#------------------------------------------------------------------------------ #$Date: 2014-03-15 19:11:01 +0200 (Sat, 15 Mar 2014) $ #$Revision: 106732 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/02/91/4029155.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4029155 loop_ _publ_author_name 'Li, Jiang-Tao' 'Wang, Li-Xia' 'Wang, De-Xian' 'Zhao, Liang' 'Wang, Mei-Xiang' _publ_section_title ; Synthesis, Resolution, Structure, and Racemization of Inherently Chiral 1,3-Alternate Azacalix[4]pyrimidines: Quantification of Conformation Mobility. ; _journal_issue 5 _journal_name_full 'The Journal of organic chemistry' _journal_page_first 2178 _journal_page_last 2188 _journal_paper_doi 10.1021/jo500054v _journal_volume 79 _journal_year 2014 _chemical_formula_moiety 'C20 H16 Cl4 N12' _chemical_formula_sum 'C20 H16 Cl4 N12' _chemical_formula_weight 566.25 _chemical_name_systematic ; ? ; _space_group_IT_number 133 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall '-P 4ac 2b' _symmetry_space_group_name_H-M 'P 42/n b c :2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.0408(18) _cell_length_b 13.0408(18) _cell_length_c 13.176(3) _cell_measurement_reflns_used 345 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 2.17 _cell_volume 2240.7(7) _computing_cell_refinement 'CrystalClear (Rigaku Inc., 2008)' _computing_data_collection 'CrystalClear (Rigaku Inc., 2008)' _computing_data_reduction 'CrystalClear (Rigaku Inc., 2008)' _computing_molecular_graphics 'XP in Siemens SHELXTL (Sheldrick, 1994)' _computing_publication_material 'SHELX97 (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Saturn724+ CCD' _diffrn_measurement_method '\w scans at fixed \c = 45\%' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0362 _diffrn_reflns_av_sigmaI/netI 0.0123 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 16349 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.09 _exptl_absorpt_coefficient_mu 0.569 _exptl_absorpt_correction_T_max 0.9453 _exptl_absorpt_correction_T_min 0.8524 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'CrystalClear (Rigaku Inc., 2008)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.678 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 1152 _exptl_crystal_size_max 0.29 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.281 _refine_diff_density_min -0.205 _refine_diff_density_rms 0.049 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.323 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 83 _refine_ls_number_reflns 1288 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.323 _refine_ls_R_factor_all 0.0410 _refine_ls_R_factor_gt 0.0408 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0276P)^2^+1.9971P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0939 _refine_ls_wR_factor_ref 0.0940 _reflns_number_gt 1284 _reflns_number_total 1288 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file jo500054v_si_005.cif _[local]_cod_data_source_block sa130 _[local]_cod_cif_authors_sg_H-M P4(2)/nbc _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/current/ACS/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_original_cell_volume 2240.8(6) _cod_database_code 4029155 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y+1/2, z' '-y+1/2, x, z+1/2' 'y, -x+1/2, z+1/2' '-x+1/2, y, -z' 'x, -y+1/2, -z' 'y, x, -z+1/2' '-y+1/2, -x+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y-1/2, -z' 'y-1/2, -x, -z-1/2' '-y, x-1/2, -z-1/2' 'x-1/2, -y, z' '-x, y-1/2, z' '-y, -x, z-1/2' 'y-1/2, x-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Cl1 Cl 0.14763(4) 0.83863(4) 0.38027(3) 0.02665(17) Uani 1 1 d . N1 N 0.04306(13) 0.56848(13) 0.38705(12) 0.0235(4) Uani 1 1 d . N2 N -0.00690(12) 0.70092(12) 0.28238(12) 0.0214(4) Uani 1 1 d . N3 N -0.03488(13) 0.80910(13) 0.14288(13) 0.0249(4) Uani 1 1 d . C1 C 0.10659(16) 0.49112(15) 0.40718(15) 0.0263(4) Uani 1 1 d . H1A H 0.0895 0.4497 0.4641 0.032 Uiso 1 1 calc R C2 C 0.06116(14) 0.62398(14) 0.30312(14) 0.0200(4) Uani 1 1 d . C3 C -0.09695(15) 0.71372(15) 0.34885(16) 0.0260(4) Uani 1 1 d . H3A H -0.1319 0.6477 0.3566 0.039 Uiso 1 1 calc R H3B H -0.1441 0.7636 0.3186 0.039 Uiso 1 1 calc R H3C H -0.0746 0.7384 0.4155 0.039 Uiso 1 1 calc R C4 C 0.02094(14) 0.78985(14) 0.22595(14) 0.0211(4) Uani 1 1 d . C5 C 0.09711(14) 0.85526(14) 0.26012(14) 0.0205(4) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cl1 0.0320(3) 0.0282(3) 0.0197(3) 0.00459(18) -0.00489(18) -0.00390(19) N1 0.0246(8) 0.0232(8) 0.0226(8) 0.0041(6) 0.0041(7) -0.0002(7) N2 0.0191(8) 0.0210(8) 0.0239(8) 0.0036(6) 0.0024(6) -0.0002(6) N3 0.0210(8) 0.0264(8) 0.0274(8) 0.0039(7) -0.0033(7) -0.0020(7) C1 0.0300(10) 0.0221(9) 0.0267(10) 0.0054(8) 0.0052(8) -0.0002(8) C2 0.0196(9) 0.0196(8) 0.0209(9) 0.0001(7) 0.0008(7) -0.0032(7) C3 0.0219(9) 0.0258(10) 0.0302(10) 0.0032(8) 0.0056(8) 0.0022(7) C4 0.0199(9) 0.0212(9) 0.0220(9) 0.0018(7) 0.0020(7) 0.0018(7) C5 0.0194(9) 0.0229(9) 0.0190(9) 0.0015(7) -0.0017(7) 0.0029(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 C1 N1 C2 117.58(17) . . C2 N2 C4 122.44(16) . . C2 N2 C3 118.77(16) . . C4 N2 C3 114.88(15) . . C1 N3 C4 115.04(17) 11_566 . N3 C1 N1 127.60(18) 12_666 . N3 C1 H1A 116.2 12_666 . N1 C1 H1A 116.2 . . N1 C2 N2 116.50(17) . . N1 C2 C5 119.12(17) . 12_666 N2 C2 C5 124.31(17) . 12_666 N2 C3 H3A 109.5 . . N2 C3 H3B 109.5 . . H3A C3 H3B 109.5 . . N2 C3 H3C 109.5 . . H3A C3 H3C 109.5 . . H3B C3 H3C 109.5 . . N3 C4 C5 122.73(17) . . N3 C4 N2 116.16(17) . . C5 C4 N2 120.97(17) . . C4 C5 C2 117.41(17) . 11_566 C4 C5 Cl1 119.61(14) . . C2 C5 Cl1 122.77(14) 11_566 . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Cl1 C5 1.7285(19) . N1 C1 1.332(3) . N1 C2 1.342(2) . N2 C2 1.367(2) . N2 C4 1.425(2) . N2 C3 1.475(2) . N3 C1 1.326(3) 11_566 N3 C4 1.338(2) . C1 N3 1.326(3) 12_666 C1 H1A 0.9500 . C2 C5 1.416(3) 12_666 C3 H3A 0.9800 . C3 H3B 0.9800 . C3 H3C 0.9800 . C4 C5 1.384(3) . C5 C2 1.416(3) 11_566 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 C2 N1 C1 N3 4.5(3) . 12_666 C1 N1 C2 N2 178.03(17) . . C1 N1 C2 C5 1.0(3) . 12_666 C4 N2 C2 N1 153.20(17) . . C3 N2 C2 N1 -3.4(3) . . C4 N2 C2 C5 -29.9(3) . 12_666 C3 N2 C2 C5 173.45(18) . 12_666 C1 N3 C4 C5 2.9(3) 11_566 . C1 N3 C4 N2 178.67(17) 11_566 . C2 N2 C4 N3 123.5(2) . . C3 N2 C4 N3 -79.1(2) . . C2 N2 C4 C5 -60.6(3) . . C3 N2 C4 C5 96.8(2) . . N3 C4 C5 C2 -7.7(3) . 11_566 N2 C4 C5 C2 176.65(16) . 11_566 N3 C4 C5 Cl1 167.09(15) . . N2 C4 C5 Cl1 -8.5(3) . .