#------------------------------------------------------------------------------ #$Date: 2016-03-24 02:13:03 +0200 (Thu, 24 Mar 2016) $ #$Revision: 179562 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/50/31/4503139.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4503139 loop_ _publ_author_name 'Fang, Qianrong' 'Zhu, Guangshan' 'Xue, Ming' 'Wang, Zhuopeng' 'Sun, Jinyu' 'Qiu, Shilun' _publ_section_title ; Amine-Templated Assembly of Metal--Organic Frameworks with Attractive Topologies ; _journal_issue 1 _journal_name_full 'Crystal Growth & Design' _journal_page_first 319 _journal_paper_doi 10.1021/cg070604f _journal_volume 8 _journal_year 2008 _chemical_formula_moiety 'C26 H36 Cd N6 O16' _chemical_formula_sum 'C26 H36 Cd N6 O16' _chemical_formula_weight 801.01 _chemical_name_systematic ; ? ; _space_group_IT_number 43 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'F 2 -2d' _symmetry_space_group_name_H-M 'F d d 2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 15.8227(10) _cell_length_b 45.308(3) _cell_length_c 12.7105(8) _cell_measurement_temperature 293(2) _cell_volume 9112.1(10) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 6.00cm _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.989 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0439 _diffrn_reflns_av_sigmaI/netI 0.0433 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 53 _diffrn_reflns_limit_k_min -53 _diffrn_reflns_limit_l_max 6 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 11466 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 2.46 _diffrn_standards_decay_% none _diffrn_standards_interval_count none _diffrn_standards_interval_time none _diffrn_standards_number none _exptl_absorpt_coefficient_mu 0.539 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.168 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 3280 _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.25 _exptl_crystal_size_min 0.18 _refine_diff_density_max 1.576 _refine_diff_density_min -0.468 _refine_diff_density_rms 0.130 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.29(3) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.048 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 223 _refine_ls_number_reflns 2886 _refine_ls_number_restraints 61 _refine_ls_restrained_S_all 1.051 _refine_ls_R_factor_all 0.0627 _refine_ls_R_factor_gt 0.0573 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1199P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1539 _refine_ls_wR_factor_ref 0.1596 _reflns_number_gt 2586 _reflns_number_total 2886 _reflns_threshold_expression >2sigma(I) _cod_data_source_file cg070604f-file003.cif _cod_data_source_block 1123xm10a _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M Fdd2 _cod_database_code 4503139 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z' 'x+1/4, -y+1/4, z+1/4' '-x+1/4, y+1/4, z+1/4' 'x, y+1/2, z+1/2' '-x, -y+1/2, z+1/2' 'x+1/4, -y+3/4, z+3/4' '-x+1/4, y+3/4, z+3/4' 'x+1/2, y, z+1/2' '-x+1/2, -y, z+1/2' 'x+3/4, -y+1/4, z+3/4' '-x+3/4, y+1/4, z+3/4' 'x+1/2, y+1/2, z' '-x+1/2, -y+1/2, z' 'x+3/4, -y+3/4, z+1/4' '-x+3/4, y+3/4, z+1/4' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Cd1 Cd 0.0000 0.0000 0.42228(6) 0.02519(7) Uani 1 2 d S N1 N -0.15853(19) 0.17805(6) 0.0721(4) 0.0554(12) Uani 1 1 d . H1A H -0.1579 0.1970 0.0715 0.066 Uiso 1 1 calc R H1B H -0.2059 0.1687 0.0715 0.066 Uiso 1 1 calc R N2 N 0.0731(2) 0.16381(10) 0.0493(4) 0.0785(12) Uani 1 1 d U H2A H 0.0686 0.1462 0.0817 0.094 Uiso 1 1 calc R H2B H 0.1180 0.1731 0.0773 0.094 Uiso 1 1 calc R N3 N 0.1553(2) 0.17648(8) -0.2223(3) 0.0562(11) Uani 1 1 d . H3B H 0.1311 0.1618 -0.2527 0.067 Uiso 1 1 calc R H3C H 0.1856 0.1885 -0.2585 0.067 Uiso 1 1 calc R O1 O 0.06981(15) 0.03787(5) 0.5050(2) 0.0450(7) Uani 1 1 d U O2 O 0.12186(19) -0.00401(4) 0.5578(3) 0.0504(9) Uani 1 1 d . O3 O 0.43245(13) 0.03825(5) 0.8391(2) 0.0316(7) Uani 1 1 d . O4 O 0.3788(2) -0.00520(6) 0.7905(3) 0.0587(10) Uani 1 1 d . O5 O 0.26968(16) 0.13288(6) 0.7467(3) 0.0495(8) Uani 1 1 d . H5 H 0.2760 0.1209 0.7946 0.074 Uiso 1 1 calc R O6 O 0.2298(2) 0.13095(6) 0.5787(3) 0.0582(10) Uani 1 1 d . O7 O 0.2794(3) 0.10952(9) 0.9467(4) 0.1009(12) Uani 1 1 d U O8 O 0.1781(4) 0.13718(11) 0.1040(4) 0.144(2) Uani 1 1 d U C1 C 0.1245(2) 0.02242(8) 0.5540(3) 0.0374(10) Uani 1 1 d U C2 C 0.1921(2) 0.03802(6) 0.6127(3) 0.0281(9) Uani 1 1 d . C3 C 0.2512(2) 0.02416(6) 0.6633(4) 0.0314(7) Uani 1 1 d U H3A H 0.2536 0.0037 0.6616 0.038 Uiso 1 1 calc R C4 C 0.31480(19) 0.04105(8) 0.7237(3) 0.0349(10) Uani 1 1 d U C5 C 0.31461(18) 0.06964(7) 0.7226(3) 0.0288(9) Uani 1 1 d U H5A H 0.3586 0.0797 0.7555 0.035 Uiso 1 1 calc R C6 C 0.2519(2) 0.08572(6) 0.6746(7) 0.0389(8) Uani 1 1 d . C7 C 0.1925(2) 0.07093(8) 0.6111(3) 0.0374(9) Uani 1 1 d U H7A H 0.1546 0.0814 0.5693 0.045 Uiso 1 1 calc R C8 C 0.3802(2) 0.02348(7) 0.7873(3) 0.0313(9) Uani 1 1 d U C9 C 0.2531(3) 0.11888(7) 0.6597(4) 0.0371(10) Uani 1 1 d . C10 C -0.0777(3) 0.16131(9) 0.0740(4) 0.0575(14) Uani 1 1 d . H10A H -0.0750 0.1486 0.0127 0.069 Uiso 1 1 calc R H10B H -0.0764 0.1489 0.1360 0.069 Uiso 1 1 calc R C11 C -0.0027(2) 0.18107(12) 0.0747(5) 0.0682(18) Uani 1 1 d . H11A H -0.0101 0.1967 0.0233 0.082 Uiso 1 1 calc R H11B H 0.0035 0.1900 0.1435 0.082 Uiso 1 1 calc R C12 C 0.0914(3) 0.15826(10) -0.0630(4) 0.0660(15) Uani 1 1 d . H12A H 0.1192 0.1393 -0.0696 0.079 Uiso 1 1 calc R H12B H 0.0385 0.1572 -0.1013 0.079 Uiso 1 1 calc R C13 C 0.1450(4) 0.18091(12) -0.1113(5) 0.0789(18) Uani 1 1 d . H13A H 0.1200 0.2002 -0.0992 0.095 Uiso 1 1 calc R H13B H 0.2001 0.1807 -0.0778 0.095 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cd1 0.01915(11) 0.02226(11) 0.03416(15) 0.000 0.000 0.00297(17) N1 0.0447(17) 0.0218(13) 0.100(3) 0.0035(18) 0.0124(19) -0.0093(13) N2 0.075(2) 0.084(2) 0.076(2) -0.0002(18) 0.0181(18) -0.0085(17) N3 0.075(2) 0.0688(19) 0.0243(17) 0.0251(16) 0.0097(17) -0.0342(16) O1 0.0461(12) 0.0516(14) 0.0374(14) 0.0086(13) -0.0275(12) -0.0145(12) O2 0.0608(17) 0.0140(10) 0.076(2) 0.0014(13) -0.0228(17) -0.0057(10) O3 0.0191(10) 0.0291(11) 0.0466(16) 0.0035(12) -0.0055(11) -0.0047(9) O4 0.0575(17) 0.0549(15) 0.064(2) -0.0032(16) -0.0372(17) 0.0164(13) O5 0.0460(12) 0.0451(15) 0.0573(18) -0.0056(14) -0.0292(14) 0.0054(11) O6 0.0882(19) 0.0264(14) 0.060(2) 0.0040(15) -0.0286(18) -0.0087(13) O7 0.1050(19) 0.105(2) 0.093(2) 0.0077(19) 0.0035(19) 0.0287(18) O8 0.181(5) 0.170(4) 0.080(3) 0.035(3) 0.038(3) 0.044(4) C1 0.0261(16) 0.052(2) 0.034(2) 0.0021(18) -0.0148(16) -0.0008(15) C2 0.0390(17) 0.0237(15) 0.0218(17) 0.0027(14) 0.0011(16) -0.0046(13) C3 0.0343(12) 0.0328(12) 0.0271(15) 0.0019(18) -0.0074(11) 0.0114(15) C4 0.0222(15) 0.0394(18) 0.043(2) 0.0074(18) -0.0208(18) -0.0095(14) C5 0.0214(13) 0.0273(15) 0.0378(19) -0.0041(15) -0.0167(15) 0.0110(12) C6 0.0363(13) 0.0346(13) 0.0458(18) -0.005(4) -0.0175(13) -0.0275(16) C7 0.0357(16) 0.0418(16) 0.0348(18) 0.0028(15) -0.0083(15) 0.0102(13) C8 0.0333(15) 0.0299(15) 0.0306(17) 0.0004(14) -0.0040(14) 0.0084(13) C9 0.0341(14) 0.0410(15) 0.036(2) -0.010(2) -0.0137(14) 0.0073(19) C10 0.071(3) 0.046(2) 0.056(3) -0.009(2) 0.025(2) -0.014(2) C11 0.057(3) 0.074(3) 0.073(4) -0.010(3) 0.022(2) 0.005(2) C12 0.074(3) 0.061(3) 0.063(3) -0.013(3) 0.014(3) 0.002(2) C13 0.095(3) 0.089(3) 0.053(3) -0.001(3) 0.021(3) -0.004(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1 Cd1 O1 125.47(14) 2 . O1 Cd1 O3 123.48(8) 2 9_454 O1 Cd1 O3 82.58(8) . 9_454 O1 Cd1 O3 82.58(8) 2 10_554 O1 Cd1 O3 123.47(8) . 10_554 O3 Cd1 O3 125.09(13) 9_454 10_554 O1 Cd1 O4 82.55(10) 2 9_454 O1 Cd1 O4 136.87(9) . 9_454 O3 Cd1 O4 54.43(8) 9_454 9_454 O3 Cd1 O4 88.73(9) 10_554 9_454 O1 Cd1 O4 136.87(9) 2 10_554 O1 Cd1 O4 82.54(10) . 10_554 O3 Cd1 O4 88.73(9) 9_454 10_554 O3 Cd1 O4 54.43(8) 10_554 10_554 O4 Cd1 O4 98.17(17) 9_454 10_554 O1 Cd1 O2 52.41(8) 2 2 O1 Cd1 O2 90.06(9) . 2 O3 Cd1 O2 84.65(8) 9_454 2 O3 Cd1 O2 134.91(7) 10_554 2 O4 Cd1 O2 83.32(10) 9_454 2 O4 Cd1 O2 170.67(7) 10_554 2 O1 Cd1 O2 90.06(9) 2 . O1 Cd1 O2 52.41(8) . . O3 Cd1 O2 134.90(7) 9_454 . O3 Cd1 O2 84.65(9) 10_554 . O4 Cd1 O2 170.67(7) 9_454 . O4 Cd1 O2 83.32(10) 10_554 . O2 Cd1 O2 96.70(16) 2 . C10 N1 H1A 120.0 . . C10 N1 H1B 120.0 . . H1A N1 H1B 120.0 . . C11 N2 C12 117.6(5) . . C11 N2 H2A 107.9 . . C12 N2 H2A 107.9 . . C11 N2 H2B 107.9 . . C12 N2 H2B 107.9 . . H2A N2 H2B 107.2 . . C13 N3 H3B 120.0 . . C13 N3 H3C 120.0 . . H3B N3 H3C 120.0 . . C1 O1 Cd1 98.1(2) . . C1 O2 Cd1 85.9(2) . . C8 O3 Cd1 98.41(19) . 9 C8 O4 Cd1 85.2(2) . 9 C9 O5 H5 109.5 . . O2 C1 O1 122.9(3) . . O2 C1 C2 118.7(3) . . O1 C1 C2 118.3(3) . . C3 C2 C1 122.6(3) . . C3 C2 C7 119.2(3) . . C1 C2 C7 118.2(3) . . C2 C3 C4 119.8(3) . . C2 C3 H3A 120.1 . . C4 C3 H3A 120.1 . . C5 C4 C3 120.7(3) . . C5 C4 C8 121.7(3) . . C3 C4 C8 117.6(3) . . C4 C5 C6 122.5(3) . . C4 C5 H5A 118.8 . . C6 C5 H5A 118.8 . . C5 C6 C7 119.0(3) . . C5 C6 C9 124.9(4) . . C7 C6 C9 114.1(5) . . C6 C7 C2 118.1(3) . . C6 C7 H7A 121.0 . . C2 C7 H7A 121.0 . . O3 C8 O4 122.0(3) . . O3 C8 C4 116.4(3) . . O4 C8 C4 121.5(3) . . O6 C9 O5 123.9(3) . . O6 C9 C6 123.0(5) . . O5 C9 C6 112.3(5) . . N1 C10 C11 112.3(3) . . N1 C10 H10A 109.1 . . C11 C10 H10A 109.1 . . N1 C10 H10B 109.1 . . C11 C10 H10B 109.1 . . H10A C10 H10B 107.9 . . N2 C11 C10 109.3(4) . . N2 C11 H11A 109.8 . . C10 C11 H11A 109.8 . . N2 C11 H11B 109.8 . . C10 C11 H11B 109.8 . . H11A C11 H11B 108.3 . . C13 C12 N2 113.5(4) . . C13 C12 H12A 108.9 . . N2 C12 H12A 108.9 . . C13 C12 H12B 108.9 . . N2 C12 H12B 108.9 . . H12A C12 H12B 107.7 . . N3 C13 C12 112.3(4) . . N3 C13 H13A 109.1 . . C12 C13 H13A 109.1 . . N3 C13 H13B 109.1 . . C12 C13 H13B 109.1 . . H13A C13 H13B 107.9 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Cd1 O1 2.295(2) 2 Cd1 O1 2.296(2) . Cd1 O3 2.295(2) 9_454 Cd1 O3 2.295(2) 10_554 Cd1 O4 2.557(3) 9_454 Cd1 O4 2.557(3) 10_554 Cd1 O2 2.592(3) 2 Cd1 O2 2.592(3) . N1 C10 1.487(5) . N1 H1A 0.8600 . N1 H1B 0.8600 . N2 C11 1.467(6) . N2 C12 1.478(7) . N2 H2A 0.9000 . N2 H2B 0.9000 . N3 C13 1.434(7) . N3 H3B 0.8600 . N3 H3C 0.8600 . O1 C1 1.275(4) . O2 C1 1.199(4) . O3 C8 1.250(4) . O3 Cd1 2.295(2) 9 O4 C8 1.300(4) . O4 Cd1 2.557(3) 9 O5 C9 1.301(6) . O5 H5 0.8200 . O6 C9 1.223(6) . C1 C2 1.483(5) . C2 C3 1.297(5) . C2 C7 1.491(5) . C3 C4 1.479(5) . C3 H3A 0.9300 . C4 C5 1.296(4) . C4 C8 1.535(5) . C5 C6 1.373(6) . C5 H5A 0.9300 . C6 C7 1.409(7) . C6 C9 1.514(4) . C7 H7A 0.9300 . C10 C11 1.487(6) . C10 H10A 0.9700 . C10 H10B 0.9700 . C11 H11A 0.9700 . C11 H11B 0.9700 . C12 C13 1.466(7) . C12 H12A 0.9700 . C12 H12B 0.9700 . C13 H13A 0.9700 . C13 H13B 0.9700 . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N1 H1A O4 0.86 2.25 3.087(4) 165.2 4_554 N1 H1B O6 0.86 1.99 2.772(4) 149.9 9_454 N3 H3B O7 0.86 1.98 2.773(6) 152.0 11_453 N3 H3C O3 0.86 2.21 2.913(4) 139.5 11_453 N3 H3C O1 0.86 2.38 3.077(4) 138.0 3_554 O5 H5 O7 0.82 2.00 2.758(6) 152.9 .