0.0058(17) 0.017(2) C1 0.0543(18) 0.0311(14) 0.0407(15) 0.0002(14) 0.0128(14) 0.0041(13) C2 0.0499(19) 0.054(2) 0.0505(18) 0.0023(16) 0.0135(15) 0.0097(16) C3 0.068(3) 0.066(3) 0.086(3) 0.021(2) 0.028(2) 0.029(3) C4 0.096(4) 0.041(2) 0.099(4) 0.006(2) 0.044(3) 0.001(2) C5 0.096(3) 0.049(2) 0.070(3) -0.015(2) 0.032(3) -0.019(2) C6 0.073(2) 0.0421(17) 0.0410(17) -0.0044(17) 0.0077(16) -0.0047(15) C7 0.064(2) 0.0407(15) 0.0377(14) 0.010(2) -0.0042(13) 0.0003(18) C8 0.0551(19) 0.0442(18) 0.0436(17) 0.0074(16) 0.0019(14) -0.0041(15) C9 0.090(3) 0.057(3) 0.106(4) -0.016(3) -0.020(3) -0.020(3) C10 0.076(3) 0.056(2) 0.059(2) 0.012(2) 0.012(2) -0.0119(19) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_type_symbol S1 0.21572(11) 0.79482(7) 0.30884(13) 0.0469(2) Uani 1.000 S O1 0.0574(4) 0.8623(3) -0.1697(5) 0.0753(13) Uani 1.000 O O2 -0.1436(4) 0.9414(4) -0.0973(8) 0.120(2) Uani 1.000 O O3 0.0778(4) 0.7430(2) 0.2378(5) 0.0658(10) Uani 1.000 O O4 0.2966(4) 0.77223(18) 0.5389(4) 0.0612(9) Uani 1.000 O O5 0.4676(3) 0.9698(2) 0.0264(5) 0.0607(9) Uani 1.000 O O6 0.6211(4) 0.9337(2) 0.3575(5) 0.0717(11) Uani 1.000 O N1 0.3333(4) 0.77466(19) 0.1071(4) 0.0476(10) Uani 1.000 N N2 -0.0115(4) 0.9217(3) -0.0549(6) 0.0677(14) Uani 1.000 N C1 0.1751(4) 0.9252(2) 0.3148(6) 0.0415(9) Uani 1.000 C C2 0.0725(4) 0.9752(3) 0.1511(7) 0.0509(11) Uani 1.000 C C3 0.0444(6) 1.0766(4) 0.1701(10) 0.0721(17) Uani 1.000 C C4 0.1188(6) 1.1298(3) 0.3554(11) 0.077(2) Uani 1.000 C C5 0.2194(6) 1.0833(3) 0.5191(9) 0.0702(16) Uani 1.000 C C6 0.2493(5) 0.9810(3) 0.5016(6) 0.0519(10) Uani 1.000 C C7 0.4949(4) 0.7982(3) 0.1611(5) 0.0480(10) Uani 1.000 C C8 0.5245(4) 0.9109(3) 0.1690(6) 0.0478(10) Uani 1.000 C C9 0.6588(7) 1.0394(4) 0.3886(11) 0.0861(19) Uani 1.000 C C10 0.5870(5) 0.7512(3) -0.0331(8) 0.0633(14) Uani 1.000 C H1 0.30170 0.79600 -0.03450 0.0540 Uiso 1.000 H H3 -0.02780 1.10750 0.05470 0.0830 Uiso 1.000 H H4 0.10150 1.19890 0.36960 0.0930 Uiso 1.000 H H5 0.27460 1.12020 0.64640 0.0830 Uiso 1.000 H H6 0.31760 0.94890 0.61830 0.0610 Uiso 1.000 H H7 0.52830 0.76970 0.31370 0.0560 Uiso 1.000 H H9A 0.76340 1.04400 0.44650 0.1040 Uiso 1.000 H H9B 0.64300 1.07100 0.23490 0.1040 Uiso 1.000 H H9C 0.59800 1.06800 0.50010 0.1040 Uiso 1.000 H H10A 0.69210 0.75590 0.01700 0.0760 Uiso 1.000 H H10B 0.56050 0.68130 -0.05060 0.0760 Uiso 1.000 H H10C 0.56480 0.78360 -0.18340 0.0760 Uiso 1.000 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l -1 -3 0 -2 -1 0 -2 -1 1 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O3 S1 O4 119.29(18) yes O3 S1 N1 108.52(17) yes O3 S1 C1 108.05(17) yes O4 S1 N1 105.97(18) yes O4 S1 C1 105.97(15) yes N1 S1 C1 108.66(15) yes C8 O6 C9 116.2(4) yes S1 N1 C7 120.02(19) yes O1 N2 O2 124.6(4) yes O1 N2 C2 118.3(3) yes O2 N2 C2 117.2(4) yes S1 N1 H1 113.00 no C7 N1 H1 110.00 no S1 C1 C2 125.3(3) yes C2 C1 C6 117.6(3) no S1 C1 C6 117.1(3) yes N2 C2 C3 116.6(4) yes C1 C2 C3 122.1(4) no N2 C2 C1 121.3(3) yes C2 C3 C4 119.2(5) no C3 C4 C5 120.3(4) no C4 C5 C6 121.1(4) no C1 C6 C5 119.7(4) no N1 C7 C10 109.8(3) yes C8 C7 C10 108.8(3) no N1 C7 C8 112.2(3) yes O6 C8 C7 110.3(3) yes O5 C8 O6 125.0(4) yes O5 C8 C7 124.7(3) yes C2 C3 H3 119.00 no C4 C3 H3 122.00 no C3 C4 H4 120.00 no C5 C4 H4 120.00 no C4 C5 H5 121.00 no C6 C5 H5 118.00 no C1 C6 H6 120.00 no C5 C6 H6 121.00 no N1 C7 H7 108.00 no C8 C7 H7 109.00 no C10 C7 H7 108.00 no O6 C9 H9A 108.00 no O6 C9 H9B 108.00 no O6 C9 H9C 110.00 no H9A C9 H9B 109.00 no H9A C9 H9C 111.00 no H9B C9 H9C 111.00 no C7 C10 H10A 110.00 no C7 C10 H10B 109.00 no C7 C10 H10C 110.00 no H10A C10 H10B 108.00 no H10A C10 H10C 110.00 no H10B C10 H10C 109.00 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S1 O3 1.426(3) yes S1 O4 1.433(3) yes S1 N1 1.613(3) yes S1 C1 1.776(3) yes O1 N2 1.212(5) yes O2 N2 1.200(5) yes O5 C8 1.191(5) yes O6 C8 1.322(5) yes O6 C9 1.455(6) yes N1 C7 1.468(5) yes N2 C2 1.485(5) yes N1 H1 0.8600 no C1 C2 1.393(5) no C1 C6 1.388(5) no C2 C3 1.381(7) no C3 C4 1.365(8) no C4 C5 1.360(7) no C5 C6 1.395(6) no C7 C8 1.525(6) no C7 C10 1.537(5) no C3 H3 0.9500 no C4 H4 0.9400 no C5 H5 0.9600 no C6 H6 0.9500 no C7 H7 0.9500 no C9 H9A 0.9500 no C9 H9B 0.9500 no C9 H9C 0.9300 no C10 H10A 0.9500 no C10 H10B 0.9600 no C10 H10C 0.9400 no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag S1 O1 3.015(3) . no S1 O1 3.431(3) 1_556 no O1 S1 3.431(3) 1_554 no O1 S1 3.015(3) . no O1 O3 2.748(4) . no O1 O4 3.019(5) 1_554 no O1 N1 2.999(5) . no O1 C1 3.227(5) 1_554 no O1 C6 3.038(5) 1_554 no O3 C3 3.276(6) 2_545 no O3 C4 3.323(6) 2_546 no O3 O1 2.748(4) . no O3 N2 2.947(5) . no O4 O1 3.019(5) 1_556 no O4 C9 3.151(6) 2_646 no O4 C10 3.344(5) 1_556 no O4 N1 3.125(3) 1_556 no O5 C6 3.396(5) . no O5 C6 3.339(5) 1_554 no O5 C1 3.212(5) . no O5 N1 2.911(4) . no O1 H4 2.7700 2_545 no O1 H1 2.3900 . no O1 H6 2.9100 1_554 no O2 H9A 2.9200 1_454 no O2 H3 2.5500 . no O3 H4 2.8600 2_546 no O3 H3 2.4400 2_545 no O4 H9C 2.8900 2_646 no O4 H10C 2.7100 1_556 no O4 H1 2.3700 1_556 no O4 H6 2.4000 . no O4 H7 2.4900 . no O5 H1 2.7500 . no O5 H6 2.5300 1_554 no O5 H9B 2.2900 . no O5 H10C 2.9000 . no O5 H10B 2.8400 2_655 no N1 O1 2.999(5) . no N1 O4 3.125(3) 1_554 no N1 O5 2.911(4) . no N2 O3 2.947(5) . no C1 O1 3.227(5) 1_556 no C1 O5 3.212(5) . no C1 C8 3.268(5) . no C3 O3 3.276(6) 2_555 no C4 O3 3.323(6) 2_556 no C6 O1 3.038(5) 1_556 no C6 C8 3.311(6) . no C6 O5 3.396(5) . no C6 O5 3.339(5) 1_556 no C8 C1 3.268(5) . no C8 C6 3.311(6) . no C9 O4 3.151(6) 2_656 no C10 O4 3.344(5) 1_554 no C3 H9A 3.0600 1_455 no C10 H5 2.9400 2_646 no H1 O1 2.3900 . no H1 O4 2.3700 1_554 no H1 O5 2.7500 . no H1 H10C 2.5400 . no H3 O2 2.5500 . no H3 O3 2.4400 2_555 no H4 O1 2.7700 2_555 no H4 O3 2.8600 2_556 no H5 C10 2.9400 2_656 no H5 H10A 2.5900 2_656 no H6 O1 2.9100 1_556 no H6 O4 2.4000 . no H6 O5 2.5300 1_556 no H7 O4 2.4900 . no H9A O2 2.9200 1_656 no H9A C3 3.0600 1_655 no H9B O5 2.2900 . no H9B H10B 2.4700 2_655 no H9C O4 2.8900 2_656 no H10A H5 2.5900 2_646 no H10B O5 2.8400 2_645 no H10B H9B 2.4700 2_645 no H10C O4 2.7100 1_554 no H10C O5 2.9000 . no H10C H1 2.5400 . no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O1 . 0.86 2.39 2.999(5) 128 yes N1 H1 O4 1_554 0.86 2.37 3.125(3) 147 yes C3 H3 O3 2_555 0.95 2.44 3.276(6) 146 yes C6 H6 O4 . 0.95 2.40 2.820(5) 107 yes C6 H6 O5 1_556 0.95 2.53 3.339(5) 144 yes C7 H7 O4 . 0.95 2.49 2.863(4) 103 yes C9 H9B O5 . 0.95 2.29 2.668(7) 103 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O3 S1 N1 C7 -165.3(3) no O4 S1 N1 C7 -36.1(3) no C1 S1 N1 C7 77.5(3) no O3 S1 C1 C2 -37.3(4) no O3 S1 C1 C6 141.1(3) no O4 S1 C1 C2 -166.2(3) no O4 S1 C1 C6 12.2(3) no N1 S1 C1 C2 80.3(3) no N1 S1 C1 C6 -101.3(3) no C9 O6 C8 O5 0.0(6) no C9 O6 C8 C7 -179.5(4) no S1 N1 C7 C10 167.4(2) no S1 N1 C7 C8 -71.6(3) no O2 N2 C2 C3 -42.9(6) no O1 N2 C2 C1 -43.1(5) no O1 N2 C2 C3 136.4(4) no O2 N2 C2 C1 137.6(4) no C6 C1 C2 N2 179.7(3) no C6 C1 C2 C3 0.3(6) no S1 C1 C6 C5 -178.5(3) no C2 C1 C6 C5 0.0(6) no S1 C1 C2 N2 -1.9(5) no S1 C1 C2 C3 178.6(3) no N2 C2 C3 C4 -179.8(4) no C1 C2 C3 C4 -0.3(7) no C2 C3 C4 C5 0.0(8) no C3 C4 C5 C6 0.2(8) no C4 C5 C6 C1 -0.2(7) no N1 C7 C8 O5 -43.2(4) no N1 C7 C8 O6 136.3(3) no C10 C7 C8 O5 78.4(4) no C10 C7 C8 O6 -102.1(3) no