#------------------------------------------------------------------------------
#$Date: 2025-01-28 09:49:11 +0200 (Tue, 28 Jan 2025) $
#$Revision: 297499 $
#$URL: file:///home/coder/svn-repositories/cod/cif/2/30/04/2300437.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/. The original data for this entry
# were provided the Crystal Eye server at
# http://wwmm.ch.cam.ac.uk/crystaleye/, created by Nick Day at the
# Peter Murray-Rust laboratory.
#
# The file may be used within the scientific community so long as
# proper attribution is given to the journal article from which the
# data were obtained.
#
data_2300437
loop_
_publ_author_name
'Eccles, Kevin S.'
'Stokes, Stephen P.'
'Daly, Carla A.'
'Barry, Nicola M.'
'McSweeney, Sharon P.'
'O'Neill, Damian J.'
'Kelly, Dawn M.'
'Jennings, W. Brian'
'Ní Dhubhghaill, O. M.'
'Moynihan, Humphrey A.'
'Maguire, Anita R.'
'Lawrence, Simon E.'
_publ_section_title
;
 Evaluation of the Bruker SMART X2S: crystallography for the
 nonspecialist?
;
_journal_coden_ASTM              JACGAR
_journal_coeditor_code           KK5074
_journal_issue                   1
_journal_name_full               'Journal of Applied Crystallography'
_journal_page_first              213
_journal_page_last               215
_journal_paper_doi               10.1107/S0021889810042561
_journal_volume                  44
_journal_year                    2011
_chemical_formula_moiety         '(C7 H7 N S), (C18 H15 O P)'
_chemical_formula_sum            'C25 H22 N O P S'
_chemical_formula_weight         415.47
_space_group_IT_number           2
_symmetry_cell_setting           triclinic
_symmetry_space_group_name_Hall  '-P 1'
_symmetry_space_group_name_H-M   'P -1'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_atom_sites_solution_secondary   difmap
_audit_creation_method           SHELXL-97
_cell_angle_alpha                85.945(3)
_cell_angle_beta                 67.750(3)
_cell_angle_gamma                70.671(3)
_cell_formula_units_Z            2
_cell_length_a                   10.2699(10)
_cell_length_b                   11.1605(10)
_cell_length_c                   11.1911(12)
_cell_measurement_reflns_used    3717
_cell_measurement_temperature    300(2)
_cell_measurement_theta_max      24.96
_cell_measurement_theta_min      2.38
_cell_volume                     1118.07(19)
_computing_cell_refinement       'Bruker SAINT'
_computing_data_collection       'Bruker GIS'
_computing_data_reduction        'Bruker SAINT'
_computing_molecular_graphics    'Bruker APEX2'
_computing_structure_refinement  'SHELXL-97 (Sheldrick, 2008)'
_computing_structure_solution    'SHELXS-97 (Sheldrick, 2008)'
_diffrn_ambient_temperature      300(2)
_diffrn_measured_fraction_theta_full 0.990
_diffrn_measured_fraction_theta_max 0.990
_diffrn_measurement_device_type  'Bruker SMART X2S'
_diffrn_measurement_method       'ω scans'
_diffrn_radiation_monochromator  'doubly curved silicon crystal'
_diffrn_radiation_source         'micro-focus sealed tube'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0348
_diffrn_reflns_av_sigmaI/netI    0.0373
_diffrn_reflns_limit_h_max       12
_diffrn_reflns_limit_h_min       -12
_diffrn_reflns_limit_k_max       13
_diffrn_reflns_limit_k_min       -13
_diffrn_reflns_limit_l_max       13
_diffrn_reflns_limit_l_min       -13
_diffrn_reflns_number            11064
_diffrn_reflns_theta_full        25.01
_diffrn_reflns_theta_max         25.01
_diffrn_reflns_theta_min         1.94
_exptl_absorpt_coefficient_mu    0.232
_exptl_absorpt_correction_T_max  0.9772
_exptl_absorpt_correction_T_min  0.9029
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   'SADABS V2008/1 (Bruker AXS)'
_exptl_crystal_colour            yellow
_exptl_crystal_density_diffrn    1.234
_exptl_crystal_density_method    'not measured'
_exptl_crystal_description       plate
_exptl_crystal_F_000             436
_exptl_crystal_size_max          0.45
_exptl_crystal_size_mid          0.21
_exptl_crystal_size_min          0.10
_refine_diff_density_max         0.268
_refine_diff_density_min         -0.293
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.008
_refine_ls_hydrogen_treatment    mixed
_refine_ls_matrix_type           full
_refine_ls_number_parameters     268
_refine_ls_number_reflns         3902
_refine_ls_number_restraints     3
_refine_ls_restrained_S_all      1.008
_refine_ls_R_factor_all          0.0594
_refine_ls_R_factor_gt           0.0400
_refine_ls_shift/su_max          0.044
_refine_ls_shift/su_mean         0.008
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'calc w=1/[σ²(Fo²)+(0.0955P)²+0.1430P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1145
_refine_ls_wR_factor_ref         0.1462
_reflns_number_gt                3000
_reflns_number_total             3902
_reflns_threshold_expression     >2sigma(I)
_cod_duplicate_entry             2300347
_cod_data_source_file            kk5074sup1.cif
_cod_data_source_block           Compound_17_X2S
_cod_depositor_comments
;
The following automatic conversions were performed:

'_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic'
according to /home/saulius/struct/CIF-dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26.

Automatic conversion script
Id: cif_fix_values 1891 2012-01-12 08:04:46Z andrius 
;
_cod_original_sg_symbol_H-M      P-1
_cod_database_code               2300437
loop_
_symmetry_equiv_pos_as_xyz
'x, y, z'
'-x, -y, -z'
loop_
_atom_site_type_symbol
_atom_site_label
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_calc_flag
_atom_site_refinement_flags
_atom_site_occupancy
S S1 0.00828(8) 0.95842(7) -0.19544(8) 0.0627(3) Uani d . 1
P P1 0.36154(6) 0.31287(5) 0.14058(5) 0.0362(2) Uani d . 1
O O1 0.52110(17) 0.30414(16) 0.07717(15) 0.0467(4) Uani d . 1
N N1 0.2045(3) 0.8498(2) -0.0915(3) 0.0606(6) Uani d D 1
H H@2 0.285(2) 0.798(2) -0.090(3) 0.091 Uiso d D 1
H H@1 0.168(3) 0.9166(19) -0.043(3) 0.091 Uiso d D 1
C C1 0.2110(4) 0.1848(3) -0.1506(3) 0.0648(8) Uani d . 1
H H1 0.1825 0.1570 -0.2102 0.078 Uiso calc R 1
C C2 0.1128(3) 0.2845(3) -0.0630(3) 0.0609(7) Uani d . 1
H H2 0.0180 0.3242 -0.0638 0.073 Uiso calc R 1
C C3 0.1537(3) 0.3264(3) 0.0264(2) 0.0503(6) Uani d . 1
H H3 0.0864 0.3943 0.0853 0.060 Uiso calc R 1
C C4 0.2954(3) 0.2674(2) 0.0285(2) 0.0396(5) Uani d . 1
C C5 0.3317(2) 0.2103(2) 0.2735(2) 0.0384(5) Uani d . 1
C C6 0.3982(3) 0.2117(2) 0.3614(2) 0.0460(6) Uani d . 1
H H6 0.4568 0.2631 0.3492 0.055 Uiso calc R 1
C C7 0.3771(3) 0.1366(3) 0.4667(2) 0.0573(7) Uani d . 1
H H7 0.4204 0.1384 0.5257 0.069 Uiso calc R 1
C C8 0.2922(3) 0.0596(3) 0.4838(3) 0.0615(8) Uani d . 1
H H8 0.2790 0.0087 0.5539 0.074 Uiso calc R 1
C C9 0.2431(2) 0.4710(2) 0.2101(2) 0.0378(5) Uani d . 1
C C10 0.1001(3) 0.4957(2) 0.3045(2) 0.0493(6) Uani d . 1
H H10 0.0619 0.4295 0.3332 0.059 Uiso calc R 1
C C11 0.0151(3) 0.6191(3) 0.3553(3) 0.0597(7) Uani d . 1
H H11 -0.0802 0.6358 0.4182 0.072 Uiso calc R 1
C C12 0.0718(3) 0.7172(3) 0.3125(3) 0.0628(8) Uani d . 1
H H12 0.0146 0.7999 0.3468 0.075 Uiso calc R 1
C C13 0.2118(3) 0.6934(3) 0.2198(3) 0.0647(8) Uani d . 1
H H13 0.2494 0.7599 0.1913 0.078 Uiso calc R 1
C C14 0.2975(3) 0.5707(2) 0.1684(2) 0.0514(6) Uani d . 1
H H14 0.3926 0.5552 0.1053 0.062 Uiso calc R 1
C C15 0.3506(4) 0.1261(3) -0.1503(3) 0.0711(9) Uani d . 1
H H15 0.4169 0.0583 -0.2097 0.085 Uiso calc R 1
C C16 0.3938(3) 0.1671(3) -0.0621(3) 0.0583(7) Uani d . 1
H H16 0.4894 0.1273 -0.0633 0.070 Uiso calc R 1
C C17 0.2454(3) 0.1332(3) 0.2927(3) 0.0534(7) Uani d . 1
H H17 0.1997 0.1318 0.2354 0.064 Uiso calc R 1
C C18 0.2270(4) 0.0574(3) 0.3981(3) 0.0669(8) Uani d . 1
H H18 0.1698 0.0048 0.4104 0.080 Uiso calc R 1
C C19 0.3295(4) 0.4824(4) -0.3927(4) 0.0855(11) Uani d . 1
H H19 0.3675 0.4045 -0.4394 0.103 Uiso calc R 1
C C20 0.3365(4) 0.4882(3) -0.2736(3) 0.0743(9) Uani d . 1
H H20 0.3793 0.4143 -0.2392 0.089 Uiso calc R 1
C C21 0.2801(3) 0.6039(2) -0.2046(3) 0.0557(7) Uani d . 1
H H21 0.2858 0.6072 -0.1240 0.067 Uiso calc R 1
C C22 0.2148(3) 0.7154(2) -0.2536(2) 0.0451(6) Uani d . 1
C C23 0.1491(3) 0.8393(2) -0.1768(2) 0.0463(6) Uani d . 1
C C24 0.2667(4) 0.5905(4) -0.4427(3) 0.0868(11) Uani d . 1
H H24 0.2634 0.5860 -0.5241 0.104 Uiso calc R 1
C C25 0.2075(3) 0.7078(3) -0.3741(3) 0.0661(8) Uani d . 1
H H25 0.1631 0.7808 -0.4087 0.079 Uiso calc R 1
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
O1 P1 C9 111.94(10)
O1 P1 C4 111.57(10)
C9 P1 C4 108.71(10)
O1 P1 C5 111.91(10)
C9 P1 C5 105.33(10)
C4 P1 C5 107.06(11)
C23 N1 H@2 123(2)
C23 N1 H@1 120(2)
H@2 N1 H@1 116(3)
C15 C1 C2 120.1(3)
C15 C1 H1 120.0
C2 C1 H1 120.0
C1 C2 C3 120.5(3)
C1 C2 H2 119.7
C3 C2 H2 119.8
C2 C3 C4 120.2(2)
C2 C3 H3 119.9
C4 C3 H3 119.9
C3 C4 C16 118.3(2)
C3 C4 P1 124.37(18)
C16 C4 P1 117.32(18)
C17 C5 C6 119.1(2)
C17 C5 P1 123.27(18)
C6 C5 P1 117.58(18)
C7 C6 C5 120.2(2)
C7 C6 H6 119.9
C5 C6 H6 119.9
C8 C7 C6 120.0(3)
C8 C7 H7 120.0
C6 C7 H7 120.0
C18 C8 C7 120.3(2)
C18 C8 H8 119.9
C7 C8 H8 119.9
C14 C9 C10 119.2(2)
C14 C9 P1 118.32(17)
C10 C9 P1 122.51(19)
C11 C10 C9 119.8(2)
C11 C10 H10 120.1
C9 C10 H10 120.1
C12 C11 C10 120.1(2)
C12 C11 H11 120.0
C10 C11 H11 120.0
C13 C12 C11 120.3(3)
C13 C12 H12 119.8
C11 C12 H12 119.8
C12 C13 C14 120.2(3)
C12 C13 H13 119.9
C14 C13 H13 119.9
C13 C14 C9 120.5(2)
C13 C14 H14 119.7
C9 C14 H14 119.7
C1 C15 C16 120.2(3)
C1 C15 H15 119.9
C16 C15 H15 119.9
C15 C16 C4 120.6(3)
C15 C16 H16 119.7
C4 C16 H16 119.7
C5 C17 C18 119.8(2)
C5 C17 H17 120.1
C18 C17 H17 120.1
C8 C18 C17 120.7(3)
C8 C18 H18 119.7
C17 C18 H18 119.7
C24 C19 C20 119.9(3)
C24 C19 H19 120.1
C20 C19 H19 120.1
C19 C20 C21 120.0(3)
C19 C20 H20 120.0
C21 C20 H20 120.0
C20 C21 C22 121.0(3)
C20 C21 H21 119.5
C22 C21 H21 119.5
C25 C22 C21 118.3(3)
C25 C22 C23 120.8(2)
C21 C22 C23 120.9(2)
N1 C23 C22 116.6(2)
N1 C23 S1 121.5(2)
C22 C23 S1 121.87(18)
C19 C24 C25 121.1(3)
C19 C24 H24 119.5
C25 C24 H24 119.5
C22 C25 C24 119.7(3)
C22 C25 H25 120.2
C24 C25 H25 120.2
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
S1 C23 1.679(2)
P1 O1 1.4906(16)
P1 C9 1.804(2)
P1 C4 1.805(2)
P1 C5 1.806(2)
N1 C23 1.312(3)
N1 H@2 0.843(10)
N1 H@1 0.844(10)
C1 C15 1.366(4)
C1 C2 1.370(4)
C1 H1 0.9300
C2 C3 1.383(4)
C2 H2 0.9300
C3 C4 1.393(3)
C3 H3 0.9300
C4 C16 1.392(3)
C5 C17 1.381(3)
C5 C6 1.397(3)
C6 C7 1.388(4)
C6 H6 0.9300
C7 C8 1.371(4)
C7 H7 0.9300
C8 C18 1.367(4)
C8 H8 0.9300
C9 C14 1.382(3)
C9 C10 1.396(3)
C10 C11 1.386(4)
C10 H10 0.9300
C11 C12 1.380(4)
C11 H11 0.9300
C12 C13 1.367(4)
C12 H12 0.9300
C13 C14 1.382(4)
C13 H13 0.9300
C14 H14 0.9300
C15 C16 1.381(4)
C15 H15 0.9300
C16 H16 0.9300
C17 C18 1.391(4)
C17 H17 0.9300
C18 H18 0.9300
C19 C24 1.359(5)
C19 C20 1.370(5)
C19 H19 0.9300
C20 C21 1.380(4)
C20 H20 0.9300
C21 C22 1.389(4)
C21 H21 0.9300
C22 C25 1.388(4)
C22 C23 1.489(4)
C24 C25 1.392(5)
C24 H24 0.9300
C25 H25 0.9300
loop_
_cod_entry_issue_id
_cod_entry_issue_origin
_cod_entry_issue_severity
_cod_entry_issue_description
_cod_entry_issue_author
_cod_entry_issue_date
1 original note
;
 This entry describes a structure that was purposely solved automatically with
 minimal human intervention to investigate the capabilities of the Bruker SMART
 X2S benchtop crystallography instrument.
;
'Vaitkus, Antanas' 2025-01-28T09:42:58+02:00
