#------------------------------------------------------------------------------ #$Date: 2016-02-20 22:30:07 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176789 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/22/02/2220269.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2220269 loop_ _publ_author_name 'Li, Zhi-An' 'Chen, Dao-Yong' 'Liu, Li-Jian' _publ_section_title ; Redetermination of 1-naphthaleneacetic acid ; _journal_coeditor_code LH2723 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o2310 _journal_paper_doi 10.1107/S1600536808036246 _journal_volume 64 _journal_year 2008 _chemical_formula_iupac 'C12 H10 O2' _chemical_formula_moiety 'C12 H10 O2' _chemical_formula_sum 'C12 H10 O2' _chemical_formula_weight 186.20 _chemical_name_systematic ; 1-naphthaleneacetic acid ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 91.987(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.7079(19) _cell_length_b 5.1464(8) _cell_length_c 15.014(2) _cell_measurement_reflns_used 2268 _cell_measurement_temperature 200(2) _cell_measurement_theta_max 24.87 _cell_measurement_theta_min 2.71 _cell_volume 981.3(2) _computing_cell_refinement 'SAINT-Plus (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction 'SAINT-Plus (Bruker, 2001)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'PLATON (Spek, 2003)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 200(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area-detector' _diffrn_measurement_method '0.3\% wide \w exposures' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine focus sealed Siemens Mo tube' _diffrn_radiation_type 'Mo k\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0234 _diffrn_reflns_av_sigmaI/netI 0.0228 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 9953 _diffrn_reflns_theta_full 26.49 _diffrn_reflns_theta_max 26.49 _diffrn_reflns_theta_min 1.60 _exptl_absorpt_coefficient_mu 0.085 _exptl_absorpt_correction_T_max 0.9932 _exptl_absorpt_correction_T_min 0.9731 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1997)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.260 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 392 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.04 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.193 _refine_diff_density_min -0.143 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.043 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 130 _refine_ls_number_reflns 2025 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.043 _refine_ls_R_factor_all 0.0711 _refine_ls_R_factor_gt 0.0488 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0798P)^2^+0.0818P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1372 _refine_ls_wR_factor_ref 0.1482 _reflns_number_gt 1416 _reflns_number_total 2025 _reflns_threshold_expression I>2\s(I) _cod_data_source_file lh2723.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2220269 _cod_database_fobs_code 2220269 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy C C1 0.27991(11) 0.1115(3) 0.80540(10) 0.0549(4) Uani d . 1 C C2 0.19500(12) -0.0420(3) 0.77187(10) 0.0579(4) Uani d . 1 C C3 0.15963(15) -0.0059(4) 0.68586(12) 0.0769(5) Uani d . 1 H H3 0.1042 -0.1073 0.6636 0.092 Uiso calc R 1 C C4 0.20412(19) 0.1783(5) 0.63049(13) 0.0905(6) Uani d . 1 H H4 0.1787 0.1970 0.5720 0.109 Uiso calc R 1 C C5 0.28320(17) 0.3281(4) 0.66118(13) 0.0815(6) Uani d . 1 H H5 0.3118 0.4516 0.6238 0.098 Uiso calc R 1 C C6 0.32383(12) 0.3020(3) 0.74899(12) 0.0649(5) Uani d . 1 C C7 0.40692(17) 0.4581(4) 0.78251(17) 0.0924(7) Uani d . 1 H H7 0.4355 0.5838 0.7460 0.111 Uiso calc R 1 C C8 0.44567(19) 0.4292(6) 0.8661(2) 0.1132(9) Uani d . 1 H H8 0.5007 0.5345 0.8870 0.136 Uiso calc R 1 C C9 0.40414(19) 0.2431(6) 0.92165(16) 0.1053(8) Uani d . 1 H H9 0.4319 0.2244 0.9794 0.126 Uiso calc R 1 C C10 0.32338(15) 0.0874(4) 0.89291(12) 0.0775(5) Uani d . 1 H H10 0.2965 -0.0361 0.9312 0.093 Uiso calc R 1 C C11 0.14486(15) -0.2410(3) 0.82983(12) 0.0728(5) Uani d . 1 H H11A 0.0989 -0.3494 0.7927 0.087 Uiso calc R 1 H H11B 0.1997 -0.3517 0.8556 0.087 Uiso calc R 1 C C12 0.08232(12) -0.1303(3) 0.90375(11) 0.0604(4) Uani d . 1 O O1 0.07037(12) -0.2832(3) 0.96952(10) 0.0917(5) Uani d . 1 H H1 0.023(2) -0.225(5) 1.011(2) 0.138 Uiso d . 1 O O2 0.04415(11) 0.0874(2) 0.90046(8) 0.0860(5) Uani d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0591(8) 0.0544(9) 0.0523(9) 0.0066(7) 0.0167(7) -0.0096(7) C2 0.0627(9) 0.0566(9) 0.0557(9) 0.0027(7) 0.0183(7) -0.0095(7) C3 0.0734(11) 0.0958(14) 0.0620(12) -0.0017(9) 0.0076(9) -0.0150(9) C4 0.0950(14) 0.1195(17) 0.0576(11) 0.0153(14) 0.0112(10) 0.0128(11) C5 0.0952(14) 0.0817(13) 0.0698(13) 0.0084(11) 0.0328(11) 0.0162(10) C6 0.0638(9) 0.0585(9) 0.0742(11) 0.0034(7) 0.0289(8) -0.0099(8) C7 0.0866(13) 0.0785(13) 0.1152(19) -0.0171(11) 0.0461(13) -0.0290(12) C8 0.0819(14) 0.133(2) 0.126(2) -0.0281(14) 0.0250(14) -0.0627(18) C9 0.0887(14) 0.146(2) 0.0808(15) -0.0005(15) -0.0074(12) -0.0414(15) C10 0.0830(12) 0.0901(13) 0.0600(11) 0.0066(10) 0.0102(9) -0.0117(10) C11 0.0857(11) 0.0573(10) 0.0774(12) -0.0064(8) 0.0317(9) -0.0109(8) C12 0.0658(9) 0.0517(9) 0.0649(10) -0.0026(7) 0.0202(7) 0.0001(7) O1 0.1183(11) 0.0755(9) 0.0845(9) 0.0278(7) 0.0501(8) 0.0218(7) O2 0.1095(10) 0.0677(8) 0.0838(9) 0.0248(7) 0.0461(7) 0.0141(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C10 C1 C2 123.38(16) no C10 C1 C6 117.74(16) no C2 C1 C6 118.88(15) no C3 C2 C1 118.83(15) no C3 C2 C11 120.60(16) no C1 C2 C11 120.57(15) no C2 C3 C4 122.00(19) no C2 C3 H3 119.0 no C4 C3 H3 119.0 no C5 C4 C3 120.17(19) no C5 C4 H4 119.9 no C3 C4 H4 119.9 no C4 C5 C6 121.07(17) no C4 C5 H5 119.5 no C6 C5 H5 119.5 no C5 C6 C7 121.88(18) no C5 C6 C1 119.03(16) no C7 C6 C1 119.08(19) no C8 C7 C6 121.2(2) no C8 C7 H7 119.4 no C6 C7 H7 119.4 no C7 C8 C9 120.3(2) no C7 C8 H8 119.8 no C9 C8 H8 119.8 no C10 C9 C8 121.0(2) no C10 C9 H9 119.5 no C8 C9 H9 119.5 no C9 C10 C1 120.6(2) no C9 C10 H10 119.7 no C1 C10 H10 119.7 no C12 C11 C2 114.62(13) no C12 C11 H11A 108.6 no C2 C11 H11A 108.6 no C12 C11 H11B 108.6 no C2 C11 H11B 108.6 no H11A C11 H11B 107.6 no O2 C12 O1 122.64(14) no O2 C12 C11 122.59(15) no O1 C12 C11 114.75(14) no C12 O1 H1 114.4(17) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag C1 C10 1.413(2) no C1 C2 1.416(2) no C1 C6 1.422(2) no C2 C3 1.365(3) no C2 C11 1.500(2) no C3 C4 1.394(3) no C3 H3 0.9300 no C4 C5 1.336(3) no C4 H4 0.9300 no C5 C6 1.405(3) no C5 H5 0.9300 no C6 C7 1.406(3) no C7 C8 1.341(4) no C7 H7 0.9300 no C8 C9 1.386(4) no C8 H8 0.9300 no C9 C10 1.360(3) no C9 H9 0.9300 no C10 H10 0.9300 no C11 C12 1.500(2) no C11 H11A 0.9700 no C11 H11B 0.9700 no C12 O2 1.2209(19) no C12 O1 1.2759(19) no O1 H1 0.93(3) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C3 H3 O2 2_546 0.93 2.61 3.541(2) 176.8 yes O1 H1 O2 3_557 0.93(3) 1.76(3) 2.6723(17) 168(3) yes C11 H11B Cg1 1_545 0.97 2.87 3.746(2) 151 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C10 C1 C2 C3 -179.14(15) no C6 C1 C2 C3 1.4(2) no C10 C1 C2 C11 0.8(2) no C6 C1 C2 C11 -178.64(12) no C1 C2 C3 C4 -0.4(3) no C11 C2 C3 C4 179.63(16) no C2 C3 C4 C5 -0.6(3) no C3 C4 C5 C6 0.7(3) no C4 C5 C6 C7 -179.91(18) no C4 C5 C6 C1 0.4(3) no C10 C1 C6 C5 179.13(15) no C2 C1 C6 C5 -1.4(2) no C10 C1 C6 C7 -0.6(2) no C2 C1 C6 C7 178.88(14) no C5 C6 C7 C8 -179.27(19) no C1 C6 C7 C8 0.5(3) no C6 C7 C8 C9 0.0(3) no C7 C8 C9 C10 -0.3(4) no C8 C9 C10 C1 0.1(3) no C2 C1 C10 C9 -179.13(17) no C6 C1 C10 C9 0.3(2) no C3 C2 C11 C12 -110.23(19) no C1 C2 C11 C12 69.8(2) no C2 C11 C12 O2 24.3(3) no C2 C11 C12 O1 -157.00(17) no