#------------------------------------------------------------------------------ #$Date: 2012-02-26 23:34:47 +0200 (Sun, 26 Feb 2012) $ #$Revision: 35909 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/05/20/7052012.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7052012 loop_ _publ_author_name 'Barnett, Sarah A.' 'Hulme, Ashley T.' 'Issa, Nizar' 'Lewis, Thomas C.' 'Price, Louise S.' 'Tocher, Derek A.' 'Price, Sarah L.' _publ_section_title ; The observed and energetically feasible crystal structures of 5-substituted uracils ; _journal_issue 10 _journal_name_full 'New Journal of Chemistry' _journal_page_first 1761 _journal_volume 32 _journal_year 2008 _chemical_formula_moiety 'C5 H6 F N3 O3 ' _chemical_formula_sum 'C5 H6 F N3 O3' _chemical_formula_weight 175.13 _chemical_name_common 'C4 H3 F N2 O2 , C H3 N O' _chemical_name_systematic ; 5-Fluorouracil Formaide solvate (1/1) ; _space_group_IT_number 11 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yb' _symmetry_space_group_name_H-M 'P 1 21/m 1' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.313(8) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 6.827(4) _cell_length_b 6.111(3) _cell_length_c 8.424(4) _cell_measurement_reflns_used 1298 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 27.6775 _cell_measurement_theta_min 2.418 _cell_volume 351.4(3) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL and local programs' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 0.979 _diffrn_measured_fraction_theta_max 0.909 _diffrn_measurement_device_type 'Bruker SMART APEX diffractometer' _diffrn_measurement_method '\w rotation with narrow frames' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0243 _diffrn_reflns_av_sigmaI/netI 0.0242 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 2892 _diffrn_reflns_theta_full 26.00 _diffrn_reflns_theta_max 28.28 _diffrn_reflns_theta_min 2.42 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.153 _exptl_absorpt_correction_T_max 0.9774 _exptl_absorpt_correction_T_min 0.9512 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS, (Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.655 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 180 _exptl_crystal_size_max 0.33 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.433 _refine_diff_density_min -0.283 _refine_diff_density_rms 0.053 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.096 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 92 _refine_ls_number_reflns 866 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.096 _refine_ls_R_factor_all 0.0476 _refine_ls_R_factor_gt 0.0407 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0597P)^2^+0.1250P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1061 _refine_ls_wR_factor_ref 0.1108 _reflns_number_gt 765 _reflns_number_total 866 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file b806763e.txt _[local]_cod_data_source_block STR0469 _[local]_cod_cif_authors_sg_H-M P21/m _[local]_cod_chemical_formula_sum_orig 'C5 H6 F N3 O3 ' _cod_database_code 7052012 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' '-x, -y, -z' 'x, -y-1/2, z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group F9 F 0.5170(3) 0.7500 1.0024(2) 0.0290(4) Uani 1 2 d S . . O7 O 0.4985(4) 0.7500 0.3673(2) 0.0227(5) Uani 1 2 d S . . O8 O 0.1658(3) 0.7500 0.8306(3) 0.0288(6) Uani 1 2 d S . . N1 N 0.6732(4) 0.7500 0.5987(4) 0.0200(6) Uani 1 2 d S . . H1 H 0.795(7) 0.7500 0.534(6) 0.033(11) Uiso 1 2 d S . . N3 N 0.3351(5) 0.7500 0.6013(4) 0.0207(7) Uani 1 2 d S . . H3 H 0.232(7) 0.7500 0.550(5) 0.022(10) Uiso 1 2 d S . . C2 C 0.5035(6) 0.7500 0.5130(3) 0.0190(5) Uani 1 2 d S . . C4 C 0.3251(5) 0.7500 0.7636(4) 0.0187(7) Uani 1 2 d S . . C5 C 0.5138(5) 0.7500 0.8421(3) 0.0200(6) Uani 1 2 d S . . C6 C 0.6806(5) 0.7500 0.7613(4) 0.0211(7) Uani 1 2 d S . . H6 H 0.801(6) 0.7500 0.813(4) 0.014(9) Uiso 1 2 d S . . O10 O -0.0052(5) 0.7500 0.4125(2) 0.0325(5) Uani 1 2 d S . . C11 C -0.0150(5) 0.7500 0.2654(3) 0.0224(6) Uani 1 2 d S . . H11 H -0.139(6) 0.7500 0.206(5) 0.020(9) Uiso 1 2 d S . . N12 N 0.1408(5) 0.7500 0.1755(4) 0.0255(6) Uani 1 2 d S . . H12A H 0.126(6) 0.7500 0.083(5) 0.028(11) Uiso 1 2 d S . . H12B H 0.260(7) 0.7500 0.215(5) 0.047(13) Uiso 1 2 d S . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 F9 0.0293(10) 0.0424(8) 0.0153(7) 0.000 0.0013(9) 0.000 O7 0.0227(11) 0.0293(9) 0.0163(9) 0.000 0.0057(11) 0.000 O8 0.0207(11) 0.0428(13) 0.0230(12) 0.000 0.0039(10) 0.000 N1 0.0158(13) 0.0235(13) 0.0207(16) 0.000 0.0047(11) 0.000 N3 0.0186(16) 0.0246(13) 0.0189(14) 0.000 0.0013(11) 0.000 C2 0.0204(13) 0.0152(10) 0.0216(12) 0.000 0.0065(17) 0.000 C4 0.0222(17) 0.0185(13) 0.0156(15) 0.000 0.0046(12) 0.000 C5 0.0220(15) 0.0237(11) 0.0144(11) 0.000 -0.0003(16) 0.000 C6 0.0199(16) 0.0219(14) 0.0213(17) 0.000 -0.0024(13) 0.000 O10 0.0201(11) 0.0584(14) 0.0192(10) 0.000 0.0048(11) 0.000 C11 0.0211(15) 0.0261(12) 0.0200(13) 0.000 0.0024(15) 0.000 N12 0.0274(13) 0.0331(13) 0.0161(14) 0.000 0.0007(13) 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C2 N1 C6 123.8(3) . . ? C2 N1 H1 115(3) . . ? C6 N1 H1 121(3) . . ? C4 N3 C2 126.0(4) . . ? C4 N3 H3 118(3) . . ? C2 N3 H3 116(3) . . ? O7 C2 N1 123.3(3) . . ? O7 C2 N3 121.5(4) . . ? N1 C2 N3 115.2(2) . . ? O8 C4 N3 120.5(4) . . ? O8 C4 C5 125.4(3) . . ? N3 C4 C5 114.0(3) . . ? C6 C5 F9 120.2(3) . . ? C6 C5 C4 122.0(3) . . ? F9 C5 C4 117.8(3) . . ? C5 C6 N1 119.0(4) . . ? C5 C6 H6 121(2) . . ? N1 C6 H6 120(2) . . ? O10 C11 N12 122.6(4) . . ? O10 C11 H11 124(2) . . ? N12 C11 H11 114(2) . . ? C11 N12 H12A 118(3) . . ? C11 N12 H12B 122(3) . . ? H12A N12 H12B 119(5) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag F9 C5 1.351(3) . ? O7 C2 1.228(3) . ? O8 C4 1.228(5) . ? N1 C2 1.361(5) . ? N1 C6 1.371(4) . ? N1 H1 1.00(5) . ? N3 C4 1.370(4) . ? N3 C2 1.373(5) . ? N3 H3 0.82(5) . ? C4 C5 1.445(6) . ? C5 C6 1.330(5) . ? C6 H6 0.93(4) . ? O10 C11 1.241(3) . ? C11 N12 1.309(5) . ? C11 H11 0.98(4) . ? N12 H12A 0.79(4) . ? N12 H12B 0.88(5) . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N3 H3 O10 0.82(5) 1.99(5) 2.808(5) 176(4) . N1 H1 O10 1.00(5) 1.71(5) 2.705(4) 176(4) 1_655 N12 H12B O7 0.88(5) 2.06(5) 2.921(4) 164(4) . N12 H12A O8 0.79(4) 2.14(4) 2.911(4) 166(4) 1_554 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C6 N1 C2 O7 180.0 . . . . ? C6 N1 C2 N3 0.0 . . . . ? C4 N3 C2 O7 180.0 . . . . ? C4 N3 C2 N1 0.000(1) . . . . ? C2 N3 C4 O8 180.0 . . . . ? C2 N3 C4 C5 0.000(1) . . . . ? O8 C4 C5 C6 180.000(1) . . . . ? N3 C4 C5 C6 0.000(1) . . . . ? O8 C4 C5 F9 0.000(1) . . . . ? N3 C4 C5 F9 180.0 . . . . ? F9 C5 C6 N1 180.000(1) . . . . ? C4 C5 C6 N1 0.000(1) . . . . ? C2 N1 C6 C5 0.000(1) . . . . ?