#------------------------------------------------------------------------------ #$Date: 2014-03-15 16:00:52 +0200 (Sat, 15 Mar 2014) $ #$Revision: 106664 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/10/94/7109423.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7109423 loop_ _publ_author_name 'Eric Daniel Glowacki' 'Gundula Voss' 'Kadir Demirak' 'Marek Havlicek' 'Nevsal Sunger' 'Aysu Ceren Okur' 'Uwe Monkowius' 'Jacek Gasiorowski' 'Lucia Leonat' 'Niyazi Serdar Sariciftci' _publ_section_title ; A facile protection-deprotection route for obtaining indigo pigments as thin films and their applications in organic bulk heterojunctions ; _journal_name_full Chem.Commun. _journal_page_first 6063 _journal_volume 49 _journal_year 2013 _chemical_formula_moiety 'C26 H26 N2 O6' _chemical_formula_sum 'C26 H26 N2 O6' _chemical_formula_weight 462.49 _space_group_crystal_system monoclinic _space_group_IT_number 15 _space_group_name_Hall '-C 2yc' _space_group_name_H-M_alt 'C 1 2/c 1' _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method 'APEX2 v2010.1-2' _cell_angle_alpha 90 _cell_angle_beta 113.657(12) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 21.069(9) _cell_length_b 7.368(3) _cell_length_c 17.190(7) _cell_measurement_temperature 300.(2) _cell_volume 2444.3(18) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 300.(2) _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.989 _diffrn_measurement_device_type 'SMART X2S' _diffrn_measurement_method omega-scan _diffrn_radiation_monochromator 'doubly curved silicon crystal' _diffrn_radiation_source 'sealed MicroFocus tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0508 _diffrn_reflns_av_sigmaI/netI 0.0404 _diffrn_reflns_limit_h_max 23 _diffrn_reflns_limit_h_min -24 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 10227 _diffrn_reflns_theta_full 25.11 _diffrn_reflns_theta_max 25.11 _diffrn_reflns_theta_min 2.60 _exptl_absorpt_coefficient_mu 0.090 _exptl_absorpt_correction_T_max 0.96 _exptl_absorpt_correction_T_min 0.94 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; ; _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.257 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Parallelepiped _exptl_crystal_F_000 976 _exptl_crystal_size_max 0.70 _exptl_crystal_size_mid 0.60 _exptl_crystal_size_min 0.40 _refine_diff_density_max 0.175 _refine_diff_density_min -0.133 _refine_ls_extinction_coef 0.0017(5) _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.034 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 158 _refine_ls_number_reflns 2162 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.034 _refine_ls_R_factor_all 0.0595 _refine_ls_R_factor_gt 0.0417 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0470P)^2^+0.8866P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1031 _refine_ls_wR_factor_ref 0.1136 _reflns_number_gt 1647 _reflns_number_total 2162 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c3cc42889c.txt _[local]_cod_data_source_block I _cod_original_cell_volume 2444.3(19) _cod_database_code 7109423 loop_ _space_group_symop_operation_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy O O1 0.07979(6) 0.93342(15) 0.21888(7) 0.0503(3) Uani d . 1 O O2 0.18484(7) 0.8000(2) 0.26878(11) 0.0902(6) Uani d . 1 O O3 -0.02689(6) 0.62147(17) 0.38619(8) 0.0604(4) Uani d . 1 N N1 0.09692(6) 0.68595(19) 0.29920(8) 0.0457(4) Uani d . 1 C C1 0.02401(12) 1.1638(3) 0.12524(16) 0.0888(8) Uani d . 1 H H11 -0.0086 1.0728 0.0932 0.133 Uiso calc R 1 H H1 0.026 1.258 0.0877 0.133 Uiso calc R 1 H H2 0.0097 1.2145 0.167 0.133 Uiso calc R 1 C C2 0.09448(9) 1.0792(3) 0.16876(12) 0.0583(5) Uani d . 1 C C3 0.12603(8) 0.8096(2) 0.26002(11) 0.0530(5) Uani d . 1 C C4 0.02713(8) 0.6855(2) 0.28813(10) 0.0422(4) Uani d . 1 C C5 0.14595(13) 1.2085(3) 0.22923(17) 0.1062(10) Uani d . 1 H H9 0.1305 1.2442 0.2724 0.159 Uiso calc R 1 H H10 0.15 1.314 0.1988 0.159 Uiso calc R 1 H H3 0.1902 1.15 0.2551 0.159 Uiso calc R 1 C C6 0.13742(8) 0.6102(2) 0.38081(11) 0.0470(4) Uani d . 1 C C7 0.20742(9) 0.5725(3) 0.41631(13) 0.0614(5) Uani d . 1 H H4 0.2357 0.5969 0.3877 0.074 Uiso calc R 1 C C8 0.23360(11) 0.4960(3) 0.49716(14) 0.0731(6) Uani d . 1 H H12 0.2805 0.4679 0.5228 0.088 Uiso calc R 1 C C9 0.19231(11) 0.4603(3) 0.54068(13) 0.0736(6) Uani d . 1 H H5 0.2119 0.4094 0.5947 0.088 Uiso calc R 1 C C10 0.12287(11) 0.4989(3) 0.50518(12) 0.0621(5) Uani d . 1 H H13 0.0948 0.4754 0.5342 0.075 Uiso calc R 1 C C11 0.09558(9) 0.5750(2) 0.42385(10) 0.0483(4) Uani d . 1 C C12 0.02472(9) 0.6299(2) 0.37084(11) 0.0456(4) Uani d . 1 C C13 0.11858(13) 0.9989(3) 0.10455(16) 0.0876(7) Uani d . 1 H H8 0.1636 0.9456 0.1335 0.131 Uiso calc R 1 H H6 0.1211 1.0926 0.0671 0.131 Uiso calc R 1 H H7 0.0864 0.9072 0.0722 0.131 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0508(7) 0.0469(7) 0.0566(7) 0.0007(5) 0.0252(6) 0.0099(5) O2 0.0498(8) 0.1121(13) 0.1169(13) 0.0147(8) 0.0421(8) 0.0558(11) O3 0.0665(8) 0.0642(8) 0.0648(8) 0.0068(6) 0.0412(7) 0.0115(7) N1 0.0430(7) 0.0504(8) 0.0462(7) 0.0030(6) 0.0203(6) 0.0075(6) C1 0.0900(16) 0.0750(15) 0.0976(17) 0.0138(12) 0.0337(14) 0.0351(14) C2 0.0653(11) 0.0507(10) 0.0578(11) -0.0091(8) 0.0234(9) 0.0122(9) C3 0.0440(10) 0.0597(11) 0.0578(10) 0.0019(8) 0.0231(8) 0.0114(9) C4 0.0458(8) 0.0380(8) 0.0465(8) 0.0013(6) 0.0225(7) 0.0014(7) C5 0.123(2) 0.0788(17) 0.0923(18) -0.0470(15) 0.0178(16) 0.0061(14) C6 0.0498(9) 0.0404(9) 0.0483(9) 0.0019(7) 0.0171(8) 0.0001(7) C7 0.0511(10) 0.0597(12) 0.0686(12) 0.0041(8) 0.0190(9) 0.0074(10) C8 0.0595(12) 0.0674(13) 0.0731(13) 0.0079(10) 0.0064(11) 0.0103(11) C9 0.0821(15) 0.0684(13) 0.0533(11) 0.0033(11) 0.0095(11) 0.0120(10) C10 0.0802(14) 0.0559(11) 0.0476(10) 0.0019(10) 0.0228(10) 0.0053(9) C11 0.0602(10) 0.0413(9) 0.0455(9) 0.0012(7) 0.0234(8) 0.0007(7) C12 0.0545(10) 0.0393(9) 0.0491(9) -0.0007(7) 0.0271(8) -0.0011(7) C13 0.1131(19) 0.0866(17) 0.0829(15) -0.0027(14) 0.0599(15) 0.0188(13) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle C3 O1 C2 . 122.14(13) C4 N1 C3 . 124.66(13) C4 N1 C6 . 108.17(13) C3 N1 C6 . 121.15(13) C2 C1 H11 . 109.5 C2 C1 H1 . 109.5 H11 C1 H1 . 109.5 C2 C1 H2 . 109.5 H11 C1 H2 . 109.5 H1 C1 H2 . 109.5 O1 C2 C5 . 108.52(16) O1 C2 C1 . 101.21(15) C5 C2 C1 . 112.1(2) O1 C2 C13 . 110.50(16) C5 C2 C13 . 113.2(2) C1 C2 C13 . 110.71(18) O2 C3 O1 . 128.25(17) O2 C3 N1 . 122.13(16) O1 C3 N1 . 109.54(14) C4 C4 N1 2 124.32(19) C4 C4 C12 2 125.67(18) N1 C4 C12 . 107.69(13) C2 C5 H9 . 109.5 C2 C5 H10 . 109.5 H9 C5 H10 . 109.5 C2 C5 H3 . 109.5 H9 C5 H3 . 109.5 H10 C5 H3 . 109.5 C7 C6 C11 . 121.53(17) C7 C6 N1 . 128.58(17) C11 C6 N1 . 109.89(14) C6 C7 C8 . 116.6(2) C6 C7 H4 . 121.7 C8 C7 H4 . 121.7 C9 C8 C7 . 122.30(19) C9 C8 H12 . 118.9 C7 C8 H12 . 118.9 C10 C9 C8 . 120.74(19) C10 C9 H5 . 119.6 C8 C9 H5 . 119.6 C9 C10 C11 . 117.8(2) C9 C10 H13 . 121.1 C11 C10 H13 . 121.1 C6 C11 C10 . 121.02(17) C6 C11 C12 . 109.00(15) C10 C11 C12 . 129.97(18) O3 C12 C11 . 128.93(16) O3 C12 C4 . 126.26(15) C11 C12 C4 . 104.61(14) C2 C13 H8 . 109.5 C2 C13 H6 . 109.5 H8 C13 H6 . 109.5 C2 C13 H7 . 109.5 H8 C13 H7 . 109.5 H6 C13 H7 . 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance O1 C3 . 1.315(2) O1 C2 . 1.485(2) O2 C3 . 1.189(2) O3 C12 . 1.219(2) N1 C4 . 1.405(2) N1 C3 . 1.411(2) N1 C6 . 1.431(2) C1 C2 . 1.504(3) C1 H11 . 0.96 C1 H1 . 0.96 C1 H2 . 0.96 C2 C5 . 1.503(3) C2 C13 . 1.509(3) C4 C4 2 1.350(3) C4 C12 . 1.500(2) C5 H9 . 0.96 C5 H10 . 0.96 C5 H3 . 0.96 C6 C7 . 1.379(2) C6 C11 . 1.384(2) C7 C8 . 1.392(3) C7 H4 . 0.93 C8 C9 . 1.381(3) C8 H12 . 0.93 C9 C10 . 1.370(3) C9 H5 . 0.93 C10 C11 . 1.398(2) C10 H13 . 0.93 C11 C12 . 1.460(2) C13 H8 . 0.96 C13 H6 . 0.96 C13 H7 . 0.96 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion C3 O1 C2 C5 . . -70.0(2) C3 O1 C2 C1 . . 171.92(17) C3 O1 C2 C13 . . 54.6(2) C2 O1 C3 O2 . . 5.4(3) C2 O1 C3 N1 . . -177.97(14) C4 N1 C3 O2 . . -176.98(18) C6 N1 C3 O2 . . 33.6(3) C4 N1 C3 O1 . . 6.1(2) C6 N1 C3 O1 . . -143.30(15) C3 N1 C4 C4 . 2 51.46(19) C6 N1 C4 C4 . 2 -155.81(9) C3 N1 C4 C12 . . -145.05(16) C6 N1 C4 C12 . . 7.68(17) C4 N1 C6 C7 . . 175.15(17) C3 N1 C6 C7 . . -31.0(3) C4 N1 C6 C11 . . -4.52(19) C3 N1 C6 C11 . . 149.35(16) C11 C6 C7 C8 . . 0.5(3) N1 C6 C7 C8 . . -179.13(17) C6 C7 C8 C9 . . -0.5(3) C7 C8 C9 C10 . . 0.2(3) C8 C9 C10 C11 . . 0.1(3) C7 C6 C11 C10 . . -0.2(3) N1 C6 C11 C10 . . 179.48(15) C7 C6 C11 C12 . . 179.63(16) N1 C6 C11 C12 . . -0.68(19) C9 C10 C11 C6 . . -0.1(3) C9 C10 C11 C12 . . -179.90(18) C6 C11 C12 O3 . . -179.75(16) C10 C11 C12 O3 . . 0.1(3) C6 C11 C12 C4 . . 5.19(18) C10 C11 C12 C4 . . -174.99(17) C4 C4 C12 O3 2 . -19.9(2) N1 C4 C12 O3 . . 176.88(15) C4 C4 C12 C11 2 . 155.32(11) N1 C4 C12 C11 . . -7.89(17) _journal_paper_doi 10.1039/c3cc42889c