#------------------------------------------------------------------------------ #$Date: 2017-10-13 12:31:46 +0300 (Fri, 13 Oct 2017) $ #$Revision: 201979 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/23/32/2233222.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2233222 loop_ _publ_author_name 'Brito, Iv\'an' 'B\'orquez, Jorge' 'Simirgiotis, Mario' 'C\'ardenas, Alejandro' 'L\'opez-Rodr\'iguez, Mat\'ias' _publ_section_title ; 4',5-Dihydroxy-7-methoxyflavanone dihydrate ; _journal_coeditor_code KJ2193 _journal_issue 1 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o32 _journal_page_last o33 _journal_paper_doi 10.1107/S1600536811051221 _journal_volume 68 _journal_year 2012 _chemical_formula_moiety 'C16 H14 O5, 2H2 O' _chemical_formula_sum 'C16 H18 O7' _chemical_formula_weight 322.30 _chemical_name_systematic ; 5-hydroxy-2-(4-hydroxyphenyl)-7-methoxychroman-4-one dihydrate ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.0869(10) _cell_length_b 9.4622(19) _cell_length_c 32.318(7) _cell_measurement_reflns_used 2419 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 28.40 _cell_measurement_theta_min 3.30 _cell_volume 1555.6(6) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'COLLECT (Nonius, 2000' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'PLATON (Spek, 2009)' _computing_publication_material ; WinGX (Farrugia, 1999) and publCIF (Westrip, 2010) ; _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.889 _diffrn_measured_fraction_theta_max 0.878 _diffrn_measurement_device_type 'Nonius KappaCCD area-detector' _diffrn_measurement_method '\f and \w scans with \k offsets' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0676 _diffrn_reflns_av_sigmaI/netI 0.0652 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 42 _diffrn_reflns_limit_l_min -40 _diffrn_reflns_number 9743 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 28.40 _diffrn_reflns_theta_min 3.32 _exptl_absorpt_coefficient_mu 0.109 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.376 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 680 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.15 _exptl_crystal_size_min 0.03 _refine_diff_density_max 0.380 _refine_diff_density_min -0.286 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.170 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 224 _refine_ls_number_reflns 2021 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.170 _refine_ls_R_factor_all 0.0945 _refine_ls_R_factor_gt 0.0752 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0649P)^2^+1.4205P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1697 _refine_ls_wR_factor_ref 0.1798 _reflns_number_gt 1623 _reflns_number_total 2021 _reflns_threshold_expression I>2\s(I) _cod_data_source_file kj2193.cif _cod_data_source_block I _cod_original_cell_volume 1555.6(5) _cod_database_code 2233222 _cod_database_fobs_code 2233222 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_symmetry_multiplicity O O1 0.1698(7) 0.3272(3) 0.39766(8) 0.0317(8) Uani d . 1 1 O O2 -0.3650(7) 0.5120(4) 0.31855(10) 0.0370(9) Uani d . 1 1 O O3 -0.1585(7) 0.3656(4) 0.25747(9) 0.0350(8) Uani d . 1 1 H H3 -0.2576 0.4224 0.2686 0.053 Uiso calc R 1 1 O O4 0.5380(7) 0.0576(4) 0.28692(9) 0.0341(8) Uani d . 1 1 O O5 0.1305(11) 0.5341(6) 0.58135(12) 0.0610(15) Uani d . 1 1 H H5 0.247(18) 0.564(8) 0.593(2) 0.07(3) Uiso d . 1 1 C C2 0.0708(9) 0.4690(5) 0.40716(13) 0.0266(10) Uani d . 1 1 H H2 0.1893 0.5381 0.3945 0.032 Uiso calc R 1 1 C C3 -0.2023(9) 0.4877(6) 0.38806(13) 0.0345(12) Uani d . 1 1 H H3A -0.3254 0.4250 0.4018 0.041 Uiso calc R 1 1 H H3B -0.2613 0.5840 0.3924 0.041 Uiso calc R 1 1 C C4 -0.2002(9) 0.4562(5) 0.34223(13) 0.0265(10) Uani d . 1 1 C C10 -0.0071(9) 0.3561(5) 0.32828(12) 0.0247(9) Uani d . 1 1 C C5 0.0125(9) 0.3128(5) 0.28607(12) 0.0248(10) Uani d . 1 1 C C6 0.1952(10) 0.2153(5) 0.27344(13) 0.0278(10) Uani d . 1 1 H H6 0.2063 0.1899 0.2457 0.033 Uiso calc R 1 1 C C7 0.3658(9) 0.1537(5) 0.30263(13) 0.0251(9) Uani d . 1 1 C C8 0.3505(9) 0.1902(5) 0.34455(13) 0.0267(9) Uani d . 1 1 H H8 0.4586 0.1465 0.3639 0.032 Uiso calc R 1 1 C C9 0.1720(8) 0.2925(5) 0.35667(12) 0.0221(9) Uani d . 1 1 C C1' 0.0839(9) 0.4870(5) 0.45324(13) 0.0265(10) Uani d . 1 1 C C2' -0.0739(11) 0.4059(6) 0.48002(14) 0.0379(12) Uani d . 1 1 H H2' -0.1923 0.3410 0.4691 0.046 Uiso calc R 1 1 C C3' -0.0542(12) 0.4220(6) 0.52256(15) 0.0439(14) Uani d . 1 1 H H3' -0.1581 0.3673 0.5400 0.053 Uiso calc R 1 1 C C4' 0.1203(10) 0.5197(6) 0.53925(13) 0.0367(12) Uani d . 1 1 C C5' 0.2769(12) 0.6004(6) 0.51347(15) 0.0441(14) Uani d . 1 1 H H5' 0.3940 0.6656 0.5246 0.053 Uiso calc R 1 1 C C6' 0.2585(11) 0.5837(6) 0.47061(14) 0.0361(12) Uani d . 1 1 H H6' 0.3645 0.6381 0.4534 0.043 Uiso calc R 1 1 C C11 0.7076(11) -0.0153(6) 0.31527(15) 0.0364(12) Uani d . 1 1 H H11A 0.6039 -0.0734 0.3334 0.055 Uiso calc R 1 1 H H11B 0.8043 0.0523 0.3314 0.055 Uiso calc R 1 1 H H11C 0.8280 -0.0737 0.3001 0.055 Uiso calc R 1 1 O O6 0.2193(9) 0.7134(5) 0.32036(13) 0.0500(11) Uani d . 1 1 H H6A 0.354(18) 0.659(8) 0.316(2) 0.07(2) Uiso d . 1 1 H H6B 0.209(15) 0.761(6) 0.2996(19) 0.06(2) Uiso d . 1 1 O O7 0.5931(9) 0.6486(6) 0.60698(12) 0.0586(13) Uani d G 1 1 H H7A 0.7450 0.6441 0.5961 0.088 Uiso d G 1 1 H H7B 0.6306 0.6736 0.6315 0.088 Uiso d G 1 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0332(19) 0.0370(19) 0.0248(15) 0.0105(18) -0.0035(13) -0.0066(13) O2 0.0244(17) 0.046(2) 0.0406(18) 0.0133(18) -0.0064(14) 0.0006(16) O3 0.0334(19) 0.039(2) 0.0324(16) 0.0081(19) -0.0069(14) 0.0014(14) O4 0.0292(18) 0.041(2) 0.0324(16) 0.0126(17) -0.0009(14) -0.0085(14) O5 0.061(3) 0.096(4) 0.0258(18) -0.028(3) 0.0028(19) -0.006(2) C2 0.018(2) 0.032(2) 0.030(2) 0.001(2) 0.0035(17) -0.0057(18) C3 0.022(2) 0.044(3) 0.038(2) 0.012(3) 0.0049(19) -0.006(2) C4 0.018(2) 0.029(2) 0.032(2) 0.000(2) -0.0033(18) 0.0001(18) C10 0.018(2) 0.028(2) 0.028(2) -0.001(2) 0.0005(17) -0.0006(17) C5 0.023(2) 0.027(2) 0.025(2) -0.005(2) -0.0066(17) 0.0041(17) C6 0.032(2) 0.031(2) 0.0204(19) 0.002(2) 0.0008(18) -0.0029(17) C7 0.017(2) 0.026(2) 0.032(2) 0.002(2) 0.0021(17) -0.0008(18) C8 0.023(2) 0.031(2) 0.026(2) 0.002(2) -0.0012(17) 0.0009(18) C9 0.0115(18) 0.029(2) 0.0259(19) -0.0042(19) -0.0017(15) -0.0002(17) C1' 0.022(2) 0.029(2) 0.028(2) -0.001(2) -0.0004(17) -0.0030(18) C2' 0.032(3) 0.048(3) 0.033(2) -0.008(3) -0.002(2) -0.006(2) C3' 0.039(3) 0.054(4) 0.039(3) -0.012(3) 0.012(2) 0.003(2) C4' 0.034(3) 0.050(3) 0.027(2) -0.001(3) 0.005(2) 0.000(2) C5' 0.039(3) 0.057(4) 0.036(3) -0.008(3) -0.003(2) -0.009(2) C6' 0.029(3) 0.047(3) 0.031(2) -0.012(2) 0.0050(19) -0.001(2) C11 0.027(3) 0.040(3) 0.042(3) 0.014(3) 0.000(2) -0.001(2) O6 0.048(3) 0.058(3) 0.044(2) 0.020(2) 0.007(2) 0.001(2) O7 0.049(3) 0.084(3) 0.042(2) -0.008(3) -0.0053(19) -0.007(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C9 O1 C2 115.3(3) C5 O3 H3 109.5 C7 O4 C11 118.0(4) C4' O5 H5 123(6) O1 C2 C1' 107.3(4) O1 C2 C3 109.5(4) C1' C2 C3 115.3(4) O1 C2 H2 108.2 C1' C2 H2 108.2 C3 C2 H2 108.2 C4 C3 C2 111.5(4) C4 C3 H3A 109.3 C2 C3 H3A 109.3 C4 C3 H3B 109.3 C2 C3 H3B 109.3 H3A C3 H3B 108.0 O2 C4 C10 123.0(4) O2 C4 C3 120.7(4) C10 C4 C3 116.3(4) C9 C10 C5 116.7(4) C9 C10 C4 120.9(4) C5 C10 C4 122.4(4) O3 C5 C6 118.5(4) O3 C5 C10 119.9(4) C6 C5 C10 121.6(4) C5 C6 C7 119.8(4) C5 C6 H6 120.1 C7 C6 H6 120.1 O4 C7 C8 124.2(4) O4 C7 C6 115.0(4) C8 C7 C6 120.8(4) C9 C8 C7 118.9(4) C9 C8 H8 120.6 C7 C8 H8 120.6 O1 C9 C8 116.7(4) O1 C9 C10 121.2(4) C8 C9 C10 122.2(4) C6' C1' C2' 118.3(4) C6' C1' C2 120.2(4) C2' C1' C2 121.5(4) C3' C2' C1' 120.6(5) C3' C2' H2' 119.7 C1' C2' H2' 119.7 C2' C3' C4' 120.2(5) C2' C3' H3' 119.9 C4' C3' H3' 119.9 O5 C4' C5' 121.5(5) O5 C4' C3' 118.4(5) C5' C4' C3' 120.1(5) C4' C5' C6' 119.8(5) C4' C5' H5' 120.1 C6' C5' H5' 120.1 C1' C6' C5' 121.1(4) C1' C6' H6' 119.5 C5' C6' H6' 119.5 O4 C11 H11A 109.5 O4 C11 H11B 109.5 H11A C11 H11B 109.5 O4 C11 H11C 109.5 H11A C11 H11C 109.5 H11B C11 H11C 109.5 H6A O6 H6B 105(6) H7A O7 H7B 101.2 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C9 1.365(5) O1 C2 1.465(5) O2 C4 1.252(5) O3 C5 1.364(5) O3 H3 0.8200 O4 C7 1.361(5) O4 C11 1.435(6) O5 C4' 1.369(6) O5 H5 0.75(8) C2 C1' 1.501(6) C2 C3 1.530(6) C2 H2 0.9800 C3 C4 1.511(6) C3 H3A 0.9700 C3 H3B 0.9700 C4 C10 1.437(6) C10 C9 1.426(6) C10 C5 1.427(6) C5 C6 1.372(6) C6 C7 1.408(6) C6 H6 0.9300 C7 C8 1.400(6) C8 C9 1.383(6) C8 H8 0.9300 C1' C6' 1.393(6) C1' C2' 1.408(7) C2' C3' 1.387(7) C2' H2' 0.9300 C3' C4' 1.391(7) C3' H3' 0.9300 C4' C5' 1.382(7) C5' C6' 1.397(6) C5' H5' 0.9300 C6' H6' 0.9300 C11 H11A 0.9600 C11 H11B 0.9600 C11 H11C 0.9600 O6 H6A 0.87(9) O6 H6B 0.81(6) O7 H7A 0.8500 O7 H7B 0.8501 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H3 O2 . 0.82 1.90 2.630(5) 147 y O5 H5 O7 . 0.76(9) 1.99(9) 2.720(7) 163(7) y O6 H6A O2 1_655 0.87(9) 2.00(8) 2.847(6) 166(7) y O6 H6B O3 3_555 0.81(6) 2.11(6) 2.915(5) 174(8) y O7 H7A O5 1_655 0.85 2.27 3.055(7) 153 y O7 H7B O6 4_566 0.85 1.94 2.763(6) 163 y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C9 O1 C2 C1' -180.0(4) C9 O1 C2 C3 54.2(5) O1 C2 C3 C4 -54.4(5) C1' C2 C3 C4 -175.4(4) C2 C3 C4 O2 -153.5(5) C2 C3 C4 C10 28.6(6) O2 C4 C10 C9 -178.3(4) C3 C4 C10 C9 -0.5(6) O2 C4 C10 C5 0.3(7) C3 C4 C10 C5 178.0(4) C9 C10 C5 O3 177.7(4) C4 C10 C5 O3 -0.9(7) C9 C10 C5 C6 -0.2(6) C4 C10 C5 C6 -178.8(4) O3 C5 C6 C7 -176.9(4) C10 C5 C6 C7 1.1(7) C11 O4 C7 C8 2.6(7) C11 O4 C7 C6 -176.5(4) C5 C6 C7 O4 179.5(4) C5 C6 C7 C8 0.4(7) O4 C7 C8 C9 178.2(4) C6 C7 C8 C9 -2.7(7) C2 O1 C9 C8 155.2(4) C2 O1 C9 C10 -26.6(6) C7 C8 C9 O1 -178.2(4) C7 C8 C9 C10 3.6(6) C5 C10 C9 O1 179.7(4) C4 C10 C9 O1 -1.7(6) C5 C10 C9 C8 -2.2(6) C4 C10 C9 C8 176.4(4) O1 C2 C1' C6' 112.6(5) C3 C2 C1' C6' -125.2(5) O1 C2 C1' C2' -66.1(6) C3 C2 C1' C2' 56.1(6) C6' C1' C2' C3' -0.3(8) C2 C1' C2' C3' 178.5(5) C1' C2' C3' C4' 0.6(8) C2' C3' C4' O5 178.9(5) C2' C3' C4' C5' -0.6(9) O5 C4' C5' C6' -179.3(5) C3' C4' C5' C6' 0.2(9) C2' C1' C6' C5' -0.1(8) C2 C1' C6' C5' -178.9(5) C4' C5' C6' C1' 0.2(9) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 30657342