#------------------------------------------------------------------------------ #$Date: 2012-02-28 14:14:52 +0200 (Tue, 28 Feb 2012) $ #$Revision: 35911 $ #$URL: file:///home/coder/svn-repositories/cod/cif/8/10/30/8103099.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_8103099 loop_ _publ_author_name 'Wei-Qiu Kan' 'Jian-Fang Ma' _publ_section_title ; Crystal structure of 1,1'-(1,4-butanediyl)bis(imidazolium) 1,4-butylene- diphosphonate --- 1,4-butylenediphosphonic acid --- water (1:1:2), [C10H16N4][C4H10O6P2] · C4H12O6P2 · 2H2O ; _journal_issue 1 _journal_name_full 'Zeitschrift f\"ur Kristallographie - New Crystal Structures' _journal_page_first 73 _journal_volume 226 _journal_year 2011 _chemical_formula_moiety 'C18 H42 N4 O14 P4' _chemical_formula_sum 'C18 H42 N4 O14 P4' _chemical_formula_weight 662.44 _chemical_melting_point ? _chemical_name_systematic ; 1,1'-(1,4-butanediyl)bis(imidazole) 1,4-Butylenediphosphonate ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2010-11-18 # Formatted by publCIF ; _cell_angle_alpha 69.768(5) _cell_angle_beta 75.004(5) _cell_angle_gamma 88.638(5) _cell_formula_units_Z 1 _cell_length_a 8.420(5) _cell_length_b 9.005(5) _cell_length_c 10.608(5) _cell_measurement_reflns_used 3151 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 29.1575 _cell_measurement_theta_min 3.3222 _cell_volume 727.1(7) _computing_cell_refinement 'CrysAlis ' _computing_data_collection 'CrysAlis [4]' _computing_data_reduction 'CrysAlis ' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution SHELXS-97 _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 10.0 _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Oxford Diffraction Gemini R Ultra' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0240 _diffrn_reflns_av_sigmaI/netI 0.0416 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 5219 _diffrn_reflns_theta_full 26.37 _diffrn_reflns_theta_max 26.37 _diffrn_reflns_theta_min 3.33 _exptl_absorpt_coefficient_mu 0.331 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_correction_T_min 0.93869 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; Oxford Diffraction: CrysAlis [4]. ; _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.513 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 350 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.19 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.558 _refine_diff_density_min -0.520 _refine_diff_density_rms 0.072 _refine_ls_extinction_coef 0.158(9) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.032 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 182 _refine_ls_number_reflns 2975 _refine_ls_number_restraints 3 _refine_ls_restrained_S_all 1.036 _refine_ls_R_factor_all 0.0504 _refine_ls_R_factor_gt 0.0410 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0712P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1100 _refine_ls_wR_factor_ref 0.1136 _reflns_number_gt 2361 _reflns_number_total 2975 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file 1267-3296.cff _[local]_cod_data_source_block a _[local]_cod_cif_authors_sg_H-M p-1 _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value 'not measured' was changed to '?' - the value is undefined or not given. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 8103099 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags P1 P -0.30465(6) -0.07469(6) 0.85666(6) 0.02369(19) Uani 1 1 d . P2 P 0.25784(6) 0.54198(6) 0.19547(5) 0.02357(19) Uani 1 1 d . C1 C 0.7902(3) 0.1381(3) 0.4334(3) 0.0361(6) Uani 1 1 d . H1 H 0.8654 0.1441 0.4824 0.043 Uiso 1 1 calc R C2 C 0.6463(3) 0.0524(3) 0.3252(2) 0.0360(5) Uani 1 1 d . H2 H 0.6060 -0.0123 0.2869 0.043 Uiso 1 1 calc R C3 C 0.5980(3) 0.1954(3) 0.3228(2) 0.0347(5) Uani 1 1 d . H3 H 0.5177 0.2490 0.2825 0.042 Uiso 1 1 calc R C4 C 0.6770(3) 0.4023(3) 0.4109(3) 0.0409(6) Uani 1 1 d . H4A H 0.6974 0.4866 0.3206 0.049 Uiso 1 1 calc R H4B H 0.7612 0.4157 0.4543 0.049 Uiso 1 1 calc R C5 C 0.5102(3) 0.4160(3) 0.5001(3) 0.0344(5) Uani 1 1 d . H5A H 0.4971 0.3437 0.5949 0.041 Uiso 1 1 calc R H5B H 0.4250 0.3858 0.4653 0.041 Uiso 1 1 calc R C6 C -0.0327(2) -0.0051(3) 0.9413(2) 0.0299(5) Uani 1 1 d . H6A H 0.0316 -0.0764 0.9010 0.036 Uiso 1 1 calc R H6B H -0.0180 0.0990 0.8690 0.036 Uiso 1 1 calc R C7 C -0.2135(3) -0.0634(3) 0.9883(2) 0.0305(5) Uani 1 1 d . H7A H -0.2757 0.0062 1.0319 0.037 Uiso 1 1 calc R H7B H -0.2261 -0.1682 1.0594 0.037 Uiso 1 1 calc R C8 C 0.0190(3) 0.5011(3) 0.0663(2) 0.0319(5) Uani 1 1 d . H8A H -0.0517 0.5724 0.1017 0.038 Uiso 1 1 calc R H8B H -0.0058 0.3956 0.1365 0.038 Uiso 1 1 calc R C9 C 0.1985(3) 0.5540(3) 0.0417(2) 0.0302(5) Uani 1 1 d . H9A H 0.2194 0.6630 -0.0224 0.036 Uiso 1 1 calc R H9B H 0.2683 0.4893 -0.0031 0.036 Uiso 1 1 calc R N1 N 0.7661(2) 0.0191(2) 0.3943(2) 0.0349(5) Uani 1 1 d . H1A H 0.8177 -0.0662 0.4098 0.042 Uiso 1 1 calc R N2 N 0.6892(2) 0.2485(2) 0.3912(2) 0.0315(4) Uani 1 1 d . O1 O -0.45805(17) -0.18118(18) 0.91823(16) 0.0340(4) Uani 1 1 d . O2 O -0.3414(2) 0.09408(17) 0.77285(17) 0.0370(4) Uani 1 1 d . H2A H -0.2559 0.1518 0.7394 0.055 Uiso 1 1 calc R O3 O -0.17232(18) -0.13137(18) 0.75392(17) 0.0367(4) Uani 1 1 d . H3A H -0.0897 -0.0698 0.7220 0.055 Uiso 1 1 calc R O4 O 0.17450(18) 0.66199(16) 0.25549(17) 0.0347(4) Uani 1 1 d . O5 O 0.2236(2) 0.37474(16) 0.29795(15) 0.0334(4) Uani 1 1 d . O6 O 0.44938(17) 0.58021(18) 0.14730(16) 0.0334(4) Uani 1 1 d . H6 H 0.4713 0.6711 0.0910 0.050 Uiso 1 1 calc R O1W O 0.0778(2) 0.2510(2) 0.56934(19) 0.0579(6) Uani 1 1 d D H1WA H 0.1218 0.3250 0.4859 0.087 Uiso 1 1 d RD H1WB H 0.0113 0.2973 0.6192 0.087 Uiso 1 1 d RD loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 P1 0.0227(3) 0.0246(3) 0.0273(3) -0.0116(2) -0.0091(2) 0.0005(2) P2 0.0259(3) 0.0209(3) 0.0236(3) -0.0083(2) -0.0056(2) 0.0023(2) C1 0.0296(12) 0.0480(14) 0.0392(13) -0.0226(12) -0.0145(10) 0.0139(10) C2 0.0375(13) 0.0423(13) 0.0341(13) -0.0199(11) -0.0106(10) 0.0052(10) C3 0.0326(12) 0.0435(13) 0.0344(13) -0.0180(11) -0.0147(10) 0.0102(10) C4 0.0339(13) 0.0392(13) 0.0560(16) -0.0273(13) -0.0082(11) 0.0048(10) C5 0.0355(13) 0.0341(12) 0.0373(13) -0.0169(11) -0.0101(10) 0.0058(10) C6 0.0265(11) 0.0391(12) 0.0260(11) -0.0114(10) -0.0103(9) 0.0018(9) C7 0.0282(11) 0.0388(12) 0.0285(11) -0.0137(10) -0.0117(9) 0.0027(9) C8 0.0275(11) 0.0402(13) 0.0270(12) -0.0094(10) -0.0090(9) 0.0022(10) C9 0.0270(11) 0.0350(12) 0.0245(11) -0.0064(10) -0.0055(9) 0.0026(9) N1 0.0357(10) 0.0363(11) 0.0353(11) -0.0154(9) -0.0111(8) 0.0137(8) N2 0.0284(9) 0.0361(10) 0.0348(11) -0.0181(9) -0.0092(8) 0.0074(8) O1 0.0284(8) 0.0392(9) 0.0347(9) -0.0126(8) -0.0086(7) -0.0058(7) O2 0.0437(9) 0.0262(8) 0.0484(10) -0.0123(8) -0.0259(8) 0.0032(7) O3 0.0288(8) 0.0385(9) 0.0453(10) -0.0247(8) 0.0001(7) -0.0049(7) O4 0.0340(8) 0.0266(8) 0.0437(10) -0.0179(7) -0.0030(7) 0.0035(6) O5 0.0517(10) 0.0231(8) 0.0260(8) -0.0096(7) -0.0104(7) 0.0017(7) O6 0.0265(8) 0.0357(9) 0.0373(9) -0.0104(7) -0.0106(7) 0.0042(6) O1W 0.0663(12) 0.0439(11) 0.0380(10) -0.0031(9) 0.0115(9) 0.0251(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1 P1 O2 110.31(9) . . O1 P1 O3 112.20(9) . . O2 P1 O3 106.76(10) . . O1 P1 C7 111.51(10) . . O2 P1 C7 108.64(10) . . O3 P1 C7 107.22(10) . . O5 P2 O4 113.00(10) . . O5 P2 O6 107.57(9) . . O4 P2 O6 109.93(9) . . O5 P2 C9 109.58(10) . . O4 P2 C9 110.73(10) . . O6 P2 C9 105.72(10) . . N1 C1 N2 108.5(2) . . N1 C1 H1 125.7 . . N2 C1 H1 125.7 . . C3 C2 N1 107.1(2) . . C3 C2 H2 126.5 . . N1 C2 H2 126.5 . . C2 C3 N2 107.19(19) . . C2 C3 H3 126.4 . . N2 C3 H3 126.4 . . N2 C4 C5 112.0(2) . . N2 C4 H4A 109.2 . . C5 C4 H4A 109.2 . . N2 C4 H4B 109.2 . . C5 C4 H4B 109.2 . . H4A C4 H4B 107.9 . . C4 C5 C5 111.3(2) . 2_666 C4 C5 H5A 109.4 . . C5 C5 H5A 109.4 2_666 . C4 C5 H5B 109.4 . . C5 C5 H5B 109.4 2_666 . H5A C5 H5B 108.0 . . C6 C6 C7 113.1(2) 2_557 . C6 C6 H6A 109.0 2_557 . C7 C6 H6A 109.0 . . C6 C6 H6B 109.0 2_557 . C7 C6 H6B 109.0 . . H6A C6 H6B 107.8 . . C6 C7 P1 116.77(16) . . C6 C7 H7A 108.1 . . P1 C7 H7A 108.1 . . C6 C7 H7B 108.1 . . P1 C7 H7B 108.1 . . H7A C7 H7B 107.3 . . C9 C8 C8 112.4(2) . 2_565 C9 C8 H8A 109.1 . . C8 C8 H8A 109.1 2_565 . C9 C8 H8B 109.1 . . C8 C8 H8B 109.1 2_565 . H8A C8 H8B 107.8 . . C8 C9 P2 115.16(15) . . C8 C9 H9A 108.5 . . P2 C9 H9A 108.5 . . C8 C9 H9B 108.5 . . P2 C9 H9B 108.5 . . H9A C9 H9B 107.5 . . C1 N1 C2 109.15(18) . . C1 N1 H1A 125.4 . . C2 N1 H1A 125.4 . . C1 N2 C3 108.10(19) . . C1 N2 C4 126.69(19) . . C3 N2 C4 125.20(18) . . P1 O2 H2A 109.5 . . P1 O3 H3A 109.5 . . P2 O6 H6 109.5 . . H1WA O1W H1WB 107.2 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 P1 O1 1.4845(16) . P1 O2 1.5431(16) . P1 O3 1.5553(16) . P1 C7 1.791(2) . P2 O5 1.5030(16) . P2 O4 1.5080(15) . P2 O6 1.5681(17) . P2 C9 1.794(2) . C1 N1 1.312(3) . C1 N2 1.327(3) . C1 H1 0.9300 . C2 C3 1.335(3) . C2 N1 1.364(3) . C2 H2 0.9300 . C3 N2 1.375(3) . C3 H3 0.9300 . C4 N2 1.468(3) . C4 C5 1.506(3) . C4 H4A 0.9700 . C4 H4B 0.9700 . C5 C5 1.517(4) 2_666 C5 H5A 0.9700 . C5 H5B 0.9700 . C6 C6 1.516(4) 2_557 C6 C7 1.519(3) . C6 H6A 0.9700 . C6 H6B 0.9700 . C7 H7A 0.9700 . C7 H7B 0.9700 . C8 C9 1.525(3) . C8 C8 1.526(4) 2_565 C8 H8A 0.9700 . C8 H8B 0.9700 . C9 H9A 0.9700 . C9 H9B 0.9700 . N1 H1A 0.8600 . O2 H2A 0.8200 . O3 H3A 0.8200 . O6 H6 0.8200 . O1W H1WA 0.8937 . O1W H1WB 0.8691 . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N1 H1A O1W 0.86 1.84 2.694(3) 175.1 2_656 O2 H2A O4 0.82 1.85 2.522(2) 138.4 2_566 O3 H3A N1 0.82 2.66 3.387(3) 148.4 2_656 O6 H6 O1 0.82 1.81 2.572(2) 154.4 1_664 O1W H1WA O5 0.89 1.85 2.656(3) 148.7 . O1W H1WB O4 0.87 1.89 2.732(2) 161.9 2_566 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 N1 C2 C3 N2 -0.1(3) . . N2 C4 C5 C5 -170.6(2) . 2_666 C6 C6 C7 P1 178.3(2) 2_557 . O1 P1 C7 C6 160.59(15) . . O2 P1 C7 C6 -77.63(19) . . O3 P1 C7 C6 37.41(19) . . C8 C8 C9 P2 -174.4(2) 2_565 . O5 P2 C9 C8 57.13(19) . . O4 P2 C9 C8 -68.19(19) . . O6 P2 C9 C8 172.78(15) . . N2 C1 N1 C2 -0.1(3) . . C3 C2 N1 C1 0.1(3) . . N1 C1 N2 C3 0.0(3) . . N1 C1 N2 C4 -178.9(2) . . C2 C3 N2 C1 0.0(3) . . C2 C3 N2 C4 179.0(2) . . C5 C4 N2 C1 -116.9(3) . . C5 C4 N2 C3 64.3(3) . .