#------------------------------------------------------------------------------ #$Date: 2016-03-26 03:55:00 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180202 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/10/96/7109698.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7109698 loop_ _publ_author_name 'Maria-Jose Oliva-Madrid' 'Isabel Saura-Llamas' 'Delia Bautista' 'Jose Vicente' _publ_section_title ; Benzyne-benzyne-RNC or CO triple sequential insertion into the Pd-C bond: synthesis of ten-membered N-heterocycles through stable ten- and eleven-membered palladacycles ; _journal_name_full Chem.Commun. _journal_page_first 7997 _journal_paper_doi 10.1039/c3cc43049a _journal_volume 49 _journal_year 2013 _chemical_formula_sum 'C28 H29 Br N2 O2 Pd' _chemical_formula_weight 611.84 _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary iterative _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 102.373(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 29.001(2) _cell_length_b 9.2274(7) _cell_length_c 19.9745(16) _cell_measurement_reflns_used 3426 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 74.6252 _cell_measurement_theta_min 3.1175 _cell_volume 5221.1(7) _computing_cell_refinement ; CrysAlisPro, Agilent Technologies, Version 1.171.36.18t (release 05-06-2012 CrysAlis171 .NET) (compiled Jun 5 2012,17:40:27) ; _computing_data_collection ; CrysAlisPro, Agilent Technologies, Version 1.171.36.18t (release 05-06-2012 CrysAlis171 .NET) (compiled Jun 5 2012,17:40:27) ; _computing_data_reduction ; CrysAlisPro, Agilent Technologies, Version 1.171.36.18t (release 05-06-2012 CrysAlis171 .NET) (compiled Jun 5 2012,17:40:27) ; _computing_molecular_graphics Shelxtl _computing_publication_material Shelxtl _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution ; olex2.solve (L.J. Bourhis, O.V. Dolomanov, R.J. Gildea, J.A.K. Howard, H. Puschmann, in preparation, 2011) ; _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.960 _diffrn_measurement_device_type 'SuperNova, Dual, Cu at zero, Atlas' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator mirror _diffrn_radiation_source 'SuperNova (Cu) X-ray Source' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.0419 _diffrn_reflns_av_sigmaI/netI 0.0505 _diffrn_reflns_limit_h_max 33 _diffrn_reflns_limit_h_min -35 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 24 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 9964 _diffrn_reflns_theta_full 70.00 _diffrn_reflns_theta_max 74.80 _diffrn_reflns_theta_min 3.12 _exptl_absorpt_coefficient_mu 7.736 _exptl_absorpt_correction_T_max 0.837 _exptl_absorpt_correction_T_min 0.524 _exptl_absorpt_correction_type analytical _exptl_absorpt_process_details ; CrysAlisPro, Agilent Technologies, Version 1.171.36.18t (release 05-06-2012 CrysAlis171 .NET) (compiled Jun 5 2012,17:40:27) Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by R.C. Clark & J.S. Reid. (Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897) ; _exptl_crystal_density_diffrn 1.557 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 2464 _exptl_crystal_size_max 0.14 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.03 _refine_diff_density_max 1.616 _refine_diff_density_min -1.495 _refine_diff_density_rms 0.151 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.040 _refine_ls_hydrogen_treatment 'NH2 free with SADI, rigid methyls, others riding' _refine_ls_matrix_type full _refine_ls_number_parameters 318 _refine_ls_number_reflns 5145 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.040 _refine_ls_R_factor_all 0.0553 _refine_ls_R_factor_gt 0.0479 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0862P)^2^+9.0565P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1280 _refine_ls_wR_factor_ref 0.1370 _reflns_number_gt 4453 _reflns_number_total 5145 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3cc43049a.txt _cod_data_source_block joe124_1 _cod_database_code 7109698 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Pd1 Pd 0.450307(10) 0.44385(3) 0.663698(15) 0.01998(13) Uani 1 1 d . N1 N 0.41342(14) 0.2825(4) 0.7013(2) 0.0277(8) Uani 1 1 d D H01A H 0.4313(18) 0.261(6) 0.739(2) 0.023(13) Uiso 1 1 d D H01B H 0.3889(15) 0.324(5) 0.706(3) 0.016(12) Uiso 1 1 d D N2 N 0.48562(13) 0.6140(4) 0.62927(19) 0.0206(7) Uani 1 1 d . Br1 Br 0.511746(17) 0.25819(5) 0.64510(3) 0.02888(15) Uani 1 1 d . C1 C 0.40181(16) 0.5850(5) 0.6809(2) 0.0235(8) Uani 1 1 d . C2 C 0.40228(15) 0.6245(5) 0.7483(2) 0.0232(8) Uani 1 1 d . H2 H 0.4236 0.5782 0.7848 0.028 Uiso 1 1 calc R C3 C 0.37212(16) 0.7304(5) 0.7626(2) 0.0263(9) Uani 1 1 d . H3 H 0.3730 0.7574 0.8088 0.032 Uiso 1 1 calc R C4 C 0.34078(17) 0.7970(5) 0.7098(3) 0.0289(9) Uani 1 1 d . H4 H 0.3202 0.8705 0.7194 0.035 Uiso 1 1 calc R C5 C 0.33960(16) 0.7558(5) 0.6426(3) 0.0268(9) Uani 1 1 d . H5 H 0.3181 0.8021 0.6063 0.032 Uiso 1 1 calc R C6 C 0.36936(15) 0.6478(4) 0.6273(2) 0.0208(8) Uani 1 1 d . C7 C 0.36659(14) 0.6006(5) 0.5551(2) 0.0223(8) Uani 1 1 d . C8 C 0.39032(15) 0.6768(5) 0.5127(2) 0.0257(9) Uani 1 1 d . H8 H 0.4072 0.7622 0.5296 0.031 Uiso 1 1 calc R C9 C 0.39005(16) 0.6314(5) 0.4466(2) 0.0281(9) Uani 1 1 d . H9 H 0.4067 0.6844 0.4185 0.034 Uiso 1 1 calc R C10 C 0.36511(17) 0.5071(6) 0.4220(2) 0.0305(10) Uani 1 1 d . H10 H 0.3646 0.4750 0.3766 0.037 Uiso 1 1 calc R C11 C 0.34094(19) 0.4296(6) 0.4630(3) 0.0336(11) Uani 1 1 d . H11 H 0.3241 0.3445 0.4456 0.040 Uiso 1 1 calc R C12 C 0.34104(15) 0.4749(5) 0.5295(2) 0.0229(8) Uani 1 1 d . C13 C 0.31240(16) 0.3952(5) 0.5713(2) 0.0241(8) Uani 1 1 d . C14 C 0.27040(16) 0.4614(5) 0.5809(2) 0.0249(9) Uani 1 1 d . H14 H 0.2618 0.5537 0.5610 0.030 Uiso 1 1 calc R C15 C 0.24157(15) 0.3949(5) 0.6185(2) 0.0255(9) Uani 1 1 d . C16 C 0.25415(16) 0.2575(5) 0.6474(2) 0.0231(9) Uani 1 1 d . C17 C 0.29455(15) 0.1917(5) 0.6367(2) 0.0255(9) Uani 1 1 d . H17 H 0.3025 0.0980 0.6554 0.031 Uiso 1 1 calc R C18 C 0.32439(16) 0.2584(5) 0.5990(2) 0.0247(9) Uani 1 1 d . C19 C 0.1884(2) 0.5934(6) 0.6054(4) 0.0429(13) Uani 1 1 d . H19A H 0.2142 0.6604 0.6240 0.064 Uiso 1 1 calc R H19B H 0.1596 0.6248 0.6194 0.064 Uiso 1 1 calc R H19C H 0.1830 0.5927 0.5553 0.064 Uiso 1 1 calc R O1 O 0.20056(12) 0.4524(4) 0.6308(2) 0.0299(7) Uani 1 1 d . C20 C 0.23489(18) 0.0630(6) 0.7139(3) 0.0337(11) Uani 1 1 d . H20A H 0.2342 -0.0092 0.6777 0.051 Uiso 1 1 calc R H20B H 0.2117 0.0368 0.7411 0.051 Uiso 1 1 calc R H20C H 0.2665 0.0656 0.7437 0.051 Uiso 1 1 calc R O2 O 0.22372(11) 0.2010(4) 0.68401(18) 0.0285(7) Uani 1 1 d . C21 C 0.36915(16) 0.1808(5) 0.5928(3) 0.0288(10) Uani 1 1 d . H21A H 0.3865 0.2410 0.5654 0.035 Uiso 1 1 calc R H21B H 0.3608 0.0884 0.5679 0.035 Uiso 1 1 calc R C22 C 0.40128(16) 0.1490(5) 0.6622(3) 0.0302(10) Uani 1 1 d . H22A H 0.3851 0.0818 0.6883 0.036 Uiso 1 1 calc R H22B H 0.4305 0.1013 0.6554 0.036 Uiso 1 1 calc R C23 C 0.48693(16) 0.7481(5) 0.6541(2) 0.0247(9) Uani 1 1 d . H23 H 0.4707 0.7681 0.6897 0.030 Uiso 1 1 calc R C24 C 0.51090(16) 0.8593(5) 0.6303(3) 0.0281(9) Uani 1 1 d . H24 H 0.5117 0.9528 0.6504 0.034 Uiso 1 1 calc R C25 C 0.53411(16) 0.8353(5) 0.5765(3) 0.0293(10) Uani 1 1 d . C26 C 0.53213(15) 0.6941(5) 0.5510(2) 0.0257(9) Uani 1 1 d . H26 H 0.5472 0.6713 0.5145 0.031 Uiso 1 1 calc R C27 C 0.50848(15) 0.5882(5) 0.5782(2) 0.0236(8) Uani 1 1 d . H27 H 0.5082 0.4927 0.5604 0.028 Uiso 1 1 calc R C28 C 0.5603(2) 0.9521(6) 0.5479(3) 0.0404(13) Uani 1 1 d . H28A H 0.5941 0.9299 0.5584 0.061 Uiso 1 1 calc R H28B H 0.5550 1.0454 0.5685 0.061 Uiso 1 1 calc R H28C H 0.5489 0.9573 0.4981 0.061 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pd1 0.01586(18) 0.01686(19) 0.02950(19) 0.00220(10) 0.00998(12) 0.00083(10) N1 0.0182(18) 0.0249(19) 0.043(2) 0.0098(17) 0.0140(16) 0.0031(15) N2 0.0189(17) 0.0146(16) 0.0308(18) 0.0011(13) 0.0106(13) -0.0001(13) Br1 0.0267(3) 0.0236(3) 0.0398(3) 0.00143(18) 0.0149(2) 0.00217(17) C1 0.019(2) 0.021(2) 0.032(2) -0.0005(17) 0.0110(16) -0.0022(17) C2 0.021(2) 0.023(2) 0.027(2) 0.0032(17) 0.0101(15) 0.0008(16) C3 0.023(2) 0.026(2) 0.034(2) -0.0052(18) 0.0153(17) -0.0051(17) C4 0.026(2) 0.023(2) 0.043(3) 0.0004(19) 0.0208(19) 0.0017(18) C5 0.023(2) 0.021(2) 0.038(2) 0.0055(17) 0.0112(18) 0.0026(16) C6 0.0204(19) 0.0156(18) 0.028(2) 0.0026(15) 0.0097(15) -0.0040(15) C7 0.0153(19) 0.020(2) 0.033(2) 0.0040(17) 0.0073(15) 0.0049(16) C8 0.020(2) 0.024(2) 0.035(2) 0.0075(18) 0.0095(16) 0.0032(17) C9 0.020(2) 0.033(2) 0.033(2) 0.0070(19) 0.0106(16) 0.0070(18) C10 0.030(2) 0.032(2) 0.032(2) -0.0008(19) 0.0122(18) 0.003(2) C11 0.031(3) 0.028(2) 0.043(3) -0.003(2) 0.011(2) -0.0002(19) C12 0.0182(19) 0.023(2) 0.029(2) 0.0014(17) 0.0081(16) -0.0010(16) C13 0.022(2) 0.022(2) 0.030(2) -0.0016(17) 0.0083(16) -0.0049(17) C14 0.023(2) 0.021(2) 0.031(2) 0.0019(16) 0.0060(17) -0.0009(16) C15 0.018(2) 0.027(2) 0.032(2) -0.0018(18) 0.0061(16) 0.0001(17) C16 0.019(2) 0.023(2) 0.029(2) -0.0006(16) 0.0102(16) -0.0030(16) C17 0.019(2) 0.023(2) 0.037(2) -0.0001(18) 0.0114(17) 0.0002(16) C18 0.020(2) 0.019(2) 0.037(2) -0.0049(17) 0.0122(17) -0.0010(16) C19 0.031(3) 0.027(3) 0.074(4) 0.011(3) 0.021(3) 0.009(2) O1 0.0183(15) 0.0262(17) 0.0473(19) 0.0038(14) 0.0115(13) 0.0046(12) C20 0.027(2) 0.034(3) 0.046(3) 0.012(2) 0.020(2) 0.0076(19) O2 0.0199(15) 0.0294(17) 0.0404(17) 0.0067(14) 0.0157(13) 0.0037(13) C21 0.023(2) 0.020(2) 0.048(3) -0.0054(19) 0.0174(19) -0.0029(17) C22 0.020(2) 0.017(2) 0.057(3) 0.009(2) 0.0172(19) 0.0000(17) C23 0.025(2) 0.018(2) 0.034(2) -0.0006(16) 0.0132(17) 0.0038(16) C24 0.025(2) 0.020(2) 0.041(2) -0.0046(18) 0.0119(18) -0.0020(17) C25 0.021(2) 0.024(2) 0.045(3) 0.0028(19) 0.0111(18) -0.0018(17) C26 0.021(2) 0.027(2) 0.032(2) -0.0002(18) 0.0119(16) -0.0002(17) C27 0.020(2) 0.022(2) 0.029(2) 0.0021(17) 0.0079(16) 0.0006(17) C28 0.045(3) 0.029(3) 0.056(3) -0.002(2) 0.030(3) -0.008(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Br Br -0.6763 1.2805 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd 0.1215 3.9337 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 Pd1 N1 88.20(17) C1 Pd1 N2 88.82(17) N1 Pd1 N2 176.71(16) C1 Pd1 Br1 178.03(13) N1 Pd1 Br1 90.08(11) N2 Pd1 Br1 92.88(10) C22 N1 Pd1 119.8(3) C23 N2 C27 117.8(4) C23 N2 Pd1 123.9(3) C27 N2 Pd1 118.3(3) C6 C1 C2 120.0(4) C6 C1 Pd1 121.6(3) C2 C1 Pd1 118.4(3) C3 C2 C1 120.7(4) C4 C3 C2 119.9(4) C3 C4 C5 119.5(4) C4 C5 C6 121.3(4) C1 C6 C5 118.6(4) C1 C6 C7 120.6(4) C5 C6 C7 120.8(4) C8 C7 C12 119.0(4) C8 C7 C6 120.7(4) C12 C7 C6 120.3(4) C9 C8 C7 121.7(5) C8 C9 C10 118.9(4) C11 C10 C9 120.5(5) C10 C11 C12 120.8(5) C11 C12 C7 119.0(4) C11 C12 C13 119.9(4) C7 C12 C13 121.0(4) C18 C13 C14 119.2(4) C18 C13 C12 123.2(4) C14 C13 C12 117.5(4) C15 C14 C13 121.4(4) O1 C15 C14 125.0(4) O1 C15 C16 115.7(4) C14 C15 C16 119.3(4) O2 C16 C17 125.8(4) O2 C16 C15 115.0(4) C17 C16 C15 119.2(4) C16 C17 C18 122.2(4) C13 C18 C17 118.7(4) C13 C18 C21 122.9(4) C17 C18 C21 118.3(4) C15 O1 C19 116.9(4) C16 O2 C20 117.0(4) C18 C21 C22 112.6(4) N1 C22 C21 110.8(4) N2 C23 C24 122.6(4) C23 C24 C25 120.5(4) C26 C25 C24 116.1(4) C26 C25 C28 121.0(5) C24 C25 C28 122.9(5) C27 C26 C25 120.3(4) N2 C27 C26 122.8(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Pd1 C1 2.000(5) Pd1 N1 2.067(4) Pd1 N2 2.071(4) Pd1 Br1 2.5557(6) N1 C22 1.461(7) N2 C23 1.331(6) N2 C27 1.351(6) C1 C6 1.391(6) C1 C2 1.392(6) C2 C3 1.382(6) C3 C4 1.381(7) C4 C5 1.389(7) C5 C6 1.394(6) C6 C7 1.492(6) C7 C8 1.391(6) C7 C12 1.412(6) C8 C9 1.385(7) C9 C10 1.388(7) C10 C11 1.387(7) C11 C12 1.393(7) C12 C13 1.491(6) C13 C18 1.392(6) C13 C14 1.412(7) C14 C15 1.382(7) C15 O1 1.371(6) C15 C16 1.408(6) C16 O2 1.364(5) C16 C17 1.377(6) C17 C18 1.405(6) C18 C21 1.511(6) C19 O1 1.413(6) C20 O2 1.415(6) C21 C22 1.525(7) C23 C24 1.380(7) C24 C25 1.401(7) C25 C26 1.396(7) C25 C28 1.501(7) C26 C27 1.372(6) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N1 H01A Br1 0.84(4) 2.54(4) 3.364(4) 167(5) 2_656 C24 H24 Br1 0.95 2.82 3.692(5) 153.1 1_565