#------------------------------------------------------------------------------ #$Date: 2019-11-23 18:53:56 +0200 (Sat, 23 Nov 2019) $ #$Revision: 234529 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/03/63/4036310.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4036310 loop_ _publ_author_name 'Chaiyaveij, Duangduan' 'Batsanov, Andrei S.' 'Fox, Mark A.' 'Marder, Todd B.' 'Whiting, Andrew' _publ_section_title ; An Experimental and Computational Approach to Understanding the Reactions of Acyl Nitroso Compounds in [4 + 2] Cycloadditions. ; _journal_issue 19 _journal_name_full 'The Journal of organic chemistry' _journal_page_first 9518 _journal_page_last 9534 _journal_paper_doi 10.1021/acs.joc.5b01470 _journal_volume 80 _journal_year 2015 _chemical_formula_moiety 'C12 H14 N2 O2' _chemical_formula_sum 'C12 H14 N2 O2' _chemical_formula_weight 218.25 _chemical_melting_point 369 _chemical_name_systematic ; (4,5-Dimethyl-3,6-dihydro-2H-1,2-oxazin-2-yl)(pyridin-2-yl)methanone ; _space_group_crystal_system triclinic _space_group_IT_number 2 _space_group_name_Hall '-P 1' _space_group_name_H-M_alt 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_date 2013-03-04 _audit_creation_method ; Olex2 1.2-alpha (compiled Mar 1 2013 17:37:24, GUI svn.r4404) ; _cell_angle_alpha 77.293(3) _cell_angle_beta 68.194(3) _cell_angle_gamma 84.734(3) _cell_formula_units_Z 2 _cell_length_a 7.7458(6) _cell_length_b 8.3388(6) _cell_length_c 9.2703(7) _cell_measurement_reflns_used 1473 _cell_measurement_temperature 156 _cell_measurement_theta_max 24.32 _cell_measurement_theta_min 2.42 _cell_volume 542.28(7) _computing_cell_refinement 'SAINT v7.46A (Bruker, 2008)' _computing_data_collection 'SMART v5.625 (Bruker, 2001)' _computing_data_reduction 'SAINT v7.46A (Bruker, 2008)' _computing_molecular_graphics ; O. V. Dolomanov, L. J. Bourhis, R. J. Gildea, J. A. K. Howard and H. Puschmann, OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Cryst. (2009). 42, 339-341. ; _computing_publication_material ; O. V. Dolomanov, L. J. Bourhis, R. J. Gildea, J. A. K. Howard and H. Puschmann, OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Cryst. (2009). 42, 339-341. ; _computing_structure_refinement ; SHELXL-2012, G.M. Sheldrick, Acta Cryst. (2008). A64, 112-122 ; _computing_structure_solution ; XS, G.M. Sheldrick, Acta Cryst. (2008). A64, 112-122 ; _diffrn_ambient_temperature 156 _diffrn_detector 'CCD area detector' _diffrn_detector_area_resol_mean 5.6 _diffrn_detector_type 'Bruker SMART CCD 6000 area detector' _diffrn_measured_fraction_theta_full 0.964 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device 'three-circle diffractometer' _diffrn_measurement_device_type 'Bruker SMART CCD 6000 area detector' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_probe x-ray _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_xray_symbol K-L~3~ _diffrn_reflns_av_R_equivalents 0.0275 _diffrn_reflns_av_unetI/netI 0.0435 _diffrn_reflns_Laue_measured_fraction_full 0.964 _diffrn_reflns_Laue_measured_fraction_max 0.998 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 4329 _diffrn_reflns_point_group_measured_fraction_full 0.964 _diffrn_reflns_point_group_measured_fraction_max 0.998 _diffrn_reflns_theta_full 25.242 _diffrn_reflns_theta_max 24.998 _diffrn_reflns_theta_min 2.416 _diffrn_source 'sealed X-ray tube' _diffrn_source_current 35.0 _diffrn_source_power 1.75 _diffrn_source_target Mo _diffrn_source_voltage 50.0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.093 _exptl_absorpt_correction_type none _exptl_crystal_density_diffrn 1.337 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 232 _exptl_crystal_size_max 0.33 _exptl_crystal_size_mid 0.17 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.220 _refine_diff_density_min -0.179 _refine_diff_density_rms 0.038 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.950 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 149 _refine_ls_number_reflns 1896 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.950 _refine_ls_R_factor_all 0.0607 _refine_ls_R_factor_gt 0.0399 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details ; w=1/[\s^2^(Fo^2^)+(0.0553P)^2^] where P=(Fo^2^+2Fc^2^)/3 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0924 _refine_ls_wR_factor_ref 0.1010 _reflns_Friedel_coverage 0.000 _reflns_number_gt 1332 _reflns_number_total 1896 _reflns_threshold_expression 'I > 2\s(I)' _cod_data_source_file jo5b01470_si_002.cif _cod_data_source_block 32 _cod_database_code 4036310 _olex2_refinement_description ; 1. Fixed Uiso At 1.2 times of: All C(H) groups, All C(H,H) groups 2. Others Uiso(H14A)=Uiso(H14B)=Uiso(H14C) Uiso(H15A)=Uiso(H15B)=Uiso(H15C) 3.a Secondary CH2 refined with riding coordinates: C5(H5A,H5B), C7(H7A,H7B) 3.b Aromatic/amide H refined with riding coordinates: C10(H10), C12(H12), C13(H13), C16(H16) 3.c Idealised Me refined as rotating group: C14(H14A,H14B,H14C), C15(H15A,H15B,H15C) ; _shelx_space_group_comment ; The symmetry employed for this shelxl refinement is uniquely defined by the following loop, which should always be used as a source of symmetry information in preference to the above space-group names. They are only intended as comments. ; _shelxl_version_number 2012-9 loop_ _space_group_symop_operation_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_site_symmetry_order _atom_site_calc_flag _atom_site_refinement_flags_posn _atom_site_refinement_flags_adp O1 O 0.57216(16) 0.46355(13) 0.33533(14) 0.0327(3) Uani 1 1 d . . O2 O 0.33360(17) 0.83361(14) 0.38054(16) 0.0413(4) Uani 1 1 d . . N3 N 0.7881(2) 0.75414(17) 0.16861(18) 0.0355(4) Uani 1 1 d . . N4 N 0.43694(19) 0.58558(17) 0.32450(17) 0.0307(4) Uani 1 1 d . . C5 C 0.2580(2) 0.5174(2) 0.3578(2) 0.0324(4) Uani 1 1 d . . H5A H 0.1724 0.6064 0.3349 0.039 Uiso 1 1 calc R U H5B H 0.2038 0.4649 0.4714 0.039 Uiso 1 1 calc R U C6 C 0.4477(2) 0.3328(2) 0.1831(2) 0.0309(4) Uani 1 1 d . . C7 C 0.6171(2) 0.3850(2) 0.2029(2) 0.0329(4) Uani 1 1 d . . H7A H 0.6962 0.2871 0.2172 0.039 Uiso 1 1 calc R U H7B H 0.6899 0.4615 0.1051 0.039 Uiso 1 1 calc R U C8 C 0.6594(2) 0.78555(19) 0.3037(2) 0.0300(4) Uani 1 1 d . . C9 C 0.2801(2) 0.3918(2) 0.2569(2) 0.0318(4) Uani 1 1 d . . C10 C 0.6957(3) 0.8710(2) 0.4013(2) 0.0346(5) Uani 1 1 d . . H10 H 0.5998 0.8913 0.4954 0.041 Uiso 1 1 calc R U C11 C 0.4631(2) 0.7362(2) 0.3428(2) 0.0311(4) Uani 1 1 d . . C12 C 0.9590(3) 0.8109(2) 0.1303(2) 0.0395(5) Uani 1 1 d . . H12 H 1.0525 0.7910 0.0348 0.047 Uiso 1 1 calc R U C13 C 0.8738(3) 0.9263(2) 0.3596(2) 0.0402(5) Uani 1 1 d . . H13 H 0.9032 0.9838 0.4251 0.048 Uiso 1 1 calc R U C14 C 0.4903(3) 0.2104(2) 0.0766(2) 0.0405(5) Uani 1 1 d . . H14A H 0.6005 0.2455 -0.0180 0.063(4) Uiso 1 1 calc R U H14B H 0.3841 0.2040 0.0449 0.063(4) Uiso 1 1 calc R U H14C H 0.5140 0.1021 0.1336 0.063(4) Uiso 1 1 calc R U C15 C 0.0998(3) 0.3434(2) 0.2540(2) 0.0418(5) Uani 1 1 d . . H15A H 0.0208 0.2905 0.3611 0.062(4) Uiso 1 1 calc R U H15B H 0.1245 0.2664 0.1823 0.062(4) Uiso 1 1 calc R U H15C H 0.0362 0.4415 0.2166 0.062(4) Uiso 1 1 calc R U C16 C 1.0078(3) 0.8963(2) 0.2208(2) 0.0409(5) Uani 1 1 d . . H16 H 1.1314 0.9336 0.1881 0.049 Uiso 1 1 calc R U loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0337(7) 0.0343(7) 0.0346(7) -0.0111(5) -0.0163(6) 0.0044(6) O2 0.0372(8) 0.0382(7) 0.0534(9) -0.0182(6) -0.0183(7) 0.0056(6) N3 0.0337(9) 0.0390(9) 0.0362(10) -0.0097(7) -0.0139(7) -0.0012(7) N4 0.0294(8) 0.0311(8) 0.0351(9) -0.0102(6) -0.0141(7) 0.0017(6) C5 0.0280(10) 0.0349(10) 0.0349(11) -0.0077(8) -0.0113(8) -0.0020(8) C6 0.0362(10) 0.0296(9) 0.0278(10) -0.0041(7) -0.0127(8) -0.0037(8) C7 0.0335(10) 0.0339(10) 0.0331(11) -0.0112(8) -0.0120(8) 0.0020(8) C8 0.0347(10) 0.0261(9) 0.0313(11) -0.0047(7) -0.0150(9) 0.0011(8) C9 0.0350(10) 0.0315(10) 0.0292(10) -0.0034(7) -0.0126(8) -0.0049(8) C10 0.0419(11) 0.0316(10) 0.0333(11) -0.0059(8) -0.0171(9) -0.0016(8) C11 0.0331(10) 0.0343(10) 0.0291(11) -0.0081(8) -0.0139(8) 0.0000(8) C12 0.0334(11) 0.0400(11) 0.0428(12) -0.0089(9) -0.0106(9) -0.0006(9) C13 0.0505(12) 0.0326(10) 0.0491(13) -0.0079(9) -0.0310(11) -0.0021(9) C14 0.0456(12) 0.0419(11) 0.0384(12) -0.0137(9) -0.0170(10) -0.0004(9) C15 0.0385(11) 0.0432(11) 0.0462(13) -0.0122(9) -0.0146(10) -0.0079(9) C16 0.0360(11) 0.0348(10) 0.0545(14) -0.0038(9) -0.0218(10) -0.0034(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N4 O1 C7 107.56(11) C12 N3 C8 116.26(15) O1 N4 C5 112.57(12) C11 N4 O1 117.80(13) C11 N4 C5 124.88(14) N4 C5 C9 109.87(14) C9 C6 C7 120.85(16) C9 C6 C14 125.83(17) C14 C6 C7 113.32(15) O1 C7 C6 112.89(14) N3 C8 C10 123.49(16) N3 C8 C11 117.49(15) C10 C8 C11 118.84(16) C6 C9 C5 120.18(16) C6 C9 C15 126.10(17) C15 C9 C5 113.71(15) C13 C10 C8 118.88(18) O2 C11 N4 121.62(16) O2 C11 C8 120.84(15) N4 C11 C8 117.40(15) N3 C12 C16 124.16(19) C16 C13 C10 118.56(18) C13 C16 C12 118.65(18) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 N4 1.4072(16) O1 C7 1.432(2) O2 C11 1.226(2) N3 C8 1.342(2) N3 C12 1.339(2) N4 C5 1.445(2) N4 C11 1.347(2) C5 C9 1.510(2) C6 C7 1.505(2) C6 C9 1.329(2) C6 C14 1.504(2) C8 C10 1.384(2) C8 C11 1.500(2) C9 C15 1.500(2) C10 C13 1.381(2) C12 C16 1.379(3) C13 C16 1.377(3)