#------------------------------------------------------------------------------ #$Date: 2016-03-26 23:02:33 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180527 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/96/7219623.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7219623 loop_ _publ_author_name 'Maddileti, D.' 'Nangia, Ashwini' _publ_section_title ; Polymorphism in anti-hyperammonemic agent N-carbamoyl-l-glutamic acid ; _journal_issue 28 _journal_name_full CrystEngComm _journal_page_first 5252 _journal_paper_doi 10.1039/C5CE00116A _journal_volume 17 _journal_year 2015 _chemical_absolute_configuration rm _chemical_compound_source synthetic _chemical_formula_moiety 'C6 H10 N2 O5' _chemical_formula_sum 'C6 H10 N2 O5' _chemical_formula_weight 190.16 _chemical_melting_point 434 _chemical_name_common 'Carglumic Acid' _chemical_name_systematic ; N-Carbamoyl-L-Glutamic Acid ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2015-02-18 deposited with the CCDC. 2015-02-20 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 90.899(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.3615(5) _cell_length_b 15.8123(15) _cell_length_c 9.9631(9) _cell_measurement_reflns_used 3817 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 25.97 _cell_measurement_theta_min 2.42 _cell_volume 844.54(14) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0286 _diffrn_reflns_av_sigmaI/netI 0.0358 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -19 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 8820 _diffrn_reflns_theta_full 26.06 _diffrn_reflns_theta_max 26.06 _diffrn_reflns_theta_min 2.04 _exptl_absorpt_coefficient_mu 0.131 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.496 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 400 _exptl_crystal_recrystallization_method 'Re-crystallisation from solvent: CH3CN: m-cresol ' _exptl_crystal_size_max 0.26 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.210 _refine_diff_density_min -0.166 _refine_diff_density_rms 0.046 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.6(8) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.049 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 283 _refine_ls_number_reflns 3335 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.049 _refine_ls_R_factor_all 0.0346 _refine_ls_R_factor_gt 0.0323 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0464P)^2^+0.0482P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0777 _refine_ls_wR_factor_ref 0.0790 _reflns_number_gt 3159 _reflns_number_total 3335 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c5ce00116a2.cif _cod_data_source_block CGA-Form-II _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value '434 K' was changed to '434' - the value should be numeric and without a unit designator. '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas Adding full bibliography for 7219622--7219624.cif. ; _cod_original_sg_symbol_H-M P21 _cod_database_code 7219623 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O10 O -0.0085(2) 0.50166(9) -0.12580(12) 0.0206(3) Uani 1 1 d . O3 O 0.7461(2) 0.79317(8) 0.02064(12) 0.0195(3) Uani 1 1 d . O5 O 0.4937(2) 0.81812(9) 0.70877(12) 0.0204(3) Uani 1 1 d . O6 O 0.0252(2) 0.66005(9) 0.08005(13) 0.0215(3) Uani 1 1 d . O4 O 0.3603(2) 0.82830(9) -0.04334(13) 0.0233(3) Uani 1 1 d . N2 N 0.9110(3) 0.80149(11) 0.74357(16) 0.0211(3) Uani 1 1 d D O9 O -0.1318(2) 0.48653(9) 0.62624(13) 0.0227(3) Uani 1 1 d . O1 O 0.5300(2) 0.65953(9) 0.50082(13) 0.0204(3) Uani 1 1 d . N1 N 0.7477(3) 0.81237(11) 0.52982(14) 0.0167(3) Uani 1 1 d . O7 O -0.3351(2) 0.60248(9) 0.14265(13) 0.0231(3) Uani 1 1 d . O8 O 0.2475(2) 0.52823(9) 0.56835(12) 0.0203(3) Uani 1 1 d . O2 O 0.1665(2) 0.71831(9) 0.44250(13) 0.0232(3) Uani 1 1 d . N4 N 0.4113(3) 0.50953(11) -0.15120(16) 0.0221(4) Uani 1 1 d . C12 C 0.2061(3) 0.50693(11) -0.07570(17) 0.0174(4) Uani 1 1 d . N3 N 0.2437(3) 0.50705(10) 0.05826(14) 0.0175(3) Uani 1 1 d . C9 C 0.1359(3) 0.51806(12) 0.29233(16) 0.0167(4) Uani 1 1 d . H9A H 0.2546 0.4723 0.3045 0.020 Uiso 1 1 calc R H9B H 0.2242 0.5709 0.3072 0.020 Uiso 1 1 calc R C3 C 0.6355(3) 0.80488(12) 0.29408(16) 0.0174(4) Uani 1 1 d . H3A H 0.7360 0.8552 0.2816 0.021 Uiso 1 1 calc R H3B H 0.7427 0.7561 0.2820 0.021 Uiso 1 1 calc R C1 C 0.3895(3) 0.72354(12) 0.46242(17) 0.0175(4) Uani 1 1 d . C2 C 0.5366(3) 0.80432(12) 0.43775(17) 0.0167(4) Uani 1 1 d . C8 C 0.0330(3) 0.51610(13) 0.14732(16) 0.0171(4) Uani 1 1 d . C5 C 0.5279(3) 0.80776(12) 0.04786(17) 0.0176(4) Uani 1 1 d . C7 C -0.1135(3) 0.59656(12) 0.12130(17) 0.0180(4) Uani 1 1 d . C6 C 0.7093(3) 0.80974(12) 0.66356(17) 0.0180(4) Uani 1 1 d . C11 C 0.0326(3) 0.50954(12) 0.53773(17) 0.0175(4) Uani 1 1 d . C10 C -0.0681(3) 0.50959(13) 0.39564(16) 0.0189(4) Uani 1 1 d . H10A H -0.1847 0.5561 0.3847 0.023 Uiso 1 1 calc R H10B H -0.1587 0.4574 0.3795 0.023 Uiso 1 1 calc R C4 C 0.4290(3) 0.80313(12) 0.18783(16) 0.0180(4) Uani 1 1 d . H4A H 0.3333 0.7515 0.1974 0.022 Uiso 1 1 calc R H4B H 0.3174 0.8504 0.2022 0.022 Uiso 1 1 calc R H2B H 0.885(4) 0.7981(14) 0.828(2) 0.016(5) Uiso 1 1 d . H12 H 0.378(4) 0.5222(16) 0.090(2) 0.028(6) Uiso 1 1 d . H5 H 0.419(5) 0.8263(18) -0.121(3) 0.041(7) Uiso 1 1 d . H6 H 0.878(4) 0.7876(14) 0.502(2) 0.018(5) Uiso 1 1 d . H13A H 0.399(4) 0.5144(15) -0.238(2) 0.023(5) Uiso 1 1 d . H13B H 0.549(4) 0.5151(14) -0.116(2) 0.021(6) Uiso 1 1 d . H1 H 0.439(4) 0.6193(17) 0.513(2) 0.030(7) Uiso 1 1 d . H11 H -0.073(5) 0.4944(17) 0.716(3) 0.047(7) Uiso 1 1 d . H7 H -0.063(5) 0.7036(17) 0.075(2) 0.031(6) Uiso 1 1 d . H2 H 0.426(4) 0.8511(14) 0.451(2) 0.015(5) Uiso 1 1 d . H8 H -0.074(3) 0.4680(13) 0.1354(18) 0.009(4) Uiso 1 1 d . H2A H 1.046(3) 0.7948(15) 0.707(2) 0.021(6) Uiso 1 1 d D loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O10 0.0172(7) 0.0296(8) 0.0150(6) -0.0003(5) -0.0005(5) -0.0011(6) O3 0.0176(6) 0.0242(7) 0.0167(6) 0.0025(5) 0.0008(5) 0.0034(5) O5 0.0165(6) 0.0292(8) 0.0155(6) -0.0006(6) 0.0008(5) 0.0011(6) O6 0.0180(6) 0.0200(7) 0.0266(7) 0.0040(6) -0.0003(5) 0.0016(6) O4 0.0191(7) 0.0375(8) 0.0132(7) -0.0003(6) -0.0003(5) 0.0037(6) N2 0.0164(8) 0.0329(9) 0.0142(8) 0.0010(7) 0.0021(6) 0.0024(7) O9 0.0204(7) 0.0345(8) 0.0132(6) 0.0006(6) 0.0012(5) -0.0066(6) O1 0.0167(6) 0.0192(7) 0.0253(7) 0.0038(6) 0.0006(5) -0.0016(6) N1 0.0156(7) 0.0205(8) 0.0141(7) -0.0015(7) 0.0025(6) 0.0012(7) O7 0.0153(7) 0.0261(7) 0.0279(7) 0.0015(6) -0.0006(6) 0.0005(5) O8 0.0184(7) 0.0266(7) 0.0160(6) 0.0026(5) -0.0008(5) -0.0039(5) O2 0.0155(6) 0.0291(7) 0.0251(7) -0.0004(6) 0.0004(5) -0.0004(6) N4 0.0177(9) 0.0339(10) 0.0144(8) -0.0023(7) -0.0021(6) -0.0020(7) C12 0.0210(9) 0.0154(9) 0.0158(8) -0.0002(7) 0.0000(7) 0.0007(7) N3 0.0159(8) 0.0212(8) 0.0153(7) -0.0022(6) -0.0014(6) 0.0002(7) C9 0.0169(9) 0.0185(9) 0.0147(8) -0.0005(7) -0.0010(7) -0.0008(7) C3 0.0179(9) 0.0195(9) 0.0150(8) -0.0006(8) 0.0014(7) -0.0014(8) C1 0.0169(9) 0.0240(9) 0.0115(8) -0.0031(7) 0.0021(7) 0.0025(8) C2 0.0175(9) 0.0171(9) 0.0156(8) -0.0012(7) 0.0007(7) 0.0034(8) C8 0.0166(8) 0.0203(9) 0.0142(8) 0.0001(7) 0.0007(7) -0.0030(8) C5 0.0188(9) 0.0159(9) 0.0181(8) -0.0011(8) -0.0021(7) -0.0001(7) C7 0.0184(9) 0.0242(9) 0.0112(8) -0.0014(7) -0.0013(7) -0.0020(8) C6 0.0200(9) 0.0163(10) 0.0177(8) -0.0006(8) 0.0015(7) -0.0010(7) C11 0.0198(9) 0.0170(9) 0.0158(8) -0.0012(7) 0.0010(7) 0.0003(8) C10 0.0169(9) 0.0241(10) 0.0158(8) 0.0011(8) 0.0006(7) -0.0008(8) C4 0.0177(9) 0.0202(9) 0.0160(8) 0.0005(8) 0.0015(7) 0.0002(8) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C7 O6 H7 108.9(17) C5 O4 H5 111.5(17) C6 N2 H2B 116.6(13) C6 N2 H2A 117.4(14) H2B N2 H2A 126(2) C11 O9 H11 112.3(15) C1 O1 H1 107.6(17) C6 N1 C2 119.40(15) C6 N1 H6 116.6(14) C2 N1 H6 112.8(14) C12 N4 H13A 120.6(13) C12 N4 H13B 120.1(15) H13A N4 H13B 118(2) O10 C12 N4 122.38(16) O10 C12 N3 121.21(16) N4 C12 N3 116.36(16) C12 N3 C8 119.95(14) C12 N3 H12 120.2(17) C8 N3 H12 114.9(17) C10 C9 C8 112.50(14) C10 C9 H9A 109.1 C8 C9 H9A 109.1 C10 C9 H9B 109.1 C8 C9 H9B 109.1 H9A C9 H9B 107.8 C4 C3 C2 113.01(15) C4 C3 H3A 109.0 C2 C3 H3A 109.0 C4 C3 H3B 109.0 C2 C3 H3B 109.0 H3A C3 H3B 107.8 O2 C1 O1 123.67(17) O2 C1 C2 122.89(16) O1 C1 C2 113.36(15) N1 C2 C1 111.86(15) N1 C2 C3 108.16(15) C1 C2 C3 110.05(14) N1 C2 H2 109.0(12) C1 C2 H2 107.5(12) C3 C2 H2 110.2(12) N3 C8 C7 112.56(15) N3 C8 C9 107.71(14) C7 C8 C9 108.72(15) N3 C8 H8 108.5(11) C7 C8 H8 109.6(11) C9 C8 H8 109.7(11) O3 C5 O4 122.69(16) O3 C5 C4 123.24(15) O4 C5 C4 114.07(15) O7 C7 O6 123.63(18) O7 C7 C8 122.74(17) O6 C7 C8 113.55(16) O5 C6 N2 122.46(16) O5 C6 N1 120.41(16) N2 C6 N1 117.08(16) O8 C11 O9 122.75(15) O8 C11 C10 123.79(16) O9 C11 C10 113.45(15) C11 C10 C9 112.65(14) C11 C10 H10A 109.1 C9 C10 H10A 109.1 C11 C10 H10B 109.1 C9 C10 H10B 109.1 H10A C10 H10B 107.8 C5 C4 C3 112.44(14) C5 C4 H4A 109.1 C3 C4 H4A 109.1 C5 C4 H4B 109.1 C3 C4 H4B 109.1 H4A C4 H4B 107.8 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O10 C12 1.250(2) O3 C5 1.227(2) O5 C6 1.254(2) O6 C7 1.319(2) O6 H7 0.84(3) O4 C5 1.309(2) O4 H5 0.84(3) N2 C6 1.340(2) N2 H2B 0.86(2) N2 H2A 0.818(16) O9 C11 1.308(2) O9 H11 0.95(3) O1 C1 1.315(2) O1 H1 0.81(3) N1 C6 1.352(2) N1 C2 1.451(2) N1 H6 0.85(2) O7 C7 1.214(2) O8 C11 1.224(2) O2 C1 1.212(2) N4 C12 1.343(2) N4 H13A 0.87(2) N4 H13B 0.82(2) C12 N3 1.347(2) N3 C8 1.454(2) N3 H12 0.82(2) C9 C10 1.520(2) C9 C8 1.539(2) C9 H9A 0.9700 C9 H9B 0.9700 C3 C4 1.520(2) C3 C2 1.534(2) C3 H3A 0.9700 C3 H3B 0.9700 C1 C2 1.523(3) C2 H2 0.96(2) C8 C7 1.515(3) C8 H8 0.96(2) C5 C4 1.502(2) C11 C10 1.507(2) C10 H10A 0.9700 C10 H10B 0.9700 C4 H4A 0.9700 C4 H4B 0.9700