#------------------------------------------------------------------------------ #$Date: 2016-03-26 18:12:22 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180416 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/20/85/7208517.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7208517 loop_ _publ_author_name 'Aaker\"oy, Christer B.' 'Chopade, Prashant D.' 'Ganser, Claudia' 'Rajbanshi, Arbin' 'Desper, John' _publ_section_title ; Exploring the structural landscape of 2-aminopyrazines via co-crystallizations ; _journal_issue 18 _journal_name_full CrystEngComm _journal_page_first 5845 _journal_paper_doi 10.1039/c2ce25516b _journal_volume 14 _journal_year 2012 _chemical_formula_moiety ; (C4 H5 N3) (C5 H8 O4) ; _chemical_formula_sum 'C9 H13 N3 O4' _chemical_formula_weight 227.22 _chemical_name_systematic ; D8 2-aminopyrazine, HOOC-(CH2)3-COOH ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 104.958(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.2487(3) _cell_length_b 29.2633(18) _cell_length_c 7.2357(5) _cell_measurement_reflns_used 3517 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 32.53 _cell_measurement_theta_min 2.91 _cell_volume 1073.70(12) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.979 _diffrn_measured_fraction_theta_max 0.979 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0284 _diffrn_reflns_av_sigmaI/netI 0.0304 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 41 _diffrn_reflns_limit_k_min -43 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 10113 _diffrn_reflns_theta_full 32.02 _diffrn_reflns_theta_max 32.02 _diffrn_reflns_theta_min 1.39 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.112 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.406 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 480 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.247 _refine_diff_density_min -0.241 _refine_diff_density_rms 0.049 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.066 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 157 _refine_ls_number_reflns 3662 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.066 _refine_ls_R_factor_all 0.0707 _refine_ls_R_factor_gt 0.0485 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0700P)^2^+0.1000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1322 _refine_ls_wR_factor_ref 0.1459 _reflns_number_gt 2548 _reflns_number_total 3662 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c2ce25516b.txt _cod_data_source_block B1.A24 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1891 2012-01-12 08:04:46Z andrius ; _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 7208517 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags N11 N 0.5284(2) 0.63776(3) 0.28266(15) 0.0419(2) Uani 1 1 d . C12 C 0.7652(2) 0.64913(4) 0.38976(17) 0.0381(2) Uani 1 1 d . N12 N 0.9424(2) 0.61615(4) 0.45322(19) 0.0528(3) Uani 1 1 d . H12A H 0.902(3) 0.5866(7) 0.422(2) 0.063 Uiso 1 1 d . H12B H 1.089(4) 0.6232(7) 0.524(3) 0.063 Uiso 1 1 d . C13 C 0.8263(2) 0.69549(4) 0.43246(19) 0.0450(3) Uani 1 1 d . H13 H 0.9920 0.7031 0.5091 0.054 Uiso 1 1 calc R N14 N 0.6560(2) 0.72807(3) 0.36709(18) 0.0499(3) Uani 1 1 d . C15 C 0.4194(3) 0.71620(4) 0.2577(2) 0.0536(3) Uani 1 1 d . H15 H 0.2955 0.7387 0.2083 0.064 Uiso 1 1 calc R C16 C 0.3576(2) 0.67156(4) 0.2180(2) 0.0494(3) Uani 1 1 d . H16 H 0.1903 0.6643 0.1431 0.059 Uiso 1 1 calc R C21 C 0.4446(2) 0.51950(4) 0.24735(18) 0.0430(3) Uani 1 1 d . O21 O 0.2959(2) 0.55605(3) 0.20216(17) 0.0625(3) Uani 1 1 d . H21 H 0.387(4) 0.5829(7) 0.233(3) 0.075 Uiso 1 1 d . O22 O 0.6750(2) 0.52138(3) 0.32653(17) 0.0636(3) Uani 1 1 d . C22 C 0.2906(2) 0.47694(4) 0.18588(19) 0.0460(3) Uani 1 1 d . H22A H 0.2136 0.4786 0.0489 0.055 Uiso 1 1 calc R H22B H 0.1465 0.4760 0.2470 0.055 Uiso 1 1 calc R C23 C 0.4425(2) 0.43271(4) 0.22925(18) 0.0432(3) Uani 1 1 d . H23A H 0.4938 0.4275 0.3663 0.052 Uiso 1 1 calc R H23B H 0.6012 0.4344 0.1844 0.052 Uiso 1 1 calc R C24 C 0.2701(2) 0.39395(4) 0.13017(18) 0.0428(3) Uani 1 1 d . H24A H 0.1049 0.3950 0.1667 0.051 Uiso 1 1 calc R H24B H 0.2300 0.3991 -0.0068 0.051 Uiso 1 1 calc R C25 C 0.3828(2) 0.34706(4) 0.17072(17) 0.0399(2) Uani 1 1 d . O25 O 0.22094(19) 0.31586(3) 0.07598(16) 0.0567(3) Uani 1 1 d . H25 H 0.292(4) 0.2857(7) 0.099(3) 0.068 Uiso 1 1 d . O26 O 0.59359(19) 0.33797(3) 0.27691(15) 0.0567(3) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 N11 0.0399(5) 0.0284(4) 0.0523(6) -0.0017(4) 0.0024(4) -0.0029(4) C12 0.0386(5) 0.0286(5) 0.0444(6) -0.0006(4) 0.0059(4) -0.0008(4) N12 0.0430(6) 0.0340(5) 0.0724(8) 0.0007(5) -0.0013(5) 0.0042(4) C13 0.0413(6) 0.0315(5) 0.0562(7) -0.0045(5) 0.0020(5) -0.0038(4) N14 0.0517(6) 0.0277(5) 0.0653(7) -0.0018(4) 0.0061(5) -0.0009(4) C15 0.0475(7) 0.0324(6) 0.0732(9) 0.0043(5) 0.0015(6) 0.0066(5) C16 0.0378(6) 0.0378(6) 0.0640(8) 0.0023(5) -0.0027(5) 0.0002(5) C21 0.0447(6) 0.0298(5) 0.0501(6) -0.0032(4) 0.0045(5) 0.0003(4) O21 0.0510(5) 0.0264(4) 0.0952(8) -0.0036(4) -0.0084(5) -0.0007(4) O22 0.0452(5) 0.0407(5) 0.0934(8) -0.0068(5) -0.0029(5) -0.0015(4) C22 0.0447(6) 0.0280(5) 0.0573(7) -0.0029(5) -0.0010(5) 0.0010(4) C23 0.0441(6) 0.0287(5) 0.0504(6) -0.0027(4) 0.0006(5) 0.0023(4) C24 0.0444(6) 0.0274(5) 0.0493(6) -0.0027(4) -0.0009(4) 0.0043(4) C25 0.0405(6) 0.0289(5) 0.0453(6) -0.0002(4) 0.0019(4) 0.0017(4) O25 0.0506(5) 0.0274(4) 0.0766(7) -0.0034(4) -0.0119(4) 0.0012(3) O26 0.0479(5) 0.0365(4) 0.0705(6) -0.0017(4) -0.0120(4) 0.0053(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C12 N11 C16 117.51(10) N11 C12 N12 118.92(10) N11 C12 C13 119.69(10) N12 C12 C13 121.38(11) C12 N12 H12A 120.5(11) C12 N12 H12B 118.8(13) H12A N12 H12B 120.6(17) N14 C13 C12 121.75(11) N14 C13 H13 119.1 C12 C13 H13 119.1 C13 N14 C15 117.95(11) N14 C15 C16 120.68(11) N14 C15 H15 119.7 C16 C15 H15 119.7 N11 C16 C15 122.41(12) N11 C16 H16 118.8 C15 C16 H16 118.8 O22 C21 O21 122.85(11) O22 C21 C22 125.76(11) O21 C21 C22 111.39(10) C21 O21 H21 113.6(13) C21 C22 C23 115.97(10) C21 C22 H22A 108.3 C23 C22 H22A 108.3 C21 C22 H22B 108.3 C23 C22 H22B 108.3 H22A C22 H22B 107.4 C22 C23 C24 108.98(9) C22 C23 H23A 109.9 C24 C23 H23A 109.9 C22 C23 H23B 109.9 C24 C23 H23B 109.9 H23A C23 H23B 108.3 C25 C24 C23 115.99(10) C25 C24 H24A 108.3 C23 C24 H24A 108.3 C25 C24 H24B 108.3 C23 C24 H24B 108.3 H24A C24 H24B 107.4 O26 C25 O25 122.96(11) O26 C25 C24 125.55(10) O25 C25 C24 111.48(10) C25 O25 H25 112.5(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N11 C12 1.3264(15) N11 C16 1.3357(16) C12 N12 1.3367(15) C12 C13 1.4099(15) N12 H12A 0.906(19) N12 H12B 0.835(19) C13 N14 1.3088(16) C13 H13 0.9300 N14 C15 1.3351(18) C15 C16 1.3587(18) C15 H15 0.9300 C16 H16 0.9300 C21 O22 1.1982(15) C21 O21 1.3146(15) C21 C22 1.4888(16) O21 H21 0.91(2) C22 C23 1.5100(16) C22 H22A 0.9700 C22 H22B 0.9700 C23 C24 1.5116(16) C23 H23A 0.9700 C23 H23B 0.9700 C24 C25 1.4928(15) C24 H24A 0.9700 C24 H24B 0.9700 C25 O26 1.2027(14) C25 O25 1.3133(14) O25 H25 0.956(19) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N12 H12A O22 0.906(19) 2.261(19) 3.1366(16) 162.3(15) . N12 H12B O26 0.835(19) 2.21(2) 3.0153(15) 161.5(18) 3_766 O21 H21 N11 0.91(2) 1.77(2) 2.6792(13) 173.7(19) . O25 H25 N14 0.956(19) 1.72(2) 2.6551(13) 166.7(17) 2_645 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C16 N11 C12 N12 -178.60(13) C16 N11 C12 C13 0.65(18) N11 C12 C13 N14 -0.9(2) N12 C12 C13 N14 178.35(13) C12 C13 N14 C15 0.2(2) C13 N14 C15 C16 0.8(2) C12 N11 C16 C15 0.2(2) N14 C15 C16 N11 -1.0(2) O22 C21 C22 C23 0.2(2) O21 C21 C22 C23 179.53(12) C21 C22 C23 C24 -170.90(12) C22 C23 C24 C25 -175.32(12) C23 C24 C25 O26 1.5(2) C23 C24 C25 O25 -178.93(12)