#------------------------------------------------------------------------------ #$Date: 2015-12-18 14:45:58 +0200 (Fri, 18 Dec 2015) $ #$Revision: 171603 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/11/81/7118163.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7118163 loop_ _publ_author_name 'Abigail E. Hooper' 'Stuart R. Kennedy' 'Christopher D. Jones' 'Jonathan W. Steed' _publ_section_title ; Gelation by supramolecular dimerization of mono(urea)s ; _journal_name_full Chem.Commun. _journal_page_first 198 _journal_paper_doi 10.1039/c5cc06995E _journal_volume 52 _journal_year 2016 _chemical_formula_moiety 'C11 H14 N2 O4' _chemical_formula_sum 'C11 H14 N2 O4' _chemical_formula_weight 238.24 _chemical_name_systematic ; ? ; _space_group_crystal_system triclinic _space_group_IT_number 2 _space_group_name_Hall '-P 1' _space_group_name_H-M_alt 'P -1' _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_date 2015-08-19 _audit_creation_method ; Olex2 1.2 (compiled 2013.09.17 svn.r2790 for OlexSys, GUI svn.r4601) ; _audit_update_record ; 2015-08-19 deposited with the CCDC. 2015-10-30 downloaded from the CCDC. ; _cell_angle_alpha 92.962(5) _cell_angle_beta 94.351(5) _cell_angle_gamma 95.330(5) _cell_formula_units_Z 2 _cell_length_a 4.6214(8) _cell_length_b 8.2787(14) _cell_length_c 14.248(2) _cell_measurement_reflns_used 1407 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 22.64 _cell_measurement_theta_min 2.48 _cell_volume 540.25(15) _computing_molecular_graphics ; O. V. Dolomanov, L. J. Bourhis, R. J. Gildea, J. A. K. Howard and H. Puschmann, OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Cryst. (2009). 42, 339-341. ; _computing_publication_material ; O. V. Dolomanov, L. J. Bourhis, R. J. Gildea, J. A. K. Howard and H. Puschmann, OLEX2: a complete structure solution, refinement and analysis program. J. Appl. Cryst. (2009). 42, 339-341. ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 120(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0543 _diffrn_reflns_av_unetI/netI 0.0642 _diffrn_reflns_limit_h_max 4 _diffrn_reflns_limit_h_min -5 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 4645 _diffrn_reflns_theta_full 22.64 _diffrn_reflns_theta_max 22.64 _diffrn_reflns_theta_min 2.48 _diffrn_source 'fine-focus sealed tube' _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.113 _exptl_absorpt_correction_T_max 0.7448 _exptl_absorpt_correction_T_min 0.6312 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '? was used for absorption correction. wR2(int) was 0.1060 before and 0.0561 after correction. The Ratio of minimum to maximum transmission is 0.8475. The \l/2 correction factor is 0.00150.' _exptl_crystal_colour colourless _exptl_crystal_colour_primary colourless _exptl_crystal_density_diffrn 1.465 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 252 _exptl_crystal_size_max 0.24 _exptl_crystal_size_mid 0.13 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.208 _refine_diff_density_min -0.243 _refine_diff_density_rms 0.055 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.023 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 155 _refine_ls_number_reflns 1418 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.023 _refine_ls_R_factor_all 0.0838 _refine_ls_R_factor_gt 0.0472 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0459P)^2^+0.0998P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0942 _refine_ls_wR_factor_ref 0.1054 _reflns_number_gt 956 _reflns_number_total 1418 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c5cc06995e2.cif _cod_data_source_block 1c _cod_original_cell_volume 540.23(16) _cod_database_code 7118163 _olex2_refinement_description ; 1. Others Fixed Uiso: H1A(0.038) H1B(0.038) H1C(0.038) H2O(0.024) H2A(0.02) H2B(0.02) H3A(0.02) H3B(0.02) H4O(0.025) H4A(0.02) H6(0.021) H8(0.018) H11(0.02) H12(0.02) Fixed X: H1A(1.0273) H1B(1.3469) H1C(1.1225) H2O(1.0554) H2A(1.3674) H2B(1.4721) H3A(0.9865) H3B(0.9084) H4O(0.3486) H4A(1.3721) H6(1.3294) H8(1.2897) H11(0.4802) H12(0.6797) Fixed Y: H1A(0.9115) H1B(0.8787) H1C(0.7305) H2O(0.7746) H2A(0.9848) H2B(0.8056) H3A(0.7013) H3B(0.8849) H4O(0.4527) H4A(0.8375) H6(0.8078) H8(0.8755) H11(0.4919) H12(0.5725) Fixed Z: H1A(1.4278) H1B(1.4691) H1C(1.425) H2O(0.6122) H2A(1.3183) H2B(1.317) H3A(1.2558) H3B(1.2482) H4O(0.5651) H4A(1.15) H6(0.997) H8(0.8351) H11(0.7934) H12(0.9443) ; loop_ _space_group_symop_id _space_group_symop_operation_xyz 1 'x, y, z' 2 '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group O1 O 0.7342(4) 0.7784(3) 1.07618(13) 0.0228(6) Uani 1 1 d . . . C1 C 1.1897(7) 0.8452(4) 1.4199(2) 0.0251(9) Uani 1 1 d . . . H1A H 1.0273 0.9115 1.4278 0.038 Uiso 1 1 calc R . . H1B H 1.3469 0.8787 1.4691 0.038 Uiso 1 1 calc R . . H1C H 1.1225 0.7305 1.4250 0.038 Uiso 1 1 calc R . . O2 O 1.1427(4) 0.8127(2) 0.66357(13) 0.0203(6) Uani 1 1 d . . . H2O H 1.0554 0.7746 0.6122 0.024 Uiso 1 1 calc R . . C2 C 1.3022(6) 0.8685(4) 1.32373(19) 0.0171(8) Uani 1 1 d . . . H2A H 1.3674 0.9848 1.3183 0.020 Uiso 1 1 calc R . . H2B H 1.4721 0.8056 1.3170 0.020 Uiso 1 1 calc R . . O3 O 0.7509(4) 0.6282(2) 0.55572(13) 0.0204(6) Uani 1 1 d . . . C3 C 1.0682(6) 0.8134(4) 1.24591(19) 0.0171(8) Uani 1 1 d . . . H3A H 0.9865 0.7013 1.2558 0.020 Uiso 1 1 calc R . . H3B H 0.9084 0.8849 1.2482 0.020 Uiso 1 1 calc R . . O4 O 0.4056(4) 0.4762(2) 0.62195(13) 0.0212(6) Uani 1 1 d . . . H4O H 0.3486 0.4527 0.5651 0.025 Uiso 1 1 calc R . . N4 N 1.1832(5) 0.8175(3) 1.15396(15) 0.0165(7) Uani 1 1 d . . . H4A H 1.3721 0.8375 1.1500 0.020 Uiso 1 1 calc R . . C5 C 1.0046(7) 0.7911(4) 1.0753(2) 0.0178(8) Uani 1 1 d . . . N6 N 1.1398(5) 0.7814(3) 0.99304(15) 0.0179(7) Uani 1 1 d . . . H6 H 1.3294 0.8078 0.9970 0.021 Uiso 1 1 calc R . . C7 C 1.0039(6) 0.7332(4) 0.90312(19) 0.0154(8) Uani 1 1 d . . . C8 C 1.1252(6) 0.7969(3) 0.8262(2) 0.0149(8) Uani 1 1 d . . . H8 H 1.2897 0.8755 0.8351 0.018 Uiso 1 1 calc R . . C9 C 1.0086(6) 0.7470(4) 0.7362(2) 0.0153(8) Uani 1 1 d . . . C10 C 0.7637(6) 0.6323(3) 0.72195(19) 0.0135(7) Uani 1 1 d . . . C11 C 0.6459(6) 0.5698(4) 0.8016(2) 0.0167(8) Uani 1 1 d . . . H11 H 0.4802 0.4919 0.7934 0.020 Uiso 1 1 calc R . . C12 C 0.7621(6) 0.6174(3) 0.8912(2) 0.0166(8) Uani 1 1 d . . . H12 H 0.6797 0.5725 0.9443 0.020 Uiso 1 1 calc R . . C13 C 0.6415(7) 0.5804(4) 0.6272(2) 0.0170(8) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0090(14) 0.0416(15) 0.0171(12) -0.0037(10) -0.0002(10) 0.0035(11) C1 0.024(2) 0.033(2) 0.0165(18) -0.0015(16) -0.0037(15) -0.0004(17) O2 0.0207(13) 0.0291(13) 0.0095(12) 0.0014(10) -0.0005(10) -0.0046(10) C2 0.0127(18) 0.0259(19) 0.0124(17) 0.0029(14) 0.0005(13) 0.0002(15) O3 0.0195(13) 0.0298(14) 0.0105(12) 0.0018(10) -0.0008(10) -0.0030(10) C3 0.0093(18) 0.0247(19) 0.0170(19) -0.0004(15) 0.0025(14) 0.0007(15) O4 0.0220(13) 0.0270(13) 0.0118(11) -0.0019(10) -0.0052(10) -0.0057(11) N4 0.0082(14) 0.0301(17) 0.0100(14) 0.0019(12) -0.0014(11) -0.0038(12) C5 0.016(2) 0.0208(19) 0.0160(19) -0.0029(15) 0.0012(16) 0.0033(16) N6 0.0072(14) 0.0331(17) 0.0128(15) -0.0012(12) 0.0006(12) 0.0003(12) C7 0.0145(18) 0.0191(19) 0.0121(18) -0.0025(15) -0.0040(14) 0.0055(15) C8 0.0110(18) 0.0178(18) 0.0155(18) 0.0019(15) -0.0012(14) 0.0007(14) C9 0.0147(19) 0.0191(19) 0.0132(18) 0.0028(15) 0.0022(14) 0.0064(15) C10 0.0116(18) 0.0142(18) 0.0145(18) -0.0032(14) -0.0005(14) 0.0035(15) C11 0.0122(18) 0.0193(18) 0.0180(19) 0.0021(15) -0.0019(14) 0.0006(14) C12 0.0155(18) 0.0204(19) 0.0151(18) 0.0017(15) 0.0054(14) 0.0033(15) C13 0.0141(19) 0.0163(19) 0.020(2) -0.0024(15) 0.0020(15) 0.0013(16) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 C3 C2 C1 111.0(2) . . N4 C3 C2 111.3(2) . . C5 N4 C3 120.6(2) . . O1 C5 N4 122.5(3) . . O1 C5 N6 122.2(3) . . N4 C5 N6 115.3(3) . . C5 N6 C7 126.1(3) . . C8 C7 N6 118.0(3) . . C8 C7 C12 120.6(3) . . C12 C7 N6 121.3(3) . . C7 C8 C9 120.2(3) . . O2 C9 C8 117.0(3) . . O2 C9 C10 122.4(2) . . C8 C9 C10 120.6(3) . . C9 C10 C13 120.4(3) . . C11 C10 C9 117.8(3) . . C11 C10 C13 121.8(3) . . C12 C11 C10 122.0(3) . . C11 C12 C7 118.9(3) . . O3 C13 O4 121.8(3) . . O3 C13 C10 122.8(3) . . O4 C13 C10 115.4(3) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 O1 C5 1.245(3) . C1 C2 1.518(4) . O2 C9 1.358(3) . C2 C3 1.510(4) . O3 C13 1.238(3) . C3 N4 1.451(3) . O4 C13 1.320(3) . N4 C5 1.337(4) . C5 N6 1.371(4) . N6 C7 1.405(3) . C7 C8 1.375(4) . C7 C12 1.397(4) . C8 C9 1.380(4) . C9 C10 1.404(4) . C10 C11 1.398(4) . C10 C13 1.451(4) . C11 C12 1.370(4) . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O4 H4O O3 0.84 1.82 2.657(3) 171.1 2_666 N4 H4A O1 0.88 2.12 2.892(3) 145.3 1_655 N6 H6 O1 0.88 2.15 2.911(3) 144.2 1_655