#------------------------------------------------------------------------------ #$Date: 2023-01-26 03:36:31 +0200 (Thu, 26 Jan 2023) $ #$Revision: 280615 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/15/91/7159117.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7159117 loop_ _publ_author_name 'Ferreira, Joana R. M.' 'Alves, Mariana' 'Sousa, B\'arbara' 'Vieira, Sandra I.' 'Silva, Artur M. S.' 'Guieu, Samuel' 'Cunha, \^Angela' 'Nunes da Silva, Raquel' _publ_section_title ; Curcumin-based molecular probes for fluorescence imaging of fungi ; _journal_name_full 'Organic & Biomolecular Chemistry' _journal_paper_doi 10.1039/D2OB01872A _journal_year 2023 _chemical_formula_moiety 'C21 H20 O4' _chemical_formula_sum 'C21 H20 O4' _chemical_formula_weight 336.37 _chemical_name_systematic (1E,4Z,6E)-5-hydroxy-1,7-bis(4-methoxyphenyl)hepta-1,4,6-trien-3-one _space_group_crystal_system monoclinic _space_group_IT_number 15 _space_group_name_Hall '-C 2yc' _space_group_name_H-M_alt 'C 1 2/c 1' _atom_sites_solution_hydrogens mixed _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-2018/3 _audit_update_record ; 2022-03-23 deposited with the CCDC. 2023-01-11 downloaded from the CCDC. ; _cell_angle_alpha 90 _cell_angle_beta 99.087(5) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 11.6910(19) _cell_length_b 10.8177(18) _cell_length_c 13.581(2) _cell_measurement_reflns_used 5722 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 28.30 _cell_measurement_theta_min 2.58 _cell_volume 1696.0(5) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'PLATON (Spek, 2009)' _computing_publication_material 'SHELXL-2014 (Sheldrick, 2014)' _computing_structure_refinement 'SHELXL-2018/3 (Sheldrick, 2018)' _computing_structure_solution 'SHELXL-2014 (Sheldrick, 2014)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 0.993 _diffrn_measurement_device_type ccd _diffrn_measurement_method 'omega and phi scans' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0566 _diffrn_reflns_av_unetI/netI 0.0254 _diffrn_reflns_Laue_measured_fraction_full 1.000 _diffrn_reflns_Laue_measured_fraction_max 0.993 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 19468 _diffrn_reflns_point_group_measured_fraction_full 1.000 _diffrn_reflns_point_group_measured_fraction_max 0.993 _diffrn_reflns_theta_full 25.242 _diffrn_reflns_theta_max 28.439 _diffrn_reflns_theta_min 2.580 _diffrn_source 'fine-focus sealed tube' _exptl_absorpt_coefficient_mu 0.091 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 2008)' _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.317 _exptl_crystal_description block _exptl_crystal_F_000 712 _exptl_crystal_preparation Luminescent _exptl_crystal_recrystallization_method 'Re-crystallisation from solvent: tetrahydrofuran' _exptl_crystal_size_max 0.500 _exptl_crystal_size_mid 0.300 _exptl_crystal_size_min 0.200 _exptl_transmission_factor_max 0.7457 _exptl_transmission_factor_min 0.6585 _refine_diff_density_max 0.256 _refine_diff_density_min -0.227 _refine_diff_density_rms 0.048 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.084 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 118 _refine_ls_number_reflns 2127 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.084 _refine_ls_R_factor_all 0.0646 _refine_ls_R_factor_gt 0.0465 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0715P)^2^+0.9850P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1311 _refine_ls_wR_factor_ref 0.1483 _reflns_Friedel_coverage 0.000 _reflns_number_gt 1602 _reflns_number_total 2127 _reflns_threshold_expression 'I > 2\s(I)' _cod_data_source_file d2ob01872a2.cif _cod_data_source_block shelx _cod_original_cell_volume 1696.1(5) _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 7159117 _shelx_shelxl_version_number 2018/3 _shelx_space_group_comment ; The symmetry employed for this shelxl refinement is uniquely defined by the following loop, which should always be used as a source of symmetry information in preference to the above space-group names. They are only intended as comments. ; _shelx_estimated_absorpt_t_min 0.956 _shelx_estimated_absorpt_t_max 0.982 _shelx_res_file ; TITL orange_a.res in C2/c shelx.res created by SHELXL-2018/3 at 23:44:24 on 26-Oct-2020 CELL 0.71073 11.6910 10.8177 13.5812 90.000 99.087 90.000 ZERR 4.00 0.0019 0.0018 0.0023 0.000 0.005 0.000 LATT 7 SYMM - X, Y, 1/2 - Z SFAC C H O UNIT 84 80 16 MERG 2 FMAP 2 PLAN 20 SIZE 0.200 0.300 0.500 ACTA BOND $H CONF L.S. 99 TEMP -123.00 WGHT 0.071500 0.985000 FVAR 0.08928 O01 3 0.891356 0.698787 0.345648 11.00000 0.04774 0.03198 = 0.03044 -0.00190 -0.00039 0.00644 O02 3 0.555264 0.315536 -0.162911 11.00000 0.03653 0.02783 = 0.04249 0.00233 -0.00019 0.00159 C11 1 0.952462 0.631404 0.428050 11.00000 0.03341 0.04087 = 0.02888 0.00105 0.00289 0.00473 AFIX 137 H11A 2 0.902212 0.566504 0.447868 11.00000 -1.50000 H11C 2 0.975302 0.687757 0.484213 11.00000 -1.50000 H11B 2 1.021782 0.593733 0.408586 11.00000 -1.50000 AFIX 0 C08 1 0.842828 0.633235 0.263659 11.00000 0.02870 0.02946 = 0.02600 0.00055 0.00679 0.00233 C09 1 0.778621 0.702423 0.187311 11.00000 0.04172 0.02521 = 0.03108 0.00149 0.00730 0.00928 AFIX 43 H09 2 0.773129 0.789536 0.194086 11.00000 -1.20000 AFIX 0 C10 1 0.723364 0.645455 0.102513 11.00000 0.03579 0.03042 = 0.02806 0.00501 0.00579 0.00940 AFIX 43 H10 2 0.678629 0.693736 0.052068 11.00000 -1.20000 AFIX 0 C05 1 0.731745 0.517041 0.088940 11.00000 0.02501 0.02788 = 0.02786 0.00371 0.00813 0.00133 C04 1 0.673761 0.452470 0.000623 11.00000 0.02559 0.02830 = 0.03275 0.00178 0.00752 0.00124 AFIX 43 H04 2 0.681741 0.365100 -0.000285 11.00000 -1.20000 AFIX 0 C03 1 0.610308 0.504855 -0.079329 11.00000 0.03303 0.02954 = 0.03051 0.00023 0.00546 0.00325 AFIX 43 H03 2 0.601430 0.592156 -0.079802 11.00000 -1.20000 AFIX 0 C02 1 0.554088 0.435381 -0.165691 11.00000 0.02351 0.03128 = 0.03293 0.00049 0.00699 0.00132 C01 1 0.500000 0.499074 -0.250000 10.50000 0.03315 0.02502 = 0.03105 0.00000 0.00345 0.00000 AFIX 43 H01 2 0.499997 0.586893 -0.249999 10.50000 -1.20000 AFIX 0 C06 1 0.798215 0.450251 0.164790 11.00000 0.02963 0.02269 = 0.03354 0.00465 0.00695 -0.00034 AFIX 43 H06 2 0.806406 0.363590 0.156975 11.00000 -1.20000 AFIX 0 C07 1 0.853144 0.506419 0.251834 11.00000 0.02830 0.02790 = 0.03061 0.00682 0.00511 0.00244 AFIX 43 H07 2 0.897337 0.458346 0.302737 11.00000 -1.20000 AFIX 0 H02 2 0.506155 0.290056 -0.227963 10.50000 -1.50000 HKLF 4 1.0 1.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 1.00 REM orange_a.res in C2/c REM wR2 = 0.1483, GooF = S = 1.084, Restrained GooF = 1.084 for all data REM R1 = 0.0465 for 1602 Fo > 4sig(Fo) and 0.0646 for all 2127 data REM 118 parameters refined using 0 restraints END WGHT 0.0714 0.9919 REM Highest difference peak 0.256, deepest hole -0.227, 1-sigma level 0.048 Q1 1 0.4268 0.2243 -0.2012 11.00000 0.05 0.26 Q2 1 0.6844 0.4835 0.0560 11.00000 0.05 0.24 Q3 1 0.8468 0.4881 0.1970 11.00000 0.05 0.22 Q4 1 0.8342 0.6649 0.2125 11.00000 0.05 0.22 Q5 1 0.4486 0.4677 -0.2770 11.00000 0.05 0.21 Q6 1 0.6069 0.4841 -0.0195 11.00000 0.05 0.21 Q7 1 0.7435 0.4859 0.1431 11.00000 0.05 0.21 Q8 1 0.4957 0.4692 -0.2995 11.00000 0.05 0.20 Q9 1 0.8772 0.5768 0.2461 11.00000 0.05 0.20 Q10 1 0.7826 0.6833 0.1320 11.00000 0.05 0.20 Q11 1 0.6795 0.4806 -0.0529 11.00000 0.05 0.20 Q12 1 0.7974 0.4803 0.2209 11.00000 0.05 0.20 Q13 1 0.5867 0.4768 -0.1267 11.00000 0.05 0.20 Q14 1 0.5631 0.4659 -0.1111 11.00000 0.05 0.20 Q15 1 0.6976 0.5716 0.1033 11.00000 0.05 0.19 Q16 1 0.5157 0.3665 -0.1426 11.00000 0.05 0.17 Q17 1 0.9127 0.6709 0.2954 11.00000 0.05 0.16 Q18 1 0.8139 0.5685 0.2711 11.00000 0.05 0.15 Q19 1 0.5903 0.4637 0.0338 11.00000 0.05 0.15 Q20 1 0.8594 0.6649 0.3162 11.00000 0.05 0.15 ; _shelx_res_checksum 93586 loop_ _space_group_symop_operation_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_site_symmetry_order _atom_site_calc_flag _atom_site_refinement_flags_posn _atom_site_refinement_flags_adp _atom_site_refinement_flags_occupancy _atom_site_disorder_assembly _atom_site_disorder_group O01 O 0.89136(10) 0.69879(9) 0.34565(7) 0.0374(3) Uani 1 1 d . . . . . O02 O 0.55526(9) 0.31554(10) -0.16291(8) 0.0363(3) Uani 1 1 d . . . . . C11 C 0.95246(13) 0.63140(14) 0.42805(10) 0.0346(3) Uani 1 1 d . . . . . H11A H 0.902212 0.566504 0.447868 0.052 Uiso 1 1 calc R U . . . H11C H 0.975302 0.687757 0.484213 0.052 Uiso 1 1 calc R U . . . H11B H 1.021782 0.593733 0.408586 0.052 Uiso 1 1 calc R U . . . C08 C 0.84283(11) 0.63323(13) 0.26366(10) 0.0278(3) Uani 1 1 d . . . . . C09 C 0.77862(13) 0.70242(13) 0.18731(11) 0.0325(3) Uani 1 1 d . . . . . H09 H 0.773129 0.789536 0.194086 0.039 Uiso 1 1 calc R U . . . C10 C 0.72336(13) 0.64545(13) 0.10251(10) 0.0313(3) Uani 1 1 d . . . . . H10 H 0.678629 0.693736 0.052068 0.038 Uiso 1 1 calc R U . . . C05 C 0.73174(11) 0.51704(12) 0.08894(10) 0.0265(3) Uani 1 1 d . . . . . C04 C 0.67376(11) 0.45247(13) 0.00062(10) 0.0286(3) Uani 1 1 d . . . . . H04 H 0.681741 0.365100 -0.000285 0.034 Uiso 1 1 calc R U . . . C03 C 0.61031(12) 0.50485(14) -0.07933(10) 0.0310(3) Uani 1 1 d . . . . . H03 H 0.601430 0.592156 -0.079802 0.037 Uiso 1 1 calc R U . . . C02 C 0.55409(11) 0.43538(14) -0.16569(9) 0.0290(3) Uani 1 1 d . . . . . C01 C 0.500000 0.49907(18) -0.250000 0.0299(4) Uani 1 2 d S T P . . H01 H 0.499997 0.586893 -0.249999 0.036 Uiso 1 2 calc R U P . . C06 C 0.79822(11) 0.45025(12) 0.16479(10) 0.0284(3) Uani 1 1 d . . . . . H06 H 0.806406 0.363590 0.156975 0.034 Uiso 1 1 calc R U . . . C07 C 0.85314(11) 0.50642(13) 0.25183(10) 0.0289(3) Uani 1 1 d . . . . . H07 H 0.897337 0.458346 0.302737 0.035 Uiso 1 1 calc R U . . . H02 H 0.506(4) 0.290(3) -0.228(3) 0.043 Uiso 0.5 1 d . U P . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O01 0.0477(6) 0.0320(6) 0.0304(5) -0.0019(4) -0.0004(4) 0.0064(4) O02 0.0365(6) 0.0278(6) 0.0425(6) 0.0023(4) -0.0002(5) 0.0016(4) C11 0.0334(7) 0.0409(8) 0.0289(7) 0.0010(6) 0.0029(5) 0.0047(6) C08 0.0287(7) 0.0295(7) 0.0260(6) 0.0005(5) 0.0068(5) 0.0023(5) C09 0.0417(8) 0.0252(7) 0.0311(7) 0.0015(5) 0.0073(6) 0.0093(6) C10 0.0358(7) 0.0304(7) 0.0281(7) 0.0050(5) 0.0058(5) 0.0094(6) C05 0.0250(6) 0.0279(7) 0.0279(6) 0.0037(5) 0.0081(5) 0.0013(5) C04 0.0256(6) 0.0283(7) 0.0327(7) 0.0018(5) 0.0075(5) 0.0012(5) C03 0.0330(7) 0.0295(7) 0.0305(7) 0.0002(5) 0.0055(5) 0.0033(5) C02 0.0235(6) 0.0313(7) 0.0329(7) 0.0005(5) 0.0070(5) 0.0013(5) C01 0.0331(10) 0.0250(9) 0.0310(10) 0.000 0.0035(7) 0.000 C06 0.0296(7) 0.0227(6) 0.0335(7) 0.0046(5) 0.0070(5) -0.0003(5) C07 0.0283(7) 0.0279(7) 0.0306(7) 0.0068(5) 0.0051(5) 0.0024(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C08 O01 C11 117.75(11) . . ? C02 O02 H02 104.2(17) . . ? O01 C11 H11A 109.5 . . ? O01 C11 H11C 109.5 . . ? H11A C11 H11C 109.5 . . ? O01 C11 H11B 109.5 . . ? H11A C11 H11B 109.5 . . ? H11C C11 H11B 109.5 . . ? O01 C08 C07 125.08(12) . . ? O01 C08 C09 115.60(12) . . ? C07 C08 C09 119.31(12) . . ? C10 C09 C08 120.53(13) . . ? C10 C09 H09 119.7 . . ? C08 C09 H09 119.7 . . ? C09 C10 C05 121.29(12) . . ? C09 C10 H10 119.4 . . ? C05 C10 H10 119.4 . . ? C06 C05 C10 117.28(12) . . ? C06 C05 C04 119.53(12) . . ? C10 C05 C04 123.19(12) . . ? C03 C04 C05 126.12(13) . . ? C03 C04 H04 116.9 . . ? C05 C04 H04 116.9 . . ? C04 C03 C02 123.71(14) . . ? C04 C03 H03 118.1 . . ? C02 C03 H03 118.1 . . ? O02 C02 C01 121.16(13) . . ? O02 C02 C03 119.35(12) . . ? C01 C02 C03 119.49(14) . . ? C02 C01 C02 120.99(18) . 2_654 ? C02 C01 H01 119.5 . . ? C02 C01 H01 119.5 2_654 . ? C05 C06 C07 122.07(12) . . ? C05 C06 H06 119.0 . . ? C07 C06 H06 119.0 . . ? C08 C07 C06 119.50(12) . . ? C08 C07 H07 120.3 . . ? C06 C07 H07 120.3 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag O01 C08 1.3657(16) . ? O01 C11 1.4288(16) . ? O02 C02 1.2970(18) . ? O02 H02 1.01(4) . ? C11 H11A 0.9800 . ? C11 H11C 0.9800 . ? C11 H11B 0.9800 . ? C08 C07 1.3887(19) . ? C08 C09 1.3975(18) . ? C09 C10 1.3742(19) . ? C09 H09 0.9500 . ? C10 C05 1.4068(19) . ? C10 H10 0.9500 . ? C05 C06 1.3908(17) . ? C05 C04 1.4592(18) . ? C04 C03 1.3402(18) . ? C04 H04 0.9500 . ? C03 C02 1.4591(18) . ? C03 H03 0.9500 . ? C02 C01 1.3989(16) . ? C01 H01 0.9500 . ? C06 C07 1.3926(18) . ? C06 H06 0.9500 . ? C07 H07 0.9500 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C11 O01 C08 C07 -3.5(2) . . . . ? C11 O01 C08 C09 176.60(12) . . . . ? O01 C08 C09 C10 -178.22(12) . . . . ? C07 C08 C09 C10 1.9(2) . . . . ? C08 C09 C10 C05 -1.5(2) . . . . ? C09 C10 C05 C06 0.0(2) . . . . ? C09 C10 C05 C04 179.42(12) . . . . ? C06 C05 C04 C03 -177.72(13) . . . . ? C10 C05 C04 C03 2.9(2) . . . . ? C05 C04 C03 C02 -179.93(12) . . . . ? C04 C03 C02 O02 6.7(2) . . . . ? C04 C03 C02 C01 -173.24(11) . . . . ? O02 C02 C01 C02 -0.34(9) . . . 2_654 ? C03 C02 C01 C02 179.60(13) . . . 2_654 ? C10 C05 C06 C07 1.09(19) . . . . ? C04 C05 C06 C07 -178.37(11) . . . . ? O01 C08 C07 C06 179.29(12) . . . . ? C09 C08 C07 C06 -0.8(2) . . . . ? C05 C06 C07 C08 -0.7(2) . . . . ?