#------------------------------------------------------------------------------ #$Date: 2013-08-29 18:37:19 +0300 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/22/84/2228456.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2228456 loop_ _publ_author_name 'Ee, Gwendoline Cheng Lian' 'Sim, Wei Chung' 'Kwong, Huey Chong' 'Mohamed Tahir, Mohamed Ibrahim' 'Silong, Sidik' _publ_section_title ; 1,3,6-Trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-enyl)-9H-xanthen-9-one ; _journal_coeditor_code KP2293 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o3362 _journal_page_last o3363 _journal_volume 66 _journal_year 2010 _chemical_formula_iupac 'C24 H26 O6' _chemical_formula_moiety 'C24 H26 O6' _chemical_formula_sum 'C24 H26 O6' _chemical_formula_weight 410.47 _chemical_melting_point 452 _chemical_name_common ?-mangostin _chemical_name_systematic ; 1,3,6-Trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-enyl)-9H-xanthen-9-one ; _space_group_IT_number 60 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2n 2ab' _symmetry_space_group_name_H-M 'P b c n' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 14.6818(3) _cell_length_b 9.53505(19) _cell_length_c 29.8893(6) _cell_measurement_reflns_used 5947 _cell_measurement_temperature 150 _cell_measurement_theta_max 71.2341 _cell_measurement_theta_min 2.9545 _cell_volume 4184.25(15) _computing_cell_refinement 'CrysAlis CCD (Oxford Diffraction, 2006)' _computing_data_collection 'CrysAlis CCD (Oxford Diffraction, 2006)' _computing_data_reduction 'CrysAlis RED (Oxford Diffraction, 2006)' _computing_molecular_graphics 'Mercury (Macrae et al., 2006)' _computing_publication_material 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_refinement 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 150 _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.990 _diffrn_measurement_device Area _diffrn_measurement_device_type 'Oxford Diffraction Gemini E' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_type 'Cu K\a' _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.034 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 29 _diffrn_reflns_limit_l_min -36 _diffrn_reflns_number 13773 _diffrn_reflns_theta_full 69.946 _diffrn_reflns_theta_max 71.373 _diffrn_reflns_theta_min 4.221 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.765 _exptl_absorpt_correction_T_max 0.9699 _exptl_absorpt_correction_T_min 0.9264 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(CrysAlis PRO; Oxford Diffraction, 2006)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.303 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 1744 _exptl_crystal_size_max 0.110 _exptl_crystal_size_mid 0.100 _exptl_crystal_size_min 0.040 _refine_diff_density_max 0.34 _refine_diff_density_min -0.27 _refine_ls_extinction_method None _refine_ls_goodness_of_fit_ref 0.8745 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 271 _refine_ls_number_reflns 4018 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0587 _refine_ls_R_factor_gt 0.0406 _refine_ls_shift/su_max 0.0003346 _refine_ls_shift/su_mean 0.0000331 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details ; Method= Modified Sheldrick w=1/[\s^2^(F^2^) + (0.08P)^2^ + 0.00P], where P=[max(Fo^2^,0) + 2Fc^2^]/3 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.113 _refine_ls_wR_factor_gt 0.1064 _refine_ls_wR_factor_ref 0.1130 _reflns_number_gt 2812 _reflns_number_total 4032 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file kp2293.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P b c n ' _cod_original_cell_volume 4184.24(14) _cod_database_code 2228456 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,-z -x+1/2,y+1/2,z x+1/2,-y+1/2,-z x,-y,z+1/2 -x,y,-z+1/2 -x+1/2,-y+1/2,z+1/2 x+1/2,y+1/2,-z+1/2 loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group O O1 0.87635(7) 0.30339(12) 0.25523(4) 0.0309 Uani 1.0000 . . C C2 0.82099(10) 0.22222(17) 0.28118(5) 0.0276 Uani 1.0000 . . C C3 0.72644(10) 0.23373(17) 0.27827(5) 0.0279 Uani 1.0000 . . C C4 0.68351(10) 0.32642(17) 0.24630(5) 0.0285 Uani 1.0000 . . O O5 0.59844(7) 0.32795(13) 0.24258(4) 0.0368 Uani 1.0000 . . C C6 0.74439(10) 0.41346(17) 0.21923(5) 0.0274 Uani 1.0000 . . C C7 0.83874(10) 0.39435(17) 0.22495(5) 0.0274 Uani 1.0000 . . C C8 0.90312(10) 0.46582(18) 0.19999(6) 0.0307 Uani 1.0000 . . C C9 0.87454(10) 0.55982(17) 0.16816(6) 0.0307 Uani 1.0000 . . O O10 0.93348(7) 0.63408(13) 0.14256(4) 0.0361 Uani 1.0000 . . C C11 0.78053(10) 0.58382(17) 0.16158(5) 0.0292 Uani 1.0000 . . C C12 0.71573(10) 0.51369(18) 0.18686(5) 0.0286 Uani 1.0000 . . C C13 0.61617(10) 0.55256(18) 0.17851(6) 0.0305 Uani 1.0000 . . C C14 0.58048(10) 0.47960(19) 0.13754(6) 0.0329 Uani 1.0000 . . C C15 0.54434(11) 0.5383(2) 0.10128(6) 0.0416 Uani 1.0000 . . C C16 0.52901(15) 0.6929(3) 0.09490(8) 0.0574 Uani 1.0000 . . C C17 0.51697(14) 0.4474(3) 0.06219(7) 0.0634 Uani 1.0000 . . O O18 0.75300(8) 0.68622(13) 0.13202(4) 0.0356 Uani 1.0000 . . C C19 0.76973(12) 0.6541(2) 0.08604(6) 0.0444 Uani 1.0000 . . C C20 0.67452(10) 0.14669(17) 0.30706(5) 0.0291 Uani 1.0000 . . O O21 0.58222(7) 0.15647(13) 0.30532(4) 0.0349 Uani 1.0000 . . C C22 0.71415(10) 0.05261(18) 0.33651(5) 0.0302 Uani 1.0000 . . C C23 0.65776(11) -0.03859(19) 0.36731(6) 0.0337 Uani 1.0000 . . C C24 0.63628(11) 0.0336(2) 0.41077(6) 0.0370 Uani 1.0000 . . C C25 0.65495(12) -0.0099(2) 0.45188(7) 0.0441 Uani 1.0000 . . C C26 0.62764(17) 0.0757(3) 0.49190(8) 0.0589 Uani 1.0000 . . C C27 0.7041(2) -0.1435(3) 0.46259(9) 0.0688 Uani 1.0000 . . C C28 0.81001(11) 0.04585(18) 0.33691(6) 0.0309 Uani 1.0000 . . C C29 0.86367(10) 0.12942(18) 0.30953(6) 0.0311 Uani 1.0000 . . O O30 0.84808(8) -0.04872(13) 0.36537(4) 0.0388 Uani 1.0000 . . H H81 0.9656 0.4502 0.2049 0.0363 Uiso 1.0000 . . H H131 0.6130 0.6516 0.1755 0.0361 Uiso 1.0000 . . H H132 0.5811 0.5267 0.2037 0.0360 Uiso 1.0000 . . H H141 0.5857 0.3795 0.1381 0.0387 Uiso 1.0000 . . H H161 0.5550 0.7236 0.0664 0.0850 Uiso 1.0000 . . H H163 0.5558 0.7469 0.1192 0.0852 Uiso 1.0000 . . H H162 0.4643 0.7120 0.0934 0.0857 Uiso 1.0000 . . H H171 0.4551 0.4673 0.0536 0.0945 Uiso 1.0000 . . H H173 0.5552 0.4712 0.0368 0.0938 Uiso 1.0000 . . H H172 0.5250 0.3454 0.0687 0.0952 Uiso 1.0000 . . H H191 0.7492 0.7303 0.0678 0.0666 Uiso 1.0000 . . H H193 0.8329 0.6388 0.0802 0.0658 Uiso 1.0000 . . H H192 0.7357 0.5710 0.0777 0.0666 Uiso 1.0000 . . H H231 0.6891 -0.1275 0.3725 0.0390 Uiso 1.0000 . . H H232 0.6016 -0.0609 0.3524 0.0393 Uiso 1.0000 . . H H241 0.6065 0.1214 0.4085 0.0447 Uiso 1.0000 . . H H261 0.6799 0.1001 0.5095 0.0886 Uiso 1.0000 . . H H263 0.5951 0.1616 0.4833 0.0880 Uiso 1.0000 . . H H262 0.5893 0.0198 0.5113 0.0878 Uiso 1.0000 . . H H271 0.7562 -0.1207 0.4801 0.1025 Uiso 1.0000 . . H H273 0.7216 -0.1943 0.4357 0.1020 Uiso 1.0000 . . H H272 0.6645 -0.2019 0.4808 0.1027 Uiso 1.0000 . . H H291 0.9267 0.1242 0.3103 0.0351 Uiso 1.0000 . . H H211 0.5707 0.2133 0.2842 0.0526 Uiso 1.0000 . . H H101 0.9842 0.6299 0.1553 0.0544 Uiso 1.0000 . . H H301 0.9064 -0.0397 0.3648 0.0578 Uiso 1.0000 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0172(5) 0.0397(6) 0.0357(6) 0.0002(4) 0.0001(4) 0.0033(5) C2 0.0216(7) 0.0330(9) 0.0283(8) -0.0023(6) 0.0008(6) -0.0033(7) C3 0.0220(7) 0.0323(8) 0.0295(8) -0.0012(6) -0.0005(6) -0.0042(7) C4 0.0207(7) 0.0344(8) 0.0303(8) -0.0001(6) 0.0005(6) -0.0060(7) O5 0.0177(5) 0.0478(7) 0.0447(7) -0.0010(5) -0.0011(5) 0.0055(6) C6 0.0213(7) 0.0333(8) 0.0277(8) -0.0005(6) 0.0000(6) -0.0045(6) C7 0.0215(7) 0.0320(8) 0.0288(8) 0.0007(6) -0.0009(6) -0.0023(7) C8 0.0171(6) 0.0392(9) 0.0357(9) -0.0008(6) -0.0007(6) -0.0030(7) C9 0.0242(7) 0.0370(9) 0.0309(8) -0.0037(6) 0.0018(6) -0.0036(7) O10 0.0231(5) 0.0468(7) 0.0385(7) -0.0043(5) -0.0014(5) 0.0069(5) C11 0.0255(7) 0.0330(8) 0.0290(8) 0.0002(6) -0.0016(6) -0.0030(7) C12 0.0215(7) 0.0351(9) 0.0292(8) 0.0012(6) -0.0009(6) -0.0053(7) C13 0.0209(7) 0.0373(9) 0.0335(8) 0.0041(6) -0.0001(6) 0.0011(7) C14 0.0191(7) 0.0415(9) 0.0381(9) 0.0006(6) 0.0003(6) -0.0012(8) C15 0.0220(7) 0.0669(13) 0.0358(9) 0.0017(7) -0.0005(7) 0.0024(9) C16 0.0424(10) 0.0754(15) 0.0545(13) 0.0110(10) -0.0030(9) 0.0238(12) C17 0.0384(10) 0.111(2) 0.0411(12) -0.0001(11) -0.0084(9) -0.0129(13) O18 0.0296(5) 0.0420(6) 0.0351(6) 0.0015(5) -0.0008(5) 0.0037(5) C19 0.0322(9) 0.0691(13) 0.0319(9) -0.0004(8) -0.0003(7) 0.0081(9) C20 0.0205(7) 0.0361(8) 0.0309(8) -0.0021(6) 0.0009(6) -0.0076(7) O21 0.0185(5) 0.0470(7) 0.0391(7) -0.0024(4) 0.0005(4) 0.0046(5) C22 0.0272(7) 0.0342(9) 0.0292(8) -0.0025(6) 0.0003(6) -0.0042(7) C23 0.0267(7) 0.0386(9) 0.0357(9) -0.0044(6) -0.0003(6) 0.0009(8) C24 0.0295(8) 0.0401(10) 0.0413(10) -0.0016(7) 0.0025(7) 0.0018(8) C25 0.0381(9) 0.0531(11) 0.0410(10) -0.0053(8) 0.0000(8) -0.0002(9) C26 0.0679(14) 0.0683(15) 0.0405(11) -0.0041(11) 0.0055(10) -0.0038(11) C27 0.0864(18) 0.0722(17) 0.0479(13) 0.0185(13) -0.0092(12) 0.0084(12) C28 0.0278(7) 0.0343(9) 0.0305(8) 0.0011(6) -0.0035(6) -0.0018(7) C29 0.0190(7) 0.0389(9) 0.0354(9) 0.0008(6) -0.0015(6) -0.0028(7) O30 0.0273(5) 0.0451(7) 0.0439(7) 0.0007(5) -0.0033(5) 0.0092(6) loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C 0.0181 0.0091 'International Tables Vol C 4.2.6.8 and 6.1.1.4' H 0.0000 0.0000 'International Tables Vol C 4.2.6.8 and 6.1.1.4' O 0.0492 0.0322 'International Tables Vol C 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C2 O1 C7 . . . 119.65(12) no O1 C2 C3 . . . 120.84(14) no O1 C2 C29 . . . 116.34(13) no C3 C2 C29 . . . 122.82(15) no C2 C3 C4 . . . 121.52(14) no C2 C3 C20 . . . 116.82(14) no C4 C3 C20 . . . 121.63(13) no C3 C4 O5 . . . 119.99(14) no C3 C4 C6 . . . 116.46(13) no O5 C4 C6 . . . 123.55(15) no C4 C6 C7 . . . 117.42(14) no C4 C6 C12 . . . 125.15(13) no C7 C6 C12 . . . 117.41(14) no C6 C7 O1 . . . 123.98(14) no C6 C7 C8 . . . 122.89(15) no O1 C7 C8 . . . 113.13(13) no C7 C8 C9 . . . 119.11(14) no C7 C8 H81 . . . 120.3 no C9 C8 H81 . . . 120.6 no C8 C9 O10 . . . 122.51(14) no C8 C9 C11 . . . 120.06(14) no O10 C9 C11 . . . 117.42(15) no C9 O10 H101 . . . 106.6 no C9 C11 C12 . . . 121.07(15) no C9 C11 O18 . . . 119.40(14) no C12 C11 O18 . . . 119.33(13) no C6 C12 C11 . . . 119.42(13) no C6 C12 C13 . . . 123.81(14) no C11 C12 C13 . . . 116.76(14) no C12 C13 C14 . . . 110.75(13) no C12 C13 H131 . . . 107.6 no C14 C13 H131 . . . 111.4 no C12 C13 H132 . . . 109.2 no C14 C13 H132 . . . 109.7 no H131 C13 H132 . . . 108.1 no C13 C14 C15 . . . 127.45(17) no C13 C14 H141 . . . 114.8 no C15 C14 H141 . . . 117.7 no C14 C15 C16 . . . 125.16(19) no C14 C15 C17 . . . 119.7(2) no C16 C15 C17 . . . 115.16(19) no C15 C16 H161 . . . 110.2 no C15 C16 H163 . . . 111.4 no H161 C16 H163 . . . 109.5 no C15 C16 H162 . . . 109.7 no H161 C16 H162 . . . 106.6 no H163 C16 H162 . . . 109.4 no C15 C17 H171 . . . 110.1 no C15 C17 H173 . . . 108.5 no H171 C17 H173 . . . 107.0 no C15 C17 H172 . . . 112.2 no H171 C17 H172 . . . 110.8 no H173 C17 H172 . . . 108.1 no C11 O18 C19 . . . 114.47(14) no O18 C19 H191 . . . 109.2 no O18 C19 H193 . . . 112.0 no H191 C19 H193 . . . 108.6 no O18 C19 H192 . . . 109.6 no H191 C19 H192 . . . 108.1 no H193 C19 H192 . . . 109.2 no C3 C20 O21 . . . 118.21(14) no C3 C20 C22 . . . 122.61(14) no O21 C20 C22 . . . 119.18(14) no C20 O21 H211 . . . 105.7 no C20 C22 C23 . . . 121.94(14) no C20 C22 C28 . . . 117.05(15) no C23 C22 C28 . . . 121.00(15) no C22 C23 C24 . . . 112.16(14) no C22 C23 H231 . . . 109.8 no C24 C23 H231 . . . 111.0 no C22 C23 H232 . . . 108.3 no C24 C23 H232 . . . 108.8 no H231 C23 H232 . . . 106.7 no C23 C24 C25 . . . 127.89(18) no C23 C24 H241 . . . 116.0 no C25 C24 H241 . . . 116.1 no C24 C25 C26 . . . 120.8(2) no C24 C25 C27 . . . 124.3(2) no C26 C25 C27 . . . 114.9(2) no C25 C26 H261 . . . 110.8 no C25 C26 H263 . . . 112.1 no H261 C26 H263 . . . 109.3 no C25 C26 H262 . . . 109.4 no H261 C26 H262 . . . 105.7 no H263 C26 H262 . . . 109.4 no C25 C27 H271 . . . 108.1 no C25 C27 H273 . . . 111.9 no H271 C27 H273 . . . 110.9 no C25 C27 H272 . . . 108.6 no H271 C27 H272 . . . 107.7 no H273 C27 H272 . . . 109.6 no C22 C28 C29 . . . 122.40(15) no C22 C28 O30 . . . 116.51(15) no C29 C28 O30 . . . 121.09(14) no C28 C29 C2 . . . 118.29(13) no C28 C29 H291 . . . 121.4 no C2 C29 H291 . . . 120.3 no C28 O30 H301 . . . 109.3 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C2 . . 1.3644(19) no O1 C7 . . 1.370(2) no C2 C3 . . 1.395(2) no C2 C29 . . 1.376(2) no C3 C4 . . 1.446(2) no C3 C20 . . 1.418(2) no C4 O5 . . 1.2540(19) no C4 C6 . . 1.464(2) no C6 C7 . . 1.408(2) no C6 C12 . . 1.424(2) no C7 C8 . . 1.384(2) no C8 C9 . . 1.373(2) no C8 H81 . . 0.941 no C9 O10 . . 1.3550(19) no C9 C11 . . 1.413(2) no O10 H101 . . 0.837 no C11 C12 . . 1.387(2) no C11 O18 . . 1.377(2) no C12 C13 . . 1.5284(19) no C13 C14 . . 1.503(2) no C13 H131 . . 0.950 no C13 H132 . . 0.944 no C14 C15 . . 1.330(3) no C14 H141 . . 0.957 no C15 C16 . . 1.503(3) no C15 C17 . . 1.509(3) no C16 H161 . . 0.979 no C16 H163 . . 0.972 no C16 H162 . . 0.968 no C17 H171 . . 0.962 no C17 H173 . . 0.972 no C17 H172 . . 0.999 no O18 C19 . . 1.429(2) no C19 H191 . . 0.957 no C19 H193 . . 0.954 no C19 H192 . . 0.969 no C20 O21 . . 1.3594(17) no C20 C22 . . 1.385(2) no O21 H211 . . 0.849 no C22 C23 . . 1.513(2) no C22 C28 . . 1.409(2) no C23 C24 . . 1.503(3) no C23 H231 . . 0.977 no C23 H232 . . 0.961 no C24 C25 . . 1.326(3) no C24 H241 . . 0.947 no C25 C26 . . 1.503(3) no C25 C27 . . 1.499(3) no C26 H261 . . 0.959 no C26 H263 . . 0.982 no C26 H262 . . 0.969 no C27 H271 . . 0.952 no C27 H273 . . 0.974 no C27 H272 . . 0.972 no C28 C29 . . 1.388(2) no C28 O30 . . 1.360(2) no C29 H291 . . 0.928 no O30 H301 . . 0.860 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_D _geom_hbond_site_symmetry_H _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C13 H132 O5 . . . 0.94 2.24 2.885(3) 125 yes C14 H141 O10 . . 3_645 0.96 2.36 3.304(3) 168 yes O21 H211 C4 . . . 0.85 2.28 2.820(3) 122 no O21 H211 O5 . . . 0.85 1.71 2.499(3) 155 yes O10 H101 O21 . . 8_555 0.84 1.88 2.691(3) 164 yes O30 H301 C14 . . 8_545 0.86 2.56 3.424(3) 178 no O30 H301 C15 . . 8_545 0.86 2.38 3.160(3) 150 no O30 H301 CgA . . . 0.86 2.38 3.227(3) 166 yes _cod_database_fobs_code 2228456