#------------------------------------------------------------------------------ #$Date: 2010-01-30 15:59:17 +0200 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2207458.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2207458 _space_group_IT_number 4 _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _[local]_cod_cif_authors_sg_H-M 'P 21' loop_ _publ_author_name 'Gzella, Andrzej' '\.Zwawiak, Justyna' 'Zaprutko, Lucjusz' _publ_section_title ; (S)-(-)-3-Chloro-1-(4-morpholino-5-nitro-1H-imidazol-1-yl)propan-2-ol ; _journal_coeditor_code BT6787 _journal_issue 12 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o4232 _journal_page_last o4231 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C10 H15 Cl N4 O4' _chemical_formula_moiety 'C10 H15 Cl N4 O4' _chemical_formula_sum 'C10 H15 Cl N4 O4' _chemical_formula_weight 290.71 _chemical_name_systematic ; S-(-)-3-Chloro-1-(4-morpholino-5-nitro-1H-imidazol-1-yl)propan-2-ol ; _symmetry_cell_setting Monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 106.45(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 9.677(2) _cell_length_b 5.2910(10) _cell_length_c 12.818(3) _cell_measurement_reflns_used 42 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.0 _cell_measurement_theta_min 9.7 _cell_volume 629.4(2) _computing_cell_refinement 'KM-4 Software' _computing_data_collection 'KM-4 Software (Kuma, 1996)' _computing_data_reduction 'KM-4 Software' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type 'Kuma KM-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.0606 _diffrn_reflns_av_sigmaI/netI 0.0283 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 2272 _diffrn_reflns_theta_full 70.20 _diffrn_reflns_theta_max 70.20 _diffrn_reflns_theta_min 3.60 _diffrn_standards_decay_% 2.6 _diffrn_standards_interval_count 100 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 2.878 _exptl_absorpt_correction_T_max 0.866 _exptl_absorpt_correction_T_min 0.401 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.534 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 304 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.424 _refine_diff_density_min -0.456 _refine_ls_abs_structure_details 'Flack (1983), mit 950 Friedel-Reflexpaare' _refine_ls_abs_structure_Flack 0.00(2) _refine_ls_extinction_coef 0.013(2) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 1.093 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 191 _refine_ls_number_reflns 2229 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.093 _refine_ls_R_factor_all 0.0569 _refine_ls_R_factor_gt 0.0441 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0961P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1160 _refine_ls_wR_factor_ref 0.1231 _reflns_number_gt 1953 _reflns_number_total 2229 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bt6787.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.3639 0.7018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.7533(2) 0.0894(5) 0.94524(18) 0.0359(5) Uani d . 1 N C2 0.8597(3) 0.2438(6) 0.9965(2) 0.0399(6) Uani d . 1 C H2A 0.9017 0.3594 0.9601 0.052(10) Uiso calc R 1 H N3 0.9003(2) 0.2187(5) 1.10299(19) 0.0389(5) Uani d . 1 N C4 0.8117(3) 0.0382(6) 1.1254(2) 0.0353(6) Uani d . 1 C C5 0.7202(3) -0.0493(6) 1.0268(2) 0.0347(5) Uani d . 1 C C6 0.6800(3) 0.1020(6) 0.8286(2) 0.0378(6) Uani d . 1 C H6A 0.6684 0.2774 0.8058 0.044(9) Uiso calc R 1 H H6B 0.5849 0.0275 0.8144 0.036(8) Uiso calc R 1 H C7 0.7648(3) -0.0369(6) 0.7634(2) 0.0376(6) Uani d . 1 C H7A 0.7774 -0.2125 0.7886 0.038(8) Uiso calc R 1 H C8 0.6865(4) -0.0373(7) 0.6433(2) 0.0467(7) Uani d . 1 C H8A 0.5952 -0.1243 0.6319 0.054(11) Uiso calc R 1 H H8B 0.7432 -0.1302 0.6048 0.066(12) Uiso calc R 1 H Cl9 0.65360(9) 0.27363(18) 0.58757(7) 0.0593(3) Uani d . 1 Cl O10 0.9007(2) 0.0727(4) 0.78200(19) 0.0447(5) Uani d . 1 O H10A 0.974(5) 0.009(10) 0.805(4) 0.062(13) Uiso d . 1 H N11 0.8219(3) -0.0351(6) 1.22860(19) 0.0408(5) Uani d . 1 N C12 0.9519(3) 0.0276(6) 1.3145(2) 0.0399(6) Uani d . 1 C H12A 0.9451 0.1981 1.3404 0.039(9) Uiso calc R 1 H H12B 1.0353 0.0183 1.2869 0.031(7) Uiso calc R 1 H C13 0.9673(3) -0.1574(6) 1.4057(2) 0.0432(7) Uani d . 1 C H13A 0.9827 -0.3250 1.3804 0.054(11) Uiso calc R 1 H H13B 1.0515 -0.1133 1.4647 0.042(9) Uiso calc R 1 H O14 0.8446(3) -0.1625(5) 1.44572(18) 0.0526(6) Uani d . 1 O C15 0.7188(3) -0.2244(8) 1.3603(3) 0.0522(8) Uani d . 1 C H15A 0.6357 -0.2233 1.3884 0.056(10) Uiso calc R 1 H H15B 0.7288 -0.3934 1.3341 0.057(11) Uiso calc R 1 H C16 0.6950(3) -0.0422(7) 1.2684(2) 0.0446(6) Uani d . 1 C H16A 0.6116 -0.0932 1.2102 0.051(10) Uiso calc R 1 H H16B 0.6767 0.1249 1.2927 0.072(14) Uiso calc R 1 H N17 0.6425(2) -0.2745(5) 1.0065(2) 0.0390(5) Uani d . 1 N O18 0.6184(3) -0.3875(5) 1.0836(2) 0.0549(6) Uani d . 1 O O19 0.6031(3) -0.3540(5) 0.9115(2) 0.0534(6) Uani d . 1 O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0340(11) 0.0419(13) 0.0312(11) -0.0017(9) 0.0083(9) 0.0010(9) C2 0.0391(13) 0.0404(14) 0.0398(14) -0.0058(12) 0.0107(10) 0.0007(12) N3 0.0362(11) 0.0414(14) 0.0376(11) -0.0070(10) 0.0078(9) -0.0015(10) C4 0.0313(12) 0.0388(14) 0.0351(13) -0.0017(10) 0.0080(10) -0.0004(10) C5 0.0301(12) 0.0413(14) 0.0322(12) -0.0048(10) 0.0081(9) -0.0017(10) C6 0.0324(12) 0.0474(16) 0.0320(13) 0.0060(11) 0.0063(10) 0.0030(12) C7 0.0396(14) 0.0404(14) 0.0334(12) 0.0041(11) 0.0113(10) 0.0014(11) C8 0.0504(16) 0.0553(18) 0.0352(14) 0.0017(14) 0.0133(12) -0.0035(13) Cl9 0.0556(5) 0.0739(6) 0.0461(4) 0.0117(4) 0.0105(3) 0.0181(4) O10 0.0344(11) 0.0515(13) 0.0490(12) 0.0066(9) 0.0132(9) 0.0098(10) N11 0.0364(12) 0.0543(14) 0.0307(11) -0.0045(10) 0.0077(9) 0.0016(10) C12 0.0416(14) 0.0431(15) 0.0330(13) -0.0031(11) 0.0072(11) -0.0025(11) C13 0.0436(15) 0.0524(18) 0.0332(13) 0.0035(12) 0.0104(11) 0.0026(12) O14 0.0517(12) 0.0759(17) 0.0337(10) 0.0057(11) 0.0174(8) 0.0026(10) C15 0.0480(16) 0.066(2) 0.0469(16) -0.0055(16) 0.0211(13) 0.0068(16) C16 0.0375(14) 0.0558(17) 0.0417(15) 0.0025(13) 0.0131(12) -0.0003(13) N17 0.0333(11) 0.0394(13) 0.0439(12) -0.0042(10) 0.0104(9) -0.0035(10) O18 0.0591(13) 0.0505(14) 0.0579(14) -0.0154(11) 0.0211(11) 0.0018(10) O19 0.0581(13) 0.0486(13) 0.0509(13) -0.0095(11) 0.0110(10) -0.0158(10) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C2 1.333(4) N1 C5 1.387(4) N1 C6 1.464(3) C2 N3 1.316(4) C2 H2A 0.9300 N3 C4 1.367(4) C4 N11 1.356(4) C4 C5 1.400(4) C5 N17 1.394(4) C6 C7 1.516(4) C6 H6A 0.9700 C6 H6B 0.9700 C7 O10 1.395(4) C7 C8 1.511(4) C7 H7A 0.9800 C8 Cl9 1.786(4) C8 H8A 0.9700 C8 H8B 0.9700 O10 H10A 0.77(5) N11 C12 1.456(4) N11 C16 1.458(4) C12 C13 1.499(4) C12 H12A 0.9700 C12 H12B 0.9700 C13 O14 1.421(4) C13 H13A 0.9700 C13 H13B 0.9700 O14 C15 1.425(4) C15 C16 1.489(5) C15 H15A 0.9700 C15 H15B 0.9700 C16 H16A 0.9700 C16 H16B 0.9700 N17 O18 1.232(3) N17 O19 1.242(3) loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C5 105.3(2) C2 N1 C6 124.0(2) C5 N1 C6 130.2(2) N3 C2 N1 114.3(3) N3 C2 H2A 122.8 N1 C2 H2A 122.8 C2 N3 C4 105.5(2) N11 C4 N3 121.9(3) N11 C4 C5 129.7(3) N3 C4 C5 108.4(2) N1 C5 N17 122.6(2) N1 C5 C4 106.4(2) N17 C5 C4 128.4(2) N1 C6 C7 111.1(2) N1 C6 H6A 109.4 C7 C6 H6A 109.4 N1 C6 H6B 109.4 C7 C6 H6B 109.4 H6A C6 H6B 108.0 O10 C7 C8 110.5(2) O10 C7 C6 109.6(2) C8 C7 C6 111.6(2) O10 C7 H7A 108.3 C8 C7 H7A 108.3 C6 C7 H7A 108.3 C7 C8 Cl9 112.8(2) C7 C8 H8A 109.0 Cl9 C8 H8A 109.0 C7 C8 H8B 109.0 Cl9 C8 H8B 109.0 H8A C8 H8B 107.8 C7 O10 H10A 128(4) C4 N11 C12 118.8(2) C4 N11 C16 120.9(2) C12 N11 C16 112.0(2) N11 C12 C13 108.3(3) N11 C12 H12A 110.0 C13 C12 H12A 110.0 N11 C12 H12B 110.0 C13 C12 H12B 110.0 H12A C12 H12B 108.4 O14 C13 C12 112.7(3) O14 C13 H13A 109.1 C12 C13 H13A 109.1 O14 C13 H13B 109.1 C12 C13 H13B 109.1 H13A C13 H13B 107.8 C13 O14 C15 110.2(2) O14 C15 C16 111.5(3) O14 C15 H15A 109.3 C16 C15 H15A 109.3 O14 C15 H15B 109.3 C16 C15 H15B 109.3 H15A C15 H15B 108.0 N11 C16 C15 109.7(3) N11 C16 H16A 109.7 C15 C16 H16A 109.7 N11 C16 H16B 109.7 C15 C16 H16B 109.7 H16A C16 H16B 108.2 O18 N17 O19 123.1(3) O18 N17 C5 118.6(2) O19 N17 C5 118.2(2) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C5 N1 C2 N3 0.6(3) C6 N1 C2 N3 173.0(2) N1 C2 N3 C4 -1.7(3) C2 N3 C4 N11 -179.3(3) C2 N3 C4 C5 2.2(3) C2 N1 C5 N17 -162.5(3) C6 N1 C5 N17 25.7(4) C2 N1 C5 C4 0.8(3) C6 N1 C5 C4 -171.0(3) N11 C4 C5 N1 179.8(3) N3 C4 C5 N1 -1.9(3) N11 C4 C5 N17 -18.2(5) N3 C4 C5 N17 160.1(3) C2 N1 C6 C7 82.9(3) C5 N1 C6 C7 -106.6(3) N1 C6 C7 O10 -60.2(3) N1 C6 C7 C8 177.0(3) O10 C7 C8 Cl9 -62.5(3) C6 C7 C8 Cl9 59.7(3) N3 C4 N11 C12 -16.5(4) C5 C4 N11 C12 161.7(3) N3 C4 N11 C16 129.2(3) C5 C4 N11 C16 -52.6(5) C4 N11 C12 C13 -156.0(3) C16 N11 C12 C13 55.4(3) N11 C12 C13 O14 -56.5(3) C12 C13 O14 C15 58.1(4) C13 O14 C15 C16 -57.7(4) C4 N11 C16 C15 155.8(3) C12 N11 C16 C15 -56.3(4) O14 C15 C16 N11 56.7(4) N1 C5 N17 O18 179.5(3) C4 C5 N17 O18 20.1(4) N1 C5 N17 O19 0.8(4) C4 C5 N17 O19 -158.6(3) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O10 H10A N3 2_747 0.76(5) 2.10(5) 2.790(3) 150(5) C6 H6A Cl9 . 0.97 2.76 3.160(3) 105 C6 H6B O19 . 0.97 2.35 2.820(4) 109 C6 H6A O19 1_565 0.97 2.55 3.227(4) 127 C8 H8B O14 1_554 0.97 2.51 3.375(4) 149 C16 H16A O18 . 0.97 2.26 2.916(4) 124 C16 H16A O19 2_657 0.97 2.55 3.296(4) 134 _cod_database_code 2207458