#------------------------------------------------------------------------------ #$Date: 2015-01-23 14:30:19 +0200 (Fri, 23 Jan 2015) $ #$Revision: 130086 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/20/76/7207653.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7207653 loop_ _publ_author_name 'Rossi, Denise' 'Gelbrich, Thomas' 'Kahlenberg, Volker' 'Griesser, Ulrich J.' _publ_section_title ; Supramolecular constructs and thermodynamic stability of four polymorphs and a co-crystal of pentobarbital (nembutal) ; _journal_issue 7 _journal_name_full CrystEngComm _journal_page_first 2494 _journal_paper_doi 10.1039/c2ce06659a _journal_volume 14 _journal_year 2012 _chemical_formula_moiety 'C11 H18 N2 O3' _chemical_formula_sum 'C11 H18 N2 O3' _chemical_formula_weight 226.27 _chemical_name_common 'pentobarbital, nembutal' _chemical_name_systematic ; 5-ethyl,5-(1-methylbutyl)barbituric acid ; _space_group_IT_number 13 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yc' _symmetry_space_group_name_H-M 'P 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 110.205(6) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.7361(6) _cell_length_b 11.1568(9) _cell_length_c 10.1886(6) _cell_measurement_reflns_used 2641 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 67.1325 _cell_measurement_theta_min 3.9613 _cell_volume 1251.97(15) _computing_cell_refinement ; CrysAlisPro, Oxford Diffraction Ltd., ; _computing_data_collection ; CrysAlisPro, Oxford Diffraction Ltd., ; _computing_data_reduction ; CrysAlisPro, Oxford Diffraction Ltd., ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173(2) _diffrn_detector_area_resol_mean 10.3575 _diffrn_measured_fraction_theta_full 0.951 _diffrn_measured_fraction_theta_max 0.951 _diffrn_measurement_device_type 'Xcalibur, Ruby, Gemini ultra' _diffrn_radiation_monochromator mirror _diffrn_radiation_source 'Enhance Ultra (Cu) X-ray Source' _diffrn_radiation_type 'Cu K\a' _diffrn_radiation_wavelength 1.5418 _diffrn_reflns_av_R_equivalents 0.0596 _diffrn_reflns_av_sigmaI/netI 0.0541 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 6203 _diffrn_reflns_theta_full 66.50 _diffrn_reflns_theta_max 66.50 _diffrn_reflns_theta_min 5.64 _exptl_absorpt_coefficient_mu 0.722 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_correction_T_min 0.61046 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; CrysAlisPro, Oxford Diffraction Ltd., Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_crystal_density_diffrn 1.200 _exptl_crystal_density_meas colourless _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 488 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.424 _refine_diff_density_min -0.229 _refine_diff_density_rms 0.050 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.056 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 162 _refine_ls_number_reflns 2098 _refine_ls_number_restraints 30 _refine_ls_restrained_S_all 1.062 _refine_ls_R_factor_all 0.1233 _refine_ls_R_factor_gt 0.0880 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0100P)^2^+2.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1612 _refine_ls_wR_factor_ref 0.1740 _reflns_number_gt 1330 _reflns_number_total 2098 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c2ce06659a.txt _[local]_cod_data_source_block Nbtl-I _[local]_cod_cif_authors_sg_H-M P2/c _cod_original_cell_volume 1251.97(14) _cod_database_code 7207653 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O2 O 0.4378(2) 0.1330(3) 0.5801(2) 0.0707(9) Uani 1 1 d . O4 O 0.6623(2) 0.1344(3) 0.3032(2) 0.0749(10) Uani 1 1 d . O6 O 0.8372(2) 0.2031(3) 0.7918(2) 0.0639(8) Uani 1 1 d . N1 N 0.6397(2) 0.1645(3) 0.6844(3) 0.0496(8) Uani 1 1 d D H1 H 0.641(4) 0.158(4) 0.7689(19) 0.080(14) Uiso 1 1 d D N3 N 0.5519(2) 0.1499(3) 0.4432(3) 0.0522(9) Uani 1 1 d D H3 H 0.4884(19) 0.151(3) 0.369(2) 0.049(10) Uiso 1 1 d D C2 C 0.5378(3) 0.1489(4) 0.5715(3) 0.0484(9) Uani 1 1 d . C4 C 0.6608(3) 0.1520(4) 0.4205(3) 0.0529(10) Uani 1 1 d . C5 C 0.7753(3) 0.1805(3) 0.5422(3) 0.0570(11) Uani 1 1 d D C6 C 0.7551(3) 0.1859(4) 0.6839(3) 0.0473(9) Uani 1 1 d . C7 C 0.8721(3) 0.0839(4) 0.5527(4) 0.0773(17) Uani 1 1 d D H7A H 0.8789 0.0735 0.4593 0.101(16) Uiso 1 1 calc R H7B H 0.9514 0.1133 0.6167 0.071(12) Uiso 1 1 calc R C8 C 0.8473(4) -0.0382(4) 0.6045(5) 0.0774(15) Uani 1 1 d D H8A H 0.8493 -0.0310 0.7011 0.077(13) Uiso 1 1 calc R H8B H 0.9095 -0.0953 0.6007 0.12(2) Uiso 1 1 calc R H8C H 0.7671 -0.0668 0.5449 0.112(18) Uiso 1 1 calc R C9 C 0.8238(4) 0.3031(4) 0.5188(5) 0.0800(14) Uani 1 1 d D H9 H 0.8916 0.3217 0.6078 0.116(19) Uiso 1 1 calc R C10 C 0.8805(5) 0.3060(6) 0.4048(6) 0.1003(18) Uani 1 1 d D H10A H 0.8167 0.2978 0.3130 0.150 Uiso 1 1 calc R H10B H 0.9384 0.2398 0.4190 0.150 Uiso 1 1 calc R H10C H 0.9230 0.3823 0.4091 0.150 Uiso 1 1 calc R C11 C 0.7299(5) 0.3990(4) 0.5047(6) 0.0987(18) Uani 1 1 d D H11A H 0.6945 0.3874 0.5790 0.118 Uiso 1 1 calc R H11B H 0.6637 0.3892 0.4135 0.118 Uiso 1 1 calc R C12 C 0.7788(8) 0.5260(6) 0.5145(9) 0.148(3) Uani 1 1 d D H12A H 0.8100 0.5418 0.4374 0.178 Uiso 1 1 calc R H12B H 0.8457 0.5382 0.6046 0.178 Uiso 1 1 calc R C13 C 0.6730(9) 0.6091(9) 0.5036(11) 0.215(5) Uani 1 1 d D H13A H 0.6089 0.5981 0.4125 0.323 Uiso 1 1 calc R H13B H 0.7010 0.6925 0.5130 0.323 Uiso 1 1 calc R H13C H 0.6411 0.5902 0.5783 0.323 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O2 0.0313(12) 0.144(3) 0.0401(13) -0.0066(15) 0.0168(11) -0.0105(15) O4 0.0318(12) 0.162(3) 0.0302(12) 0.0010(15) 0.0100(10) -0.0028(15) O6 0.0362(13) 0.115(2) 0.0341(12) -0.0059(14) 0.0040(10) -0.0084(14) N1 0.0320(13) 0.090(3) 0.0268(13) 0.0020(14) 0.0105(11) -0.0011(14) N3 0.0261(13) 0.103(3) 0.0274(13) 0.0000(15) 0.0088(11) -0.0031(15) C2 0.0288(16) 0.084(3) 0.0311(15) -0.0016(17) 0.0086(13) -0.0040(17) C4 0.0296(16) 0.096(3) 0.0318(16) 0.0050(18) 0.0096(13) -0.0067(18) C5 0.0302(16) 0.106(4) 0.0337(17) 0.0043(19) 0.0095(14) -0.0122(19) C6 0.0316(16) 0.077(3) 0.0299(16) 0.0016(16) 0.0067(13) -0.0057(17) C7 0.0236(16) 0.177(6) 0.0313(18) -0.006(2) 0.0099(14) 0.010(2) C8 0.038(2) 0.114(4) 0.073(3) -0.021(3) 0.010(2) 0.003(2) C9 0.072(3) 0.100(4) 0.065(3) 0.003(3) 0.020(2) -0.022(3) C11 0.113(5) 0.088(4) 0.093(4) 0.006(3) 0.033(3) -0.031(4) C12 0.154(7) 0.120(7) 0.169(8) 0.014(5) 0.054(6) -0.013(6) C13 0.186(10) 0.183(10) 0.228(11) 0.084(9) 0.008(9) 0.054(9) C10 0.097(4) 0.120(5) 0.097(4) 0.016(3) 0.050(3) -0.016(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C6 126.9(3) C2 N1 H1 123(3) C6 N1 H1 110(3) C2 N3 C4 125.8(3) C2 N3 H3 119(2) C4 N3 H3 115(2) O2 C2 N1 123.2(3) O2 C2 N3 120.4(3) N1 C2 N3 116.4(3) O4 C4 N3 119.5(3) O4 C4 C5 121.8(3) N3 C4 C5 118.6(3) C4 C5 C9 109.4(3) C4 C5 C7 109.5(3) C9 C5 C7 109.3(3) C4 C5 C6 113.3(2) C9 C5 C6 107.2(3) C7 C5 C6 108.0(3) O6 C6 N1 120.2(3) O6 C6 C5 122.0(3) N1 C6 C5 117.8(3) C8 C7 C5 115.1(3) C8 C7 H7A 108.5 C5 C7 H7A 108.5 C8 C7 H7B 108.5 C5 C7 H7B 108.5 H7A C7 H7B 107.5 C7 C8 H8A 109.5 C7 C8 H8B 109.5 H8A C8 H8B 109.5 C7 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 C11 C9 C10 114.2(4) C11 C9 C5 110.5(3) C10 C9 C5 114.9(4) C11 C9 H9 105.4 C10 C9 H9 105.4 C5 C9 H9 105.4 C9 C11 C12 114.1(5) C9 C11 H11A 108.7 C12 C11 H11A 108.7 C9 C11 H11B 108.7 C12 C11 H11B 108.7 H11A C11 H11B 107.6 C11 C12 C13 106.4(7) C11 C12 H12A 110.4 C13 C12 H12A 110.4 C11 C12 H12B 110.4 C13 C12 H12B 110.4 H12A C12 H12B 108.6 C12 C13 H13A 109.5 C12 C13 H13B 109.5 H13A C13 H13B 109.5 C12 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 C9 C10 H10A 109.5 C9 C10 H10B 109.5 H10A C10 H10B 109.5 C9 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O2 C2 1.219(4) O4 C4 1.217(4) O6 C6 1.201(4) N1 C2 1.354(4) N1 C6 1.377(4) N1 H1 0.859(10) N3 C2 1.373(4) N3 C4 1.375(4) N3 H3 0.859(10) C4 C5 1.514(4) C5 C9 1.532(4) C5 C7 1.542(4) C5 C6 1.543(4) C7 C8 1.525(5) C7 H7A 0.9900 C7 H7B 0.9900 C8 H8A 0.9800 C8 H8B 0.9800 C8 H8C 0.9800 C9 C11 1.508(5) C9 C10 1.525(4) C9 H9 1.0000 C11 C12 1.519(5) C11 H11A 0.9900 C11 H11B 0.9900 C12 C13 1.522(6) C12 H12A 0.9900 C12 H12B 0.9900 C13 H13A 0.9800 C13 H13B 0.9800 C13 H13C 0.9800 C10 H10A 0.9800 C10 H10B 0.9800 C10 H10C 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N1 H1 O2 0.859(10) 2.07(2) 2.867(3) 154(4) 2_656 N3 H3 O4 0.859(10) 2.025(12) 2.880(3) 173(4) 2_655